prot_A-nodosum_M_contig910.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig910.11.1
Unique Nameprot_A-nodosum_M_contig910.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length227
Homology
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BLAST of mRNA_A-nodosum_M_contig910.11.1 vs. uniprot
Match: D8LPQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPQ1_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 3.370e-15
Identity = 72/163 (44.17%), Postives = 95/163 (58.28%), Query Frame = 0 
Query:    1 MSQKRLSRALSLERFAAGKDGRVNAYKKKKQANKRKLFEKAQLKRRYAKLLKKEGLANTSSLTHESQQTRCDPTDDIAYTDVEGEPGSSAPSVAERRPEETAVTEDRNQGCSIKEDDGQNRRRVGERKRRREQHAEGTGRTKSEKRETPLQQHRPDPFKEAKA 163
            M++K L +AL+LE+FAAGKDGR NA+KKKKQA KRKLFEKAQLKR+YAKLLKKE +  T+   H     R   +D  A    E   G        R+ +E A   +  +   + +D     R+ GER    +Q AEG  + + +  +    +HRPDPFK AKA
Sbjct:    1 MARKELPQALTLEKFAAGKDGRANAFKKKKQAKKRKLFEKAQLKRQYAKLLKKEAV--TARGEHGPDAPR---SDGAAGVGKEKRAGRLV-LTPNRKWKEEASGGELKRRRELSDD-----RQSGER----QQVAEGRKQEQRKPGKWRRPEHRPDPFKAAKA 148
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig910.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPQ1_ECTSI3.370e-1544.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 158..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..202
IPR013730Fyv7/TAP26PFAMPF08524rRNA_processingcoord: 27..223
e-value: 8.4E-13
score: 48.6
IPR013730Fyv7/TAP26PANTHERPTHR15657UNCHARACTERIZEDcoord: 3..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig910contigA-nodosum_M_contig910:75720..89900 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig910.11.1mRNA_A-nodosum_M_contig910.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig910 75720..90653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig910.11.1 ID=prot_A-nodosum_M_contig910.11.1|Name=mRNA_A-nodosum_M_contig910.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=227bp
MSQKRLSRALSLERFAAGKDGRVNAYKKKKQANKRKLFEKAQLKRRYAKL
LKKEGLANTSSLTHESQQTRCDPTDDIAYTDVEGEPGSSAPSVAERRPEE
TAVTEDRNQGCSIKEDDGQNRRRVGERKRRREQHAEGTGRTKSEKRETPL
QQHRPDPFKEAKAKAEQRRLEKEEAHEERERQRTEKQSKAKQRRKKHALL
SKRTKGGQPVMKHTMQHLLEKIQGQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013730Fyv7/TAP26