prot_A-nodosum_M_contig9094.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9094.1.1
Unique Nameprot_A-nodosum_M_contig9094.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length71
Homology
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 69.7 bits (169), Expect = 3.000e-12
Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    2 AFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVF 67
            A+L  ++ EE+++E P+G+ D   +V RL+  +YGL  AG +W+KK   +L   GF R+ ADPCV+
Sbjct:  970 AYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVY 1035          
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: L8H8A7_ACACA (GagPol, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H8A7_ACACA)

HSP 1 Score: 66.2 bits (160), Expect = 2.070e-11
Identity = 31/72 (43.06%), Postives = 47/72 (65.28%), Query Frame = 0
Query:    2 AFLEADVTEELYVELPDGYRDS--PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKH 71
            AFL AD++EE+Y++ P+G+ D   P+ V RLQK++YGL  A L W++     L   GF  ++ DPC++ R H
Sbjct:   96 AFLNADLSEEIYMQQPEGFEDQDHPDYVCRLQKSLYGLKQAPLEWNQTINAYLKKHGFWPTRLDPCIYVRVH 167          
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A6A3YME3_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YME3_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.640e-11
Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    2 AFLEADVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRK 70
            AFL  D  EE+Y++ PDG+  +D+P +   L +A+YG   A   W+ K    L+A+GF RS ADPCV+ R+
Sbjct:  856 AFLYGDAEEEIYMDQPDGFVDQDNPTKKCLLGQALYGTKQAARQWNNKLNQHLVAQGFRRSDADPCVYVRR 926          
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A535FQJ1_9CHLR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535FQJ1_9CHLR)

HSP 1 Score: 65.9 bits (159), Expect = 4.370e-11
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    2 AFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKH 71
            AF  +++ EE+YVELPDGY+ +  +VGRL +A+YGL  + LLW K   G L   G +  + +PC+F   H
Sbjct:   86 AFPNSELDEEVYVELPDGYKLT-GKVGRLLRALYGLRRSPLLWQKLLSGALTELGLQAGKEEPCLFLTDH 154          
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A2R6QB41_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6QB41_9APHY)

HSP 1 Score: 62.4 bits (150), Expect = 1.600e-10
Identity = 29/69 (42.03%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    2 AFLEADVTEELYVELPDGYRDSPNQVG---RLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVF 67
            A+L+ D+ EE+Y++LP+G ++ P + G   RL+KA+YGL  +G  W KK    +   GFE+ QAD C++
Sbjct:   19 AYLQGDLDEEIYMKLPEGIKE-PGKEGWCWRLKKALYGLKQSGRQWKKKLDEAMAKLGFEKGQADECLY 86          
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: Q849B9_ASTYP (Putative gag-pol polyprotein n=1 Tax=Aster yellows phytoplasma TaxID=35779 RepID=Q849B9_ASTYP)

HSP 1 Score: 64.3 bits (155), Expect = 1.620e-10
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    2 AFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVF 67
            AFL+ D+TEE+Y+  P+G    PN+V RL+K++YGL  A  +W+KK    L   G  +S  D CV+
Sbjct:  191 AFLQGDLTEEIYMNQPEGSHQEPNKVCRLRKSIYGLKQASRVWNKKLHSCLTKIGLAQSNFDSCVY 256          
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A2R6QI23_ACTCC (Endonuclease (Fragment) n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QI23_ACTCC)

HSP 1 Score: 63.5 bits (153), Expect = 4.320e-10
Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 0
Query:    2 AFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRK 70
            AFL  D+TEE+Y++LP G   S NQV RL++A+YGL  A   W  KF   +   GF  S  D  +F R+
Sbjct:  428 AFLNGDLTEEVYMQLPPGSSSSSNQVCRLRRALYGLKQAPRAWYAKFSSTICDLGFSASAYDSALFTRQ 496          
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A6H5FV69_9HEMI (Uncharacterized protein n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FV69_9HEMI)

HSP 1 Score: 63.5 bits (153), Expect = 4.430e-10
Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0
Query:    2 AFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRK 70
            AFL+ D+TEE+Y+  P GYRD+ N+V RL+K++YGL  A   W+ K    L   G  +S+ D CV+ ++
Sbjct:  505 AFLQGDLTEEIYMTQPIGYRDNTNRVCRLKKSIYGLKQASRAWNLKLDACLKEIGLLQSKFDTCVYYKR 573          
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A146H916_MYCCL (Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H916_MYCCL)

HSP 1 Score: 63.5 bits (153), Expect = 4.440e-10
Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    2 AFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRK 70
            A+L  ++TEE+Y + P+G+ D  ++V RL K++YGL  +G +W+++        GF R   D CVF R+
Sbjct:  986 AYLNGNLTEEIYTKQPEGFSDGTSRVWRLHKSIYGLPQSGRIWNERLNARFAEMGFRRLLTDRCVFVRR 1054          
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A0V0GHJ8_SOLCH (Putative reverse transcriptase-like n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0GHJ8_SOLCH)

HSP 1 Score: 58.9 bits (141), Expect = 6.360e-10
Identity = 26/69 (37.68%), Postives = 45/69 (65.22%), Query Frame = 0
Query:    2 AFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRK 70
            AFL+ D+ E++Y+ELP G +   N+V +L+K++YGL  A   W+ KF   L++ G+ +S  D  +F ++
Sbjct:    6 AFLQGDLVEDIYMELPLGQKKGENKVCKLRKSLYGLKQASRQWNIKFTDALLSAGYSQSAHDHSLFIKR 74          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C3AKI0_9AGAM3.000e-1242.42Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
L8H8A7_ACACA2.070e-1143.06GagPol, putative n=1 Tax=Acanthamoeba castellanii ... [more]
A0A6A3YME3_9STRA3.640e-1143.66Retrovirus-related Pol polyprotein from transposon... [more]
A0A535FQJ1_9CHLR4.370e-1144.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2R6QB41_9APHY1.600e-1042.03Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q849B9_ASTYP1.620e-1043.94Putative gag-pol polyprotein n=1 Tax=Aster yellows... [more]
A0A2R6QI23_ACTCC4.320e-1044.93Endonuclease (Fragment) n=1 Tax=Actinidia chinensi... [more]
A0A6H5FV69_9HEMI4.430e-1043.48Uncharacterized protein n=2 Tax=Nesidiocoris tenui... [more]
A0A146H916_MYCCL4.440e-1037.68Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473... [more]
A0A0V0GHJ8_SOLCH6.360e-1037.68Putative reverse transcriptase-like n=1 Tax=Solanu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..69
e-value: 5.0E-12
score: 45.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9094contigA-nodosum_M_contig9094:6431..6643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9094.1.1mRNA_A-nodosum_M_contig9094.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9094 6413..6643 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9094.1.1 ID=prot_A-nodosum_M_contig9094.1.1|Name=mRNA_A-nodosum_M_contig9094.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=71bp
MAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGG
ELIAKGFERSQADPCVFRRKH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2