prot_A-nodosum_M_contig91.73.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig91.73.1 vs. uniprot
Match: A0A438BR63_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BR63_VITVI) HSP 1 Score: 57.8 bits (138), Expect = 7.120e-8 Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 0
Query: 8 LGRKFKLKDMGDAEYYMGCHITRNRKARELKFDQHLYVESMVKRFNVK--KEAKIPAASGVQTLSKADEPQNPEEKEDM 84
L +F +KD+G+A Y +G I R+R R L Q +Y+++++KR+N++ K +P +GV TLS+ D P+ PEE+E M
Sbjct: 8 LSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERM 85
BLAST of mRNA_A-nodosum_M_contig91.73.1 vs. uniprot
Match: A0A438K5H3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K5H3_VITVI) HSP 1 Score: 57.8 bits (138), Expect = 8.320e-8 Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 0
Query: 8 LGRKFKLKDMGDAEYYMGCHITRNRKARELKFDQHLYVESMVKRFNVK--KEAKIPAASGVQTLSKADEPQNPEEKEDM 84
L +F +KD+G+A Y +G I R+R R L Q +Y+++++KR+N++ K +P +GV TLS+ D P+ PEE+E M
Sbjct: 527 LSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERM 604
BLAST of mRNA_A-nodosum_M_contig91.73.1 vs. uniprot
Match: A0A438JH99_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JH99_VITVI) HSP 1 Score: 57.8 bits (138), Expect = 8.430e-8 Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 0
Query: 8 LGRKFKLKDMGDAEYYMGCHITRNRKARELKFDQHLYVESMVKRFNVK--KEAKIPAASGVQTLSKADEPQNPEEKEDM 84
L +F +KD+G+A Y +G I R+R R L Q +Y+++++KR+N++ K +P +GV TLS+ D P+ PEE+E M
Sbjct: 921 LSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERM 998
BLAST of mRNA_A-nodosum_M_contig91.73.1 vs. uniprot
Match: A0A438KDB5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438KDB5_VITVI) HSP 1 Score: 55.8 bits (133), Expect = 1.660e-7 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 0
Query: 8 LGRKFKLKDMGDAEYYMGCHITRNRKARELKFDQHLYVESMVKRFNVK--KEAKIPAASGVQTLSKADEPQNPEEKEDMK 85
L F +KD+G+A Y +G I R+R LK Q Y+E ++KRFN+ K +K P G SKA PQN +E+E+MK
Sbjct: 2 LSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRAYIERILKRFNMHNCKSSKAPIVKG-DKFSKAQCPQNDDEREEMK 80
BLAST of mRNA_A-nodosum_M_contig91.73.1 vs. uniprot
Match: A0A438FZX1_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FZX1_VITVI) HSP 1 Score: 56.6 bits (135), Expect = 1.850e-7 Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 0
Query: 8 LGRKFKLKDMGDAEYYMGCHITRNRKARELKFDQHLYVESMVKRFNVK--KEAKIPAASGVQTLSKADEPQNPEEKEDMK 85
L F +KD+G+A Y +G I R+R LK Q Y+E ++KRFN+ K K P G SKA PQN +EKE+MK
Sbjct: 100 LSTHFDMKDLGEASYVLGIKILRDRVNGVLKLSQRAYIEKILKRFNMHNCKSTKAPIVKG-DKFSKAQCPQNDDEKEEMK 178
BLAST of mRNA_A-nodosum_M_contig91.73.1 vs. uniprot
Match: A0A438EP48_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EP48_VITVI) HSP 1 Score: 55.5 bits (132), Expect = 2.730e-7 Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query: 8 LGRKFKLKDMGDAEYYMGCHITRNRKARELKFDQHLYVESMVKRFNVK--KEAKIPAASGVQTLSKADEPQNPEEKEDMK 85
L F +KD+G+A Y +G I R+R LK Q Y+E ++KRFN+ K K P G SKA PQN +E+E+MK
Sbjct: 2 LSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRAYIERILKRFNMHNCKSTKAPIVKG-DKFSKAQCPQNDDEREEMK 80
BLAST of mRNA_A-nodosum_M_contig91.73.1 vs. uniprot
Match: A5BTR3_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BTR3_VITVI) HSP 1 Score: 55.8 bits (133), Expect = 3.990e-7 Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query: 8 LGRKFKLKDMGDAEYYMGCHITRNRKARELKFDQHLYVESMVKRFNVK--KEAKIPAASGVQTLSKADEPQNPEEKEDMK 85
L F +KD+G+A Y +G I R+R LK Q Y+E ++KRFN+ K K P G SKA PQN +E+E+MK
Sbjct: 98 LSTHFDMKDLGEASYVLGIKILRDRVNGXLKLSQRAYIEKILKRFNMHNCKSTKTPIVKG-DKFSKAQCPQNDDEREEMK 176
BLAST of mRNA_A-nodosum_M_contig91.73.1 vs. uniprot
Match: A0A438GLX2_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GLX2_VITVI) HSP 1 Score: 55.8 bits (133), Expect = 4.000e-7 Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 0
Query: 1 MNRFAAELGRKFKLKDMGDAEYYMGCHITRNRKARELKFDQHLYVESMVKRFNVK--KEAKIPAASGVQTLSKADEPQNPEEKEDMK 85
M + A + F +KD+G+A Y +G I R+R LK Q Y+E ++KRFN+ K K P G SKA PQN +E+E+MK
Sbjct: 813 MEQPTAHVVTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRAYIEKILKRFNMHNFKSTKAPIVKG-DKFSKAQCPQNDDEREEMK 898
BLAST of mRNA_A-nodosum_M_contig91.73.1 vs. uniprot
Match: A0A438CFA8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CFA8_VITVI) HSP 1 Score: 55.8 bits (133), Expect = 4.030e-7 Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query: 8 LGRKFKLKDMGDAEYYMGCHITRNRKARELKFDQHLYVESMVKRFNVK--KEAKIPAASGVQTLSKADEPQNPEEKEDMK 85
L F +KD+G+A Y +G I R+R LK Q Y+E ++KRFN+ K K P G SKA PQN +E+E+MK
Sbjct: 1006 LSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRAYIEKILKRFNMHNCKSTKAPIVKG-DKFSKAQCPQNDDEREEMK 1084
BLAST of mRNA_A-nodosum_M_contig91.73.1 vs. uniprot
Match: A5BJG5_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Vitis vinifera TaxID=29760 RepID=A5BJG5_VITVI) HSP 1 Score: 55.5 bits (132), Expect = 5.030e-7 Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query: 8 LGRKFKLKDMGDAEYYMGCHITRNRKARELKFDQHLYVESMVKRFNVK--KEAKIPAASGVQTLSKADEPQNPEEKEDMK 85
L F +KD G+A Y +G I R+R LK Q +Y+E ++KRFN+ K K P G SKA PQN +E+E+MK
Sbjct: 52 LSTHFDMKDFGEASYVLGIKILRDRANGVLKLSQRVYIERILKRFNMHNCKSTKAPIVKG-DKFSKAQCPQNDDEREEMK 130 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig91.73.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig91.73.1 ID=prot_A-nodosum_M_contig91.73.1|Name=mRNA_A-nodosum_M_contig91.73.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=85bpback to top |