prot_A-nodosum_M_contig9084.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9084.1.1
Unique Nameprot_A-nodosum_M_contig9084.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length308
Homology
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BLAST of mRNA_A-nodosum_M_contig9084.1.1 vs. uniprot
Match: D7FX91_ECTSI (DUF4485 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX91_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 7.030e-52
Identity = 96/148 (64.86%), Postives = 110/148 (74.32%), Query Frame = 0 
Query:   33 RSNAAHPTFESLDEAFCDSLEHIESGYDTLERALK-IRVEAWIVKLNGPHPLPSVAWRKNRNAFAALLARAIEEVDFREPFDKRPPEGSLPTLAPHLRLRIPDRSSSLGRGRTFWGQQRYRLDNVRGRCV-DPSEIAIDPPRTFQRER 178
            R+NAAHP++ESLD  FC  LE +E+ Y TL +A K IRVE WI KLNGP+PLP+VAWRKNRNAFAALLARA+EEVDFREPFD+RPPEGSLPTLAPHLR RIPDR+     G  FW + R  LD  RG    D +  A +  RTFQ  R
Sbjct:   22 RNNAAHPSYESLDAFFCGCLERVEAAYATLNKAFKKIRVECWIAKLNGPYPLPNVAWRKNRNAFAALLARAVEEVDFREPFDRRPPEGSLPTLAPHLRARIPDRNPFQRTGSDFWLRHRAWLDTSRGLSGRDFANEAAEASRTFQPTR 169
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BLAST of mRNA_A-nodosum_M_contig9084.1.1 vs. uniprot
Match: UPI001EE5017A (centrosomal protein of 112 kDa-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5017A)

HSP 1 Score: 55.8 bits (133), Expect = 5.530e-5
Identity = 33/92 (35.87%), Postives = 46/92 (50.00%), Query Frame = 0 
Query:   51 SLEHIESGYDTL------------ERALKIRVEAWIVKLNGPHPLPSVAWRKNRNAFAALLARAIEEVDFREPFDKRPPEGSLPTLAPHLRL 130
            SLE ++S +D +             +A + R   WI KL  P P   V  RKNRN +  L+   +       PFDKRP +GSLPTL P++ +
Sbjct:    7 SLEQLDSEFDKVLADMKPYVLKLPHKADRQRCAVWIKKLCEP-PATGVTGRKNRNMYGQLMLHMLRRGVLEGPFDKRPSDGSLPTLPPYMSI 97
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9084.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FX91_ECTSI7.030e-5264.86DUF4485 domain-containing protein n=1 Tax=Ectocarp... [more]
UPI001EE5017A5.530e-535.87centrosomal protein of 112 kDa-like n=1 Tax=Haliot... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027831Domain of unknown function DUF4485PFAMPF14846DUF4485coord: 44..126
e-value: 3.3E-19
score: 68.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9084contigA-nodosum_M_contig9084:11746..20775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9084.1.1mRNA_A-nodosum_M_contig9084.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9084 8954..20775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9084.1.1 ID=prot_A-nodosum_M_contig9084.1.1|Name=mRNA_A-nodosum_M_contig9084.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=308bp
TTLPTKKYSDASKANRDDSPQVSAEEASAATYRSNAAHPTFESLDEAFCD
SLEHIESGYDTLERALKIRVEAWIVKLNGPHPLPSVAWRKNRNAFAALLA
RAIEEVDFREPFDKRPPEGSLPTLAPHLRLRIPDRSSSLGRGRTFWGQQR
YRLDNVRGRCVDPSEIAIDPPRTFQRERWRGWNTSAATTSSSRRALDGGN
VARRCPSQREWFESSMSSGCTWRAQGEHCFHSPGGSARGKGFLVVECEWC
KGDAAARIQVSLIGGCFETRAGRGLLSQSHVGFFIYSGDRHSKKRSRNKP
FRSRHLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027831DUF4485