prot_A-nodosum_M_contig914.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig914.3.1
Unique Nameprot_A-nodosum_M_contig914.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length112
Homology
BLAST of mRNA_A-nodosum_M_contig914.3.1 vs. uniprot
Match: U9W4Q0_9CYAN (Kinesin light chain 1 (Fragment) n=1 Tax=Leptolyngbya sp. Heron Island J TaxID=1385935 RepID=U9W4Q0_9CYAN)

HSP 1 Score: 57.0 bits (136), Expect = 2.160e-8
Identity = 24/37 (64.86%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 QGKYDDAEPLYKRTLAIHEETLGPRHPLIALSLNNLA 37
            QG+Y++AEPLY+R+L I EE LGP+HP +  SLNNLA
Sbjct:    2 QGRYEEAEPLYQRSLGIREEQLGPQHPDVVTSLNNLA 38          
BLAST of mRNA_A-nodosum_M_contig914.3.1 vs. uniprot
Match: D7G180_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G180_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 4.710e-8
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 QGKYDDAEPLYKRTLAIHEETLGPRHPLIALSLNNLAVVVESQ 43
            QGK+++AEPLY+R+LAI EE  GP HP +A  LNNLA ++E+Q
Sbjct:   81 QGKHEEAEPLYRRSLAIDEEVYGPDHPEVATDLNNLAGLLETQ 123          
BLAST of mRNA_A-nodosum_M_contig914.3.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 4.840e-8
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 QGKYDDAEPLYKRTLAIHEETLGPRHPLIALSLNNLAVVVESQ 43
            QGKYD+A  LY+R+LAI E+ LGP HP +A SLNN AV++ESQ
Sbjct:  831 QGKYDEAGKLYERSLAIREKALGPDHPDVAQSLNNWAVLLESQ 873          
BLAST of mRNA_A-nodosum_M_contig914.3.1 vs. uniprot
Match: UPI001F0F39F4 (tetratricopeptide repeat protein n=1 Tax=Thiorhodococcus mannitoliphagus TaxID=329406 RepID=UPI001F0F39F4)

HSP 1 Score: 57.4 bits (137), Expect = 4.870e-8
Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    1 QGKYDDAEPLYKRTLAIHEETLGPRHPLIALSLNNLA 37
            QG+Y +AEPL KR LA+ EETLGP+HP +A+SL+N+A
Sbjct:    8 QGRYTEAEPLQKRALALREETLGPKHPDVAMSLSNMA 44          
BLAST of mRNA_A-nodosum_M_contig914.3.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 55.5 bits (132), Expect = 6.010e-8
Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    1 QGKYDDAEPLYKRTLAIHEETLGPRHPLIALSLNNLA 37
            QGKY++AEPLY+R L I E  LGP HP +A +LNNLA
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLA 40          
BLAST of mRNA_A-nodosum_M_contig914.3.1 vs. uniprot
Match: A0A6H5K8Z8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z8_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 9.920e-8
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    1 QGKYDDAEPLYKRTLAIHEETLGPRHPLIALSLNN 35
            QGKYDDAE LY+R+LAI E+ LGP HP +A SLNN
Sbjct:   16 QGKYDDAEQLYERSLAIREKVLGPEHPDVAQSLNN 50          
BLAST of mRNA_A-nodosum_M_contig914.3.1 vs. uniprot
Match: A0A0J9EWN6_9CYAN (Kinesin (Fragment) n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0J9EWN6_9CYAN)

HSP 1 Score: 57.8 bits (138), Expect = 1.760e-7
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 QGKYDDAEPLYKRTLAIHEETLGPRHPLIALSLNNLAVVVESQ 43
            QG+Y++AEPLY+R+LAI E+ LG  HP +ALSLNNLA    SQ
Sbjct:   19 QGRYNEAEPLYQRSLAIREKVLGENHPDVALSLNNLASFYLSQ 61          
BLAST of mRNA_A-nodosum_M_contig914.3.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 3.600e-7
Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 QGKYDDAEPLYKRTLAIHEETLGPRHPLIALSLNNLAVVVESQ 43
            QGK+ +AE LYKR+L+I E+  GP HP +A  LNN+AV++ESQ
Sbjct:    6 QGKFHEAESLYKRSLSIDEKVYGPDHPEVAADLNNMAVLMESQ 48          
BLAST of mRNA_A-nodosum_M_contig914.3.1 vs. uniprot
Match: UPI001E5491FA (tetratricopeptide repeat protein n=1 Tax=Pseudanabaena sp. 'Roaring Creek' TaxID=1681830 RepID=UPI001E5491FA)

HSP 1 Score: 53.1 bits (126), Expect = 3.780e-7
Identity = 22/37 (59.46%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 QGKYDDAEPLYKRTLAIHEETLGPRHPLIALSLNNLA 37
            QG+Y +AEPLYK+ +A+ +E LG RHP +A S+NNLA
Sbjct:    5 QGRYKEAEPLYKQAIALMQEILGERHPNVATSINNLA 41          
BLAST of mRNA_A-nodosum_M_contig914.3.1 vs. uniprot
Match: A0A256B9Y9_9CYAN (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Pseudanabaena sp. SR411 TaxID=1980935 RepID=A0A256B9Y9_9CYAN)

HSP 1 Score: 54.7 bits (130), Expect = 4.610e-7
Identity = 23/37 (62.16%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 QGKYDDAEPLYKRTLAIHEETLGPRHPLIALSLNNLA 37
            QG+Y++AEPLYK+ LA+ +E LG RHP +A S+NNLA
Sbjct:    7 QGRYEEAEPLYKQALALTQELLGERHPSVANSINNLA 43          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig914.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
U9W4Q0_9CYAN2.160e-864.86Kinesin light chain 1 (Fragment) n=1 Tax=Leptolyng... [more]
D7G180_ECTSI4.710e-860.47TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K4D0_9PHAE4.840e-865.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001F0F39F44.870e-864.86tetratricopeptide repeat protein n=1 Tax=Thiorhodo... [more]
UPI0013D295286.010e-864.86tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
A0A6H5K8Z8_9PHAE9.920e-871.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0J9EWN6_9CYAN1.760e-762.79Kinesin (Fragment) n=1 Tax=Limnoraphis robusta CS-... [more]
A0A6H5LI51_9PHAE3.600e-758.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001E5491FA3.780e-759.46tetratricopeptide repeat protein n=1 Tax=Pseudanab... [more]
A0A256B9Y9_9CYAN4.610e-762.16Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 72..105
e-value: 0.099
score: 21.8
coord: 30..63
e-value: 0.015
score: 24.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 72..105
score: 8.1424
NoneNo IPR availablePFAMPF13424TPR_12coord: 30..104
e-value: 1.5E-22
score: 79.7
NoneNo IPR availablePFAMPF13374TPR_10coord: 1..27
e-value: 1.9E-7
score: 30.7
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 61..111
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 1..79
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 1..79
coord: 61..111
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..112
e-value: 8.3E-49
score: 168.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig914contigA-nodosum_M_contig914:174464..175348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig914.3.1mRNA_A-nodosum_M_contig914.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig914 174464..175348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig914.3.1 ID=prot_A-nodosum_M_contig914.3.1|Name=mRNA_A-nodosum_M_contig914.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=112bp
QGKYDDAEPLYKRTLAIHEETLGPRHPLIALSLNNLAVVVESQGKYDDSE
PLYKRALAIYEETLGPRHPHVALSMNNLAGLRQSQGKYDDAEPLYKRALA
IREETLGPQHPH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf