prot_A-nodosum_M_contig905.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig905.4.1
Unique Nameprot_A-nodosum_M_contig905.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length121
Homology
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BLAST of mRNA_A-nodosum_M_contig905.4.1 vs. uniprot
Match: A0A6H5L0C1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0C1_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 6.980e-22
Identity = 53/89 (59.55%), Postives = 70/89 (78.65%), Query Frame = 0 
Query:    1 MAVKMVEGKGTRVALEEQIDELERREGVLLSALTDEEWAEGVLKKLGITGGKGGKEALLRELNEVVRTSMLDKESARLETMRSAAVNAS 89
            MAVKMVEGKG RVALEE++ EL+R++GVLL +L+DE WAE V K++G  GGK   EA++ E+ +VV  S+LDKE+A LE MR+AA+  S
Sbjct:  100 MAVKMVEGKGARVALEEEMVELQRQQGVLLRSLSDEAWAEDVAKRIGAAGGK---EAVMVEIEKVVAASLLDKETAELEAMRAAALKTS 185
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig905.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L0C1_9PHAE6.980e-2259.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig905contigA-nodosum_M_contig905:76662..83469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig905.4.1mRNA_A-nodosum_M_contig905.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig905 76335..83637 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig905.4.1 ID=prot_A-nodosum_M_contig905.4.1|Name=mRNA_A-nodosum_M_contig905.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=121bp
MAVKMVEGKGTRVALEEQIDELERREGVLLSALTDEEWAEGVLKKLGITG
GKGGKEALLRELNEVVRTSMLDKESARLETMRSAAVNASGDSSRQASKSD
SRGSGNAPPKSATPASKGML*
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