mRNA_A-nodosum_M_contig912.18.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A6H5K9R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R2_9PHAE) HSP 1 Score: 152 bits (384), Expect = 5.520e-45 Identity = 76/109 (69.72%), Postives = 86/109 (78.90%), Query Frame = 1
Query: 10 DNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 336
DN PSH I DPD+VAAGTADGW+IRLINQP N P TNILDLGFFN+IQSLQDRTT TVDE I EV R F Q + L +VW + QA+L++I+LAKGDNT KLPHL K
Sbjct: 4 DNKPSHCINADPDVVAAGTADGWDIRLINQPSNIPHTNILDLGFFNAIQSLQDRTTPRTVDEFIIEVKRAFEEQSPSTLDKVWESLQAILQEIILAKGDNTIKLPHLKK 112
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 150 bits (380), Expect = 1.450e-42 Identity = 76/112 (67.86%), Postives = 87/112 (77.68%), Query Frame = 1
Query: 1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 336
+Q DN PSH I DPD+VAAG ADGW+IRLINQP NSPDTNILDLGFFN++QSLQDR T TVDE I EV R F Q + +VW + QA+L QI+LAKG+NTFKLPHL K
Sbjct: 153 IQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAIL-QIILAKGNNTFKLPHLKK 263
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A4Q9LUD7_9MICR (Uncharacterized protein (Fragment) n=2 Tax=Hamiltosporidium TaxID=1176354 RepID=A0A4Q9LUD7_9MICR) HSP 1 Score: 117 bits (294), Expect = 1.750e-31 Identity = 62/112 (55.36%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 336
VQQDNA H +D DIVA G+AD WNI+ QP NSPD N+LDLGFFNSIQSLQ + +T+DELI V F + L V+TT QA +E IMLA G N +K+PH+ K
Sbjct: 18 VQQDNAKPHFSDNDADIVALGSADDWNIKFKAQPANSPDFNVLDLGFFNSIQSLQHEASPHTIDELINCVQDAFHQLEANTLDNVFTTLQACMESIMLADGGNGYKIPHISK 129
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: V9FUT4_PHYPR (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=V9FUT4_PHYPR) HSP 1 Score: 117 bits (292), Expect = 4.920e-31 Identity = 58/113 (51.33%), Postives = 76/113 (67.26%), Query Frame = 1
Query: 1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHKQ 339
+QQDNA H + DD ++ AAG ADGW I+L+NQP SPD N LDLGFF SIQSLQ +T T DELI+E + F A +L + + T Q V+E I+ +G N ++L HLHK+
Sbjct: 1 IQQDNARPHVLADDLEVAAAGCADGWAIKLVNQPAQSPDLNCLDLGFFASIQSLQSKTIPRTPDELIKEALQSFQASTAVLLNKTFLTLQHVMEHILKNEGRNNYRLGHLHKE 113
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 122 bits (307), Expect = 9.080e-31 Identity = 61/112 (54.46%), Postives = 79/112 (70.54%), Query Frame = 1
Query: 1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 336
VQQDNA H VDDP+++AAG +GWNI+L+ QP SPD N+LDLGFFN+IQSLQ +TT T+D+LI+ V F VL + + T Q V+E+ M + GDN +KLPHL K
Sbjct: 292 VQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKK 403
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: W2PNG6_PHYPN (Uncharacterized protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PNG6_PHYPN) HSP 1 Score: 118 bits (295), Expect = 2.400e-30 Identity = 59/113 (52.21%), Postives = 77/113 (68.14%), Query Frame = 1
Query: 1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHKQ 339
+QQDNA H + DD ++ AAG ADGW I+L+NQP +PD N LDLGFF SIQSLQ +T T DELI+EV + F A L + + T Q V+EQI+ +G N ++L HLHK+
Sbjct: 144 IQQDNARPHVLADDLEVAAAGCADGWAIKLVNQPAQNPDLNCLDLGFFASIQSLQSKTIPRTPDELIKEVLQSFQASTAVSLNKTFLTLQHVMEQILKNEGRNNYRLGHLHKE 256
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A6A4APV1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4APV1_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.800e-29 Identity = 55/112 (49.11%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 336
++QDNA H + +D +++AAG ADGWNIRL NQP SPD N LDLG+F SIQSLQ T+ T ++LI+EV FA L + + T Q V+++IM +G N ++LP +HK
Sbjct: 33 IEQDNARPHVLEEDAEVLAAGRADGWNIRLKNQPSQSPDLNCLDLGYFCSIQSLQSHTSPRTTEDLIKEVELTFAETTAETLNKTFLTLQLVMKEIMTNEGRNNYRLPRIHK 144
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A484KKG0_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KKG0_9ASTE) HSP 1 Score: 114 bits (286), Expect = 4.920e-29 Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = 1
Query: 1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 336
+QQDNA H V+DP+ V ADG++I L QPPNSPD NILDLGFF SIQSLQ +T+ VDEL++ V + +A + L VW +YQ + +IM +G N +KL H+ K
Sbjct: 115 IQQDNAKPHIDVNDPEFVQVANADGYSIELTCQPPNSPDLNILDLGFFASIQSLQHQTSTRNVDELVQHVAQAYANLEAKKLNYVWISYQLAMTEIMKVQGGNNYKLAHIGK 226
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A6A5ABP8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABP8_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.750e-29 Identity = 55/112 (49.11%), Postives = 73/112 (65.18%), Query Frame = 1
Query: 1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 336
+QQDNA H VDD ++ AGT GW ++L+ QP SPD N+LDLGFFNSIQ+LQ R + +D+L+ V F D L + + T Q V+E+ + GDNT+KLPHLHK
Sbjct: 112 IQQDNARPHVQVDDLEVATAGTIGGWRVQLVAQPAMSPDFNVLDLGFFNSIQALQHRQVVTCIDDLVAAVHAAFDELDFRTLDKTFMTLQKVMEESLKVGGDNTYKLPHLHK 223
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Match: A0A6A4Z4C8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z4C8_9STRA) HSP 1 Score: 113 bits (282), Expect = 8.850e-29 Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = 1
Query: 1 VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSIQSLQDRTTLNTVDELIEEVGRVFAAQDVAVLGRVWTTYQAVLEQIMLAKGDNTFKLPHLHK 336
+QQDNA H VDDP ++ AG +GW+IRL QP SPD N+L LGFFN+IQ LQ +T+ T+D+LI+ V F VL + + T Q V+E+ M +GDN +KLPHL K
Sbjct: 67 IQQDNAKPHVGVDDPQVMEAGRTNGWSIRLTAQPAQSPDFNVLALGFFNAIQGLQHQTSARTIDDLIKSVQDAFTDLPWRVLDKTFMTLQKVMEESMNVQGDNVYKLPHLRK 178 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig912.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig912.18.1 >prot_A-nodosum_M_contig912.18.1 ID=prot_A-nodosum_M_contig912.18.1|Name=mRNA_A-nodosum_M_contig912.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=113bp VQQDNAPSHNIVDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLGFFNSback to top mRNA from alignment at A-nodosum_M_contig912:300907..301245+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig912.18.1 ID=mRNA_A-nodosum_M_contig912.18.1|Name=mRNA_A-nodosum_M_contig912.18.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=339bp|location=Sequence derived from alignment at A-nodosum_M_contig912:300907..301245+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig912:300907..301245+ >mRNA_A-nodosum_M_contig912.18.1 ID=mRNA_A-nodosum_M_contig912.18.1|Name=mRNA_A-nodosum_M_contig912.18.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=339bp|location=Sequence derived from alignment at A-nodosum_M_contig912:300907..301245+ (Ascophyllum nodosum dioecious)back to top |