prot_A-nodosum_M_contig903.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig903.20.1
Unique Nameprot_A-nodosum_M_contig903.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length149
Homology
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BLAST of mRNA_A-nodosum_M_contig903.20.1 vs. uniprot
Match: A0A8J5X7A0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7A0_DIALT)

HSP 1 Score: 65.1 bits (157), Expect = 2.110e-9
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:   44 MLLGGDVYGPPGSSGKKLSNFREWAKNQHPLCSMFVAHELYPFTRRERFCVMMCYLCWAVLITAIFE 110
            +LL    YG PG+ G   SN+  +  N+HPL S+  AH L+PFTR ERF +++C  CWA  + +   
Sbjct:  319 LLLENRSYGYPGTDGTLFSNYVAYCLNRHPLVSIVCAHPLHPFTRPERFVILVCSFCWAFYLNSFMR 385
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig903.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8J5X7A0_DIALT2.110e-941.79Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig903contigA-nodosum_M_contig903:139656..146863 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig903.20.1mRNA_A-nodosum_M_contig903.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig903 138996..147286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig903.20.1 ID=prot_A-nodosum_M_contig903.20.1|Name=mRNA_A-nodosum_M_contig903.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=149bp
MTTQSSPRQRGKQEETDAAVGIQVGAPEDQKQITEAQKKRIVQMLLGGDV
YGPPGSSGKKLSNFREWAKNQHPLCSMFVAHELYPFTRRERFCVMMCYLC
WAVLITAIFEAILATCGCAQNLPGGCKRFFECVGSFVLAVLGCLSIIC*
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