prot_A-nodosum_M_contig906.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig906.1.1
Unique Nameprot_A-nodosum_M_contig906.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length186
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig906.1.1 vs. uniprot
Match: D7G7F0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F0_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 7.050e-10
Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 0 
Query:  126 SCQETATTCSNGIIGIEENGVCCPTSCGTCGGAGCSTFTGGPEDCCTRSIWQSGELCDESG 186
            S Q    TC  GI+GI+++ +CC +SCG+CGG GC++  GG E CC   +  SG  C   G
Sbjct:   56 SLQAEVETCDGGIVGIQQSDICCSSSCGSCGGTGCTSRDGGSEACCGGGVRASGRFCSVYG 116
[Close]
BLAST of mRNA_A-nodosum_M_contig906.1.1 vs. uniprot
Match: D8LTS2_ECTSI (Similar to Gram-negative bacteria-binding protein 1, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS2_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 4.250e-9
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0 
Query:  134 CSNGIIGIEENGVCCPTSCGTCGGAGCSTFTGGPEDCCTRSIWQSGELC 182
            C+NG+ GIE +GVCC  SCG CGG+GCS    G   CCT +I + GE+C
Sbjct:  201 CTNGVSGIESDGVCCEISCGQCGGSGCSMRGNGAASCCTSTILEVGEVC 249
[Close]
BLAST of mRNA_A-nodosum_M_contig906.1.1 vs. uniprot
Match: D7G5D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D5_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 5.100e-8
Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 0 
Query:  134 CSNGIIGIEENGVCCPTSCGTCGGAGCSTFTGGPEDCCTRSIWQSGELCDESG 186
            C  GI+GI+++ +CC +SCG+CGG GC++  GG E CC   +  SG  C  +G
Sbjct:  145 CDGGIVGIQQSDICCSSSCGSCGGTGCTSRDGGSEACCGGGVRASGRYCSVTG 197
[Close]
BLAST of mRNA_A-nodosum_M_contig906.1.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 5.360e-8
Identity = 32/58 (55.17%), Postives = 37/58 (63.79%), Query Frame = 0 
Query:  133 TCSNGIIGIEENGV-CCPTSCGTCGGAGCSTFTG----GPEDCCTRSIWQSGELCDES 185
            TCSNG+ GI+ NGV CCP  CG CGGAGC+T       G + CC  SI  S E CDE+
Sbjct:  346 TCSNGVEGIDGNGVVCCPLGCGQCGGAGCTTSGAAAGLGADSCCGGSIKASDEYCDET 403
[Close]
BLAST of mRNA_A-nodosum_M_contig906.1.1 vs. uniprot
Match: D7G3T6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T6_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 5.920e-8
Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 0 
Query:  134 CSNGIIGIEENGVCCPTSCGTCGGAGCSTFTGGPEDCCTRSIWQSGELCDESG 186
            C  GI+GI+++ +CC +SCG+CGG GC++  GG E CC   +  SG  C  +G
Sbjct:   25 CDGGIVGIQQSDICCSSSCGSCGGTGCTSRDGGSEACCGGGVRASGRFCSVTG 77
[Close]
BLAST of mRNA_A-nodosum_M_contig906.1.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.270e-7
Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 0 
Query:  133 TCSNGIIGIEENGV-CCPTSCGTCGGAGCSTFTG----GPEDCCTRSIWQSGELCDESG 186
            TC+NGI GI+ NGV CCP  CG C G GC+ F      G + CC  +I  SG LC E+G
Sbjct:   24 TCTNGIEGIDGNGVVCCPLGCGRCAGEGCTAFGSENGLGADSCCGNAIKASGRLCSETG 82
[Close]
BLAST of mRNA_A-nodosum_M_contig906.1.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 3.750e-7
Identity = 26/53 (49.06%), Postives = 32/53 (60.38%), Query Frame = 0 
Query:  134 CSNGIIGIEENGVCCPTSCGTCGGAGCSTFTGGPEDCCTRSIWQSGELCDESG 186
            C  GI+GI+ + VCC TSCG+CGG GCS   GG   CC   +  SG  C  +G
Sbjct:  270 CDGGIVGIQTSDVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTG 322
[Close]
BLAST of mRNA_A-nodosum_M_contig906.1.1 vs. uniprot
Match: A0A6H5JVC9_9PHAE (AMOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC9_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 5.580e-7
Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 0 
Query:  134 CSNGIIGIEENGVCCPTSCGTCGGAGCSTFTGGPEDCCTRSIWQSGELCDESG 186
            C  GI+GI+ + VCC +SCG+CGG+GC+   GG + CC   +  SG  C  +G
Sbjct:  136 CDGGIVGIQSSDVCCTSSCGSCGGSGCTGRDGGEDACCGGGVRASGRYCSVTG 188
[Close]
BLAST of mRNA_A-nodosum_M_contig906.1.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.700e-6
Identity = 30/62 (48.39%), Postives = 37/62 (59.68%), Query Frame = 0 
Query:  130 TATTCSNGIIGIEENG-VCCPTSCGTCGGAGCSTFTG-----GPEDCCTRSIWQSGELCDES 185
            + TTCSNG+ GI+ NG VCCP  C  CGG+GC T  G     G E CC   +  SG  CD++
Sbjct:  523 SVTTCSNGVQGIDGNGIVCCPMECNQCGGSGC-THAGRAAGLGAESCCGSGVKASGRYCDDT 583
[Close]
BLAST of mRNA_A-nodosum_M_contig906.1.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.710e-6
Identity = 30/61 (49.18%), Postives = 35/61 (57.38%), Query Frame = 0 
Query:  130 TATTCSNGIIGIEENGV-CCPTSCGTCGGAGCSTFTG----GPEDCCTRSIWQSGELCDES 185
            T  TCSNG+ GI+ NGV CCP  C  CGG GC+T       G E CC   I  SG  CD++
Sbjct:  541 TVETCSNGLEGIDGNGVVCCPLECNQCGGTGCTTSGSAAGLGSESCCGGGIKASGAYCDDT 601
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig906.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7G7F0_ECTSI7.050e-1044.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LTS2_ECTSI4.250e-955.10Similar to Gram-negative bacteria-binding protein ... [more]
D7G5D5_ECTSI5.100e-845.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC43_9PHAE5.360e-855.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3T6_ECTSI5.920e-845.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRN1_ECTSI1.270e-750.85Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D7G3U7_ECTSI3.750e-749.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVC9_9PHAE5.580e-745.28AMOP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FUJ9_ECTSI1.700e-648.39Unsaturated glucuronyl hydrolase, family GH88 n=3 ... [more]
D7FQV4_ECTSI1.710e-649.18Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 40..61
e-value: 19.0
score: 11.0
coord: 63..85
e-value: 0.99
score: 18.4
coord: 13..36
e-value: 0.56
score: 19.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..138
e-value: 4.8E-24
score: 86.8
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 42..97
e-value: 3.9E-11
score: 42.5
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 64..85
score: 7.488635
NoneNo IPR availablePANTHERPTHR45842SYNAPTIC ADHESION-LIKE MOLECULE SALMcoord: 2..98
NoneNo IPR availablePANTHERPTHR45842:SF11SUBFAMILY NOT NAMEDcoord: 2..98
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig906contigA-nodosum_M_contig906:164640..168278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig906.1.1mRNA_A-nodosum_M_contig906.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig906 164640..168278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig906.1.1 ID=prot_A-nodosum_M_contig906.1.1|Name=mRNA_A-nodosum_M_contig906.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=186bp
MLTELPDGVFSDLEEMQVLSLVNNKLTELKQDVFYGFADEIVSLRLSDNN
LSELPAGLFSASGSLKYLSLDGNNLMSLPANIFSPLTGLFELDLRGNENL
QCVPTVPESIPPTIIYLPENYDETASCQETATTCSNGIIGIEENGVCCPT
SCGTCGGAGCSTFTGGPEDCCTRSIWQSGELCDESG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt