prot_A-nodosum_M_contig9171.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9171.1.1
Unique Nameprot_A-nodosum_M_contig9171.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length137
Homology
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BLAST of mRNA_A-nodosum_M_contig9171.1.1 vs. uniprot
Match: D8LSC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC8_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 3.810e-39
Identity = 72/117 (61.54%), Postives = 84/117 (71.79%), Query Frame = 0 
Query:   26 WGSICRLSKALTSIR-----QCGQKQGKKKWRQPRMANFLTEADRDELLHSTFFIKMCDDASWLHVEESNHEPEMNWLQSFWGGYKIVPRFQGEVKQNEAHRMVFQCEKGKHTDHIR 137
            W SI +LS+AL S R     Q G  +G+      +  NF TE D DELLHSTFFIKMCDDASWL+VE+   +PE+NWL S WGGYKI PRFQGEVKQNEAHRM+FQ E G+H  H+R
Sbjct:  321 WRSIDKLSRALGSTRRRTSRQGGAARGEGGEGSEQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVR 437
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BLAST of mRNA_A-nodosum_M_contig9171.1.1 vs. uniprot
Match: A0A6H5L805_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L805_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 4.980e-39
Identity = 73/117 (62.39%), Postives = 85/117 (72.65%), Query Frame = 0 
Query:   26 WGSICRLSKALTSIR-----QCGQKQGKKKWRQPRMANFLTEADRDELLHSTFFIKMCDDASWLHVEESNHEPEMNWLQSFWGGYKIVPRFQGEVKQNEAHRMVFQCEKGKHTDHIR 137
            W SI +LS+AL S R     Q G  +G+      +  NF TE D DELLHSTFFIKMCDDASWL+VE+   +PE+NWL S WGGYKI PRFQGEVKQNEAHRM+FQ E G+H DH+R
Sbjct:  522 WRSIDKLSRALGSTRRRTSRQGGAARGEGGEGSEQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRDHVR 638
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9171.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSC8_ECTSI3.810e-3961.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L805_9PHAE4.980e-3962.39Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9171contigA-nodosum_M_contig9171:2539..4034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9171.1.1mRNA_A-nodosum_M_contig9171.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9171 2539..4036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9171.1.1 ID=prot_A-nodosum_M_contig9171.1.1|Name=mRNA_A-nodosum_M_contig9171.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=137bp
AAGSPTSSSARSSSASDDGASGGGAWGSICRLSKALTSIRQCGQKQGKKK
WRQPRMANFLTEADRDELLHSTFFIKMCDDASWLHVEESNHEPEMNWLQS
FWGGYKIVPRFQGEVKQNEAHRMVFQCEKGKHTDHIR
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