prot_A-nodosum_M_contig912.18.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig912.18.1
Unique Nameprot_A-nodosum_M_contig912.18.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length113
Homology
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A6H5K9R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R2_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 5.520e-45
Identity = 76/109 (69.72%), Postives = 86/109 (78.90%), Query Frame = 0
Query:    4 DNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 112
            DN PSH I  DPD+VAAGTADGW+IRLINQP N P TNILDLGFFN+IQSLQDRTT  TVDE I EV R F  Q  + L +VW + QA+L++I+LAKGDNT KLPHL K
Sbjct:    4 DNKPSHCINADPDVVAAGTADGWDIRLINQPSNIPHTNILDLGFFNAIQSLQDRTTPRTVDEFIIEVKRAFEEQSPSTLDKVWESLQAILQEIILAKGDNTIKLPHLKK 112          
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 1.450e-42
Identity = 76/112 (67.86%), Postives = 87/112 (77.68%), Query Frame = 0
Query:    1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 112
            +Q DN PSH I  DPD+VAAG ADGW+IRLINQP NSPDTNILDLGFFN++QSLQDR T  TVDE I EV R F  Q  +   +VW + QA+L QI+LAKG+NTFKLPHL K
Sbjct:  153 IQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAIL-QIILAKGNNTFKLPHLKK 263          
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A4Q9LUD7_9MICR (Uncharacterized protein (Fragment) n=2 Tax=Hamiltosporidium TaxID=1176354 RepID=A0A4Q9LUD7_9MICR)

HSP 1 Score: 117 bits (294), Expect = 1.750e-31
Identity = 62/112 (55.36%), Postives = 75/112 (66.96%), Query Frame = 0
Query:    1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 112
            VQQDNA  H   +D DIVA G+AD WNI+   QP NSPD N+LDLGFFNSIQSLQ   + +T+DELI  V   F   +   L  V+TT QA +E IMLA G N +K+PH+ K
Sbjct:   18 VQQDNAKPHFSDNDADIVALGSADDWNIKFKAQPANSPDFNVLDLGFFNSIQSLQHEASPHTIDELINCVQDAFHQLEANTLDNVFTTLQACMESIMLADGGNGYKIPHISK 129          
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: V9FUT4_PHYPR (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=V9FUT4_PHYPR)

HSP 1 Score: 117 bits (292), Expect = 4.920e-31
Identity = 58/113 (51.33%), Postives = 76/113 (67.26%), Query Frame = 0
Query:    1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHKQ 113
            +QQDNA  H + DD ++ AAG ADGW I+L+NQP  SPD N LDLGFF SIQSLQ +T   T DELI+E  + F A    +L + + T Q V+E I+  +G N ++L HLHK+
Sbjct:    1 IQQDNARPHVLADDLEVAAAGCADGWAIKLVNQPAQSPDLNCLDLGFFASIQSLQSKTIPRTPDELIKEALQSFQASTAVLLNKTFLTLQHVMEHILKNEGRNNYRLGHLHKE 113          
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA)

HSP 1 Score: 122 bits (307), Expect = 9.080e-31
Identity = 61/112 (54.46%), Postives = 79/112 (70.54%), Query Frame = 0
Query:    1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 112
            VQQDNA  H  VDDP+++AAG  +GWNI+L+ QP  SPD N+LDLGFFN+IQSLQ +TT  T+D+LI+ V   F      VL + + T Q V+E+ M + GDN +KLPHL K
Sbjct:  292 VQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKK 403          
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: W2PNG6_PHYPN (Uncharacterized protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PNG6_PHYPN)

HSP 1 Score: 118 bits (295), Expect = 2.400e-30
Identity = 59/113 (52.21%), Postives = 77/113 (68.14%), Query Frame = 0
Query:    1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHKQ 113
            +QQDNA  H + DD ++ AAG ADGW I+L+NQP  +PD N LDLGFF SIQSLQ +T   T DELI+EV + F A     L + + T Q V+EQI+  +G N ++L HLHK+
Sbjct:  144 IQQDNARPHVLADDLEVAAAGCADGWAIKLVNQPAQNPDLNCLDLGFFASIQSLQSKTIPRTPDELIKEVLQSFQASTAVSLNKTFLTLQHVMEQILKNEGRNNYRLGHLHKE 256          
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A6A4APV1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4APV1_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.800e-29
Identity = 55/112 (49.11%), Postives = 76/112 (67.86%), Query Frame = 0
Query:    1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 112
            ++QDNA  H + +D +++AAG ADGWNIRL NQP  SPD N LDLG+F SIQSLQ  T+  T ++LI+EV   FA      L + + T Q V+++IM  +G N ++LP +HK
Sbjct:   33 IEQDNARPHVLEEDAEVLAAGRADGWNIRLKNQPSQSPDLNCLDLGYFCSIQSLQSHTSPRTTEDLIKEVELTFAETTAETLNKTFLTLQLVMKEIMTNEGRNNYRLPRIHK 144          
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A484KKG0_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KKG0_9ASTE)

HSP 1 Score: 114 bits (286), Expect = 4.920e-29
Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = 0
Query:    1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 112
            +QQDNA  H  V+DP+ V    ADG++I L  QPPNSPD NILDLGFF SIQSLQ +T+   VDEL++ V + +A  +   L  VW +YQ  + +IM  +G N +KL H+ K
Sbjct:  115 IQQDNAKPHIDVNDPEFVQVANADGYSIELTCQPPNSPDLNILDLGFFASIQSLQHQTSTRNVDELVQHVAQAYANLEAKKLNYVWISYQLAMTEIMKVQGGNNYKLAHIGK 226          
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A6A5ABP8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABP8_9STRA)

HSP 1 Score: 115 bits (287), Expect = 5.750e-29
Identity = 55/112 (49.11%), Postives = 73/112 (65.18%), Query Frame = 0
Query:    1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 112
            +QQDNA  H  VDD ++  AGT  GW ++L+ QP  SPD N+LDLGFFNSIQ+LQ R  +  +D+L+  V   F   D   L + + T Q V+E+ +   GDNT+KLPHLHK
Sbjct:  112 IQQDNARPHVQVDDLEVATAGTIGGWRVQLVAQPAMSPDFNVLDLGFFNSIQALQHRQVVTCIDDLVAAVHAAFDELDFRTLDKTFMTLQKVMEESLKVGGDNTYKLPHLHK 223          
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A6A4Z4C8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z4C8_9STRA)

HSP 1 Score: 113 bits (282), Expect = 8.850e-29
Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = 0
Query:    1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 112
            +QQDNA  H  VDDP ++ AG  +GW+IRL  QP  SPD N+L LGFFN+IQ LQ +T+  T+D+LI+ V   F      VL + + T Q V+E+ M  +GDN +KLPHL K
Sbjct:   67 IQQDNAKPHVGVDDPQVMEAGRTNGWSIRLTAQPAQSPDFNVLALGFFNAIQGLQHQTSARTIDDLIKSVQDAFTDLPWRVLDKTFMTLQKVMEESMNVQGDNVYKLPHLRK 178          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9R2_9PHAE5.520e-4569.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGY9_9PHAE1.450e-4267.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4Q9LUD7_9MICR1.750e-3155.36Uncharacterized protein (Fragment) n=2 Tax=Hamilto... [more]
V9FUT4_PHYPR4.920e-3151.33Uncharacterized protein (Fragment) n=2 Tax=Phytoph... [more]
A0A6A5AA16_9STRA9.080e-3154.46Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
W2PNG6_PHYPN2.400e-3052.21Uncharacterized protein n=2 Tax=Phytophthora paras... [more]
A0A6A4APV1_9STRA2.800e-2949.11Uncharacterized protein (Fragment) n=2 Tax=Phytoph... [more]
A0A484KKG0_9ASTE4.920e-2950.00Uncharacterized protein n=1 Tax=Cuscuta campestris... [more]
A0A6A5ABP8_9STRA5.750e-2949.11Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4Z4C8_9STRA8.850e-2950.00Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..104
e-value: 1.8E-19
score: 72.3
NoneNo IPR availablePANTHERPTHR47169OS01G0541250 PROTEINcoord: 1..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig912contigA-nodosum_M_contig912:300907..301245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig912.18.1mRNA_A-nodosum_M_contig912.18.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig912 300907..301245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig912.18.1 ID=prot_A-nodosum_M_contig912.18.1|Name=mRNA_A-nodosum_M_contig912.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=113bp
VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNS
IQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAK
GDNTFKLPHLHKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf