prot_A-nodosum_M_contig9121.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9121.1.1
Unique Nameprot_A-nodosum_M_contig9121.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length221
Homology
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BLAST of mRNA_A-nodosum_M_contig9121.1.1 vs. uniprot
Match: A0A6H5KU92_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU92_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 2.970e-16
Identity = 44/62 (70.97%), Postives = 46/62 (74.19%), Query Frame = 0 
Query:    1 MELQARWATRMWGGLVNPPPPTASDAALRESRGVRAKHPRPQFPTDYVDMMEVLAMVAGLIP 62
            MELQARW TRMW G V  P    S AAL+ESR VR   PRPQFPTDYVDMME LA VAGL+P
Sbjct:  859 MELQARWITRMWSGAVPMPTEAESAAALQESRSVRTATPRPQFPTDYVDMMEGLAGVAGLLP 920
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BLAST of mRNA_A-nodosum_M_contig9121.1.1 vs. uniprot
Match: D7FZL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL8_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 4.840e-16
Identity = 44/62 (70.97%), Postives = 46/62 (74.19%), Query Frame = 0 
Query:    1 MELQARWATRMWGGLVNPPPPTASDAALRESRGVRAKHPRPQFPTDYVDMMEVLAMVAGLIP 62
            MELQARW  RMW G V  P  T S AAL+ESR VR   PRPQFPTDYVDMME LA VAGL+P
Sbjct:  434 MELQARWIARMWSGAVPMPTETESAAALQESRSVRTVIPRPQFPTDYVDMMEGLAGVAGLLP 495
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9121.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU92_9PHAE2.970e-1670.97Reverse transcriptase domain-containing protein n=... [more]
D7FZL8_ECTSI4.840e-1670.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9121contigA-nodosum_M_contig9121:5894..10178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9121.1.1mRNA_A-nodosum_M_contig9121.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9121 5700..11742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9121.1.1 ID=prot_A-nodosum_M_contig9121.1.1|Name=mRNA_A-nodosum_M_contig9121.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=221bp
MELQARWATRMWGGLVNPPPPTASDAALRESRGVRAKHPRPQFPTDYVDM
MEVLAMVAGLIPLSSPLLHRQYRSLATGLPYTLQAAPPTSEVRHDTTASL
GADSSKDPRSSIDIDDVLRSPKQRTACVDLLPRGRKTRVVEGSDAILMRG
MDHLVEWMWSGPLLPCHYFILPHLTKDSPTSDGDVIDKFQDHGGGRDGMR
VGLKGALSELRSVNIKYGII*
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