prot_A-nodosum_M_contig9051.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9051.2.1
Unique Nameprot_A-nodosum_M_contig9051.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length55
Homology
BLAST of mRNA_A-nodosum_M_contig9051.2.1 vs. uniprot
Match: D7FQZ4_ECTSI (Acetohydroxy-acid reductoisomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQZ4_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 4.730e-22
Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0
Query:    1 MVDNCSTTARLGSRKWAPRFDYILEQLGYTAIDEGAPVNEKLISDLFENPVHDAI 55
            MVDNCS TARLGSRKWAPRFDYILEQL YTA+D G+ V++ LISD  ENPVHDAI
Sbjct:  486 MVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNGSAVDDSLISDFLENPVHDAI 540          
BLAST of mRNA_A-nodosum_M_contig9051.2.1 vs. uniprot
Match: A0A835Z8S5_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S5_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.190e-21
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 MVDNCSTTARLGSRKWAPRFDYILEQLGYTAIDEGAPVNEKLISDLFENPVHDAI 55
            MVDNCS TARLGSRKWAPRFDYILEQL YTA+D  AP+N+ LI D   NPVHDAI
Sbjct:  469 MVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAI 523          
BLAST of mRNA_A-nodosum_M_contig9051.2.1 vs. uniprot
Match: W7TPK9_9STRA (Acetohydroxy-acid reductoisomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPK9_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.710e-21
Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    1 MVDNCSTTARLGSRKWAPRFDYILEQLGYTAIDEGAPVNEKLISDLFENPVHDAI 55
            MVDNCS TARLGSRKWAPRFDYIL+QL YTA+D   PVN++LI D  +NPVHDAI
Sbjct:  485 MVDNCSITARLGSRKWAPRFDYILDQLAYTAVDNSVPVNQELIGDFLKNPVHDAI 539          
BLAST of mRNA_A-nodosum_M_contig9051.2.1 vs. uniprot
Match: A0A7S0SWE2_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWE2_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.000e-20
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 MVDNCSTTARLGSRKWAPRFDYILEQLGYTAIDEGAPVNEKLISDLFENPVHDAI 55
            MVDNCSTTARLGSRKWAPRFDYILEQL Y A+D   PV+ KLI D  EN VH+A+
Sbjct:  312 MVDNCSTTARLGSRKWAPRFDYILEQLAYPALDNNVPVDSKLIKDFVENSVHEAV 366          
BLAST of mRNA_A-nodosum_M_contig9051.2.1 vs. uniprot
Match: A0A6A2ZBT9_HIBSY (Acetohydroxy-acid reductoisomerase n=3 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2ZBT9_HIBSY)

HSP 1 Score: 90.5 bits (223), Expect = 7.180e-20
Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 MVDNCSTTARLGSRKWAPRFDYILEQLGYTAIDEGAPVNEKLISDLFENPVHDAI 55
            MVDNCSTTARLGSRKWAPRFDYIL Q  + A+D GAP+N+ LIS  F +PVH+AI
Sbjct:  500 MVDNCSTTARLGSRKWAPRFDYILTQQAFVAVDAGAPINQDLISSFFSDPVHEAI 554          
BLAST of mRNA_A-nodosum_M_contig9051.2.1 vs. uniprot
Match: A0A5N6MP87_9ASTR (Acetohydroxy-acid reductoisomerase n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MP87_9ASTR)

HSP 1 Score: 90.5 bits (223), Expect = 7.300e-20
Identity = 40/55 (72.73%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    1 MVDNCSTTARLGSRKWAPRFDYILEQLGYTAIDEGAPVNEKLISDLFENPVHDAI 55
            MVDNCSTTARLGSRKWAPRFDYIL Q    A+D GAP+N+ LIS+ FE+PVH+A+
Sbjct:  991 MVDNCSTTARLGSRKWAPRFDYILTQQALVAVDNGAPLNQDLISNFFEDPVHEAV 1045          
BLAST of mRNA_A-nodosum_M_contig9051.2.1 vs. uniprot
Match: A0A6V1P0P0_HETAK (Acetohydroxy-acid reductoisomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P0P0_HETAK)

HSP 1 Score: 90.1 bits (222), Expect = 9.590e-20
Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 MVDNCSTTARLGSRKWAPRFDYILEQLGYTAIDEGAPVNEKLISDLFENPVHDAI 55
            MVDNCS TARLGSRKWAPRFDYILEQL YTA+D   PVN++++ D   NPVH A+
Sbjct:  466 MVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNEVPVNQQILDDFVNNPVHTAV 520          
BLAST of mRNA_A-nodosum_M_contig9051.2.1 vs. uniprot
Match: A0A7N0T309_KALFE (Acetohydroxy-acid reductoisomerase n=4 Tax=Pentapetalae TaxID=1437201 RepID=A0A7N0T309_KALFE)

HSP 1 Score: 85.9 bits (211), Expect = 1.710e-19
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 MVDNCSTTARLGSRKWAPRFDYILEQLGYTAIDEGAPVNEKLISDLFENPVHDAI 55
            MVDNCSTTARLGSRKWAPRFDYIL Q    A+D GAP+N+ LIS    +PVH AI
Sbjct:  118 MVDNCSTTARLGSRKWAPRFDYILTQQALVAVDSGAPINQDLISSFLSDPVHGAI 172          
BLAST of mRNA_A-nodosum_M_contig9051.2.1 vs. uniprot
Match: A0A7R9WS80_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WS80_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.710e-19
Identity = 38/55 (69.09%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 MVDNCSTTARLGSRKWAPRFDYILEQLGYTAIDEGAPVNEKLISDLFENPVHDAI 55
            MVDNCS TA+ GSRKWAPRFDYIL+QL YTA+D GAPV+E LI+D  ++ VH A+
Sbjct:  106 MVDNCSFTAKTGSRKWAPRFDYILDQLAYTAVDNGAPVDETLIADFEKHTVHQAV 160          
BLAST of mRNA_A-nodosum_M_contig9051.2.1 vs. uniprot
Match: A0A7C9ANA7_OPUST (Acetohydroxy-acid reductoisomerase n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ANA7_OPUST)

HSP 1 Score: 89.4 bits (220), Expect = 1.840e-19
Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 MVDNCSTTARLGSRKWAPRFDYILEQLGYTAIDEGAPVNEKLISDLFENPVHDAI 55
            MVDNCSTTARLGSRKWAPRFDYIL Q    A+D GAP+N  LIS+ F +PVH+AI
Sbjct:  523 MVDNCSTTARLGSRKWAPRFDYILNQQALVAVDNGAPINRDLISNFFSDPVHEAI 577          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9051.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQZ4_ECTSI4.730e-2280.00Acetohydroxy-acid reductoisomerase n=2 Tax=Ectocar... [more]
A0A835Z8S5_9STRA1.190e-2178.18Acetohydroxy-acid reductoisomerase n=1 Tax=Tribone... [more]
W7TPK9_9STRA1.710e-2176.36Acetohydroxy-acid reductoisomerase n=2 Tax=Monodop... [more]
A0A7S0SWE2_9STRA3.000e-2074.55Acetohydroxy-acid reductoisomerase n=1 Tax=Chromul... [more]
A0A6A2ZBT9_HIBSY7.180e-2072.73Acetohydroxy-acid reductoisomerase n=3 Tax=Hibiscu... [more]
A0A5N6MP87_9ASTR7.300e-2072.73Acetohydroxy-acid reductoisomerase n=1 Tax=Mikania... [more]
A0A6V1P0P0_HETAK9.590e-2070.91Acetohydroxy-acid reductoisomerase n=1 Tax=Heteros... [more]
A0A7N0T309_KALFE1.710e-1970.91Acetohydroxy-acid reductoisomerase n=4 Tax=Pentape... [more]
A0A7R9WS80_9STRA1.710e-1969.09Acetohydroxy-acid reductoisomerase n=1 Tax=Crasped... [more]
A0A7C9ANA7_OPUST1.840e-1972.73Acetohydroxy-acid reductoisomerase n=1 Tax=Opuntia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0133286-phosphogluconate dehydrogenase, domain 2GENE3D1.10.1040.10coord: 1..55
e-value: 5.7E-19
score: 70.8
NoneNo IPR availablePANTHERPTHR21371:SF20KETOL-ACID REDUCTOISOMERASEcoord: 1..55
IPR013023Ketol-acid reductoisomerasePANTHERPTHR21371KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIALcoord: 1..55
IPR000506Ketol-acid reductoisomerase, C-terminalPROSITEPS51851KARI_Ccoord: 1..55
score: 11.531145
IPR0089276-phosphogluconate dehydrogenase-like, C-terminal domain superfamilySUPERFAMILY481796-phosphogluconate dehydrogenase C-terminal domain-likecoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9051contigA-nodosum_M_contig9051:13230..13394 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9051.2.1mRNA_A-nodosum_M_contig9051.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9051 13230..13394 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9051.2.1 ID=prot_A-nodosum_M_contig9051.2.1|Name=mRNA_A-nodosum_M_contig9051.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=55bp
MVDNCSTTARLGSRKWAPRFDYILEQLGYTAIDEGAPVNEKLISDLFENP
VHDAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0133286PGD_dom2
IPR013023KARI
IPR000506KARI_C
IPR0089276-PGluconate_DH-like_C_sf