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Homology
BLAST of mRNA_A-nodosum_M_contig903.20.1 vs. uniprot
Match: A0A8J5X7A0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7A0_DIALT) HSP 1 Score: 66.6 bits (161), Expect = 8.600e-8 Identity = 39/135 (28.89%), Postives = 61/135 (45.19%), Query Frame = 1
Query: 553 MLLGGDVYGPPGSSGKKLSNFREWAKNQHPLCSMFVAHELYPFTRRERFCVMMCYLCWAVLITA---------------------------IFEAILATCGCAQ----NLPGGCKRFFECVGSFVLAVLGCLSII 864
+LL YG PG+ G SN+ + N+HPL S+ AH L+PFTR ERF +++C CWA + + I ++A C C Q + +R F+ G L ++ CL+++
Sbjct: 319 LLLENRSYGYPGTDGTLFSNYVAYCLNRHPLVSIVCAHPLHPFTRPERFVILVCSFCWAFYLNSFMRFPSIRSQYWVVRYTILAVLVIPYEILIRVVAVCACVQYDDSDRGERKRRIFQRSGHGTLFIVTCLNLV 453
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 227086.JGI_V11_88796 |
| Model size | 1530 |
| Max annot lvl | 2759|Eukaryota |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Evalue | 0.000325 |
| EggNOG OGs | 2E6VX@1|root,2SDIJ@2759|Eukaryota |
| Cds size | 447 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680870348.0292747-UTR-A-nodosum_M_contig903:138995..139655 | 1680870348.0292747-UTR-A-nodosum_M_contig903:138995..139655 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig903 138996..139655 - |
| 1680870348.0836601-UTR-A-nodosum_M_contig903:146863..147286 | 1680870348.0836601-UTR-A-nodosum_M_contig903:146863..147286 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig903 146864..147286 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680870348.0402312-CDS-A-nodosum_M_contig903:139655..139769 | 1680870348.0402312-CDS-A-nodosum_M_contig903:139655..139769 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig903 139656..139769 - |
| 1680870348.051869-CDS-A-nodosum_M_contig903:145407..145563 | 1680870348.051869-CDS-A-nodosum_M_contig903:145407..145563 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig903 145408..145563 - |
| 1680870348.062452-CDS-A-nodosum_M_contig903:146062..146164 | 1680870348.062452-CDS-A-nodosum_M_contig903:146062..146164 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig903 146063..146164 - |
| 1680870348.0739312-CDS-A-nodosum_M_contig903:146788..146863 | 1680870348.0739312-CDS-A-nodosum_M_contig903:146788..146863 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig903 146789..146863 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig903.20.1 >prot_A-nodosum_M_contig903.20.1 ID=prot_A-nodosum_M_contig903.20.1|Name=mRNA_A-nodosum_M_contig903.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=149bp
MTTQSSPRQRGKQEETDAAVGIQVGAPEDQKQITEAQKKRIVQMLLGGDV YGPPGSSGKKLSNFREWAKNQHPLCSMFVAHELYPFTRRERFCVMMCYLC WAVLITAIFEAILATCGCAQNLPGGCKRFFECVGSFVLAVLGCLSIIC* back to topmRNA from alignment at A-nodosum_M_contig903:138996..147286- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig903.20.1 ID=mRNA_A-nodosum_M_contig903.20.1|Name=mRNA_A-nodosum_M_contig903.20.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8291bp|location=Sequence derived from alignment at A-nodosum_M_contig903:138996..147286- (Ascophyllum nodosum dioecious) TCCTCGCCCTCCCCCAATCGTTGAACGGGTCGGAACATGGGCTGCAACGA
CAACTCTTCGTGGGACTTGATCGGGTCTCCCAGACTTCGCTCACGGCAGT
GTACAGATACTTCGTTTTGGACACCATCCCAAATGTCTCGCGGGCCTATT
CCAAGAGGAACATAATATTATGCCGCATTTCCGTAGCGCACGAGCGGTAC
CAGCAAGTACAGTATCGTGATACCCGCAAGTGATTGTCAATTGCTCCGTC
CATTCGCACCTTTCGGTCGATTTCTCTACCTCTATGTCTAGAGTCGAGCA
GGCAAGCTATTTCTTGCCTTCAGGATGCGAGGAGGAACACCACACCAAAT
GATTTGCAGCCTCTCTGATACTGGGTTGTTATCGGGTATTAGATAAAACG
TGTGCAGGTGACTACCAGGCGTGATGACCACACAATCTTCTCCAAGACAG
CGGGGGAAGCAAGAAGAAACCGATGCCGCGGTTGGTATCCAAGTCGGGGT
AAGAATTAGTCTCCAGGAAACGAGACGGTCGAGAGCCGAATTACTGATAT
TTCATAATGACTTGAAAGGGAGGCGTGAGAATAACCATCTCCCCCGAGCC
TGCTTCAGGAAACTGTGTTGATAGCTAGGGTTGGTCGCTTCTGAAGCAAG
GCCTCTCCAGCGCCATGGTCTCGAACGCTCGCAGGTTTAGATCATCCTTG
GACGAGTCTACGGGCATGCAAGTTTGTTCAACGAACTTCCTGTGGCTATC
GACACATCTCGCTCCATATATCAGGACACTTACTTTTGACTGATTGATTG
AATTCTCGCAAAAGCTGATTTCAAAAATCCAGCCCGTGGTCACAAGGTAG
AAAAACACCATCCTGAAGGAAAAAACGCGCGACGTACTCTCCGTAGACAA
TTACCATCGGGGAACCCGTTTAAATGCCATGAAGAGGTTTTGTATTTTCA
GCTATTGATCCCACCTAAACGTTTTGACATTTTTTCCCCCTGACTGGGGG
ATGCTCAGAAGGTCTAGGTGCATTCAGAATTTTCTTTTAAAAAGAGAAAA
CGGCAATGATTGTACAAAAAATAACTCGGAAAAAACTGGTGGAGTATTCT
CTCGACTTTTTTTGCCATTCAGGCCCCTGAAGATCAAAAACAAATCACCG
AGGCACAAAAGAAGCGGATAGTTCAAATGCTACTCGGCGGGGACGTGTAT
GGTCCGCCCGGATCAAGCGGAAAGGTGAGGACCCTTGAAGTTCGCCATGC
CAGGCAGGATGATTGAGTGAGTTAAAGTGTTCGCTTCAACTCAATCTATG
CCGTCGGAAGACGTCAGGTGGCTACGCCTGGTGCTACAGCTATATAGTTA
CTCCAATCGCGCCCTGTCCGTGTCGGATACGTGCGGAGGAGGCTAGGAGC
TAGGCTAAATCGACGTTGTACGCAACGAGAACTTGGTCTGTCTTGGCGTC
GACTGGAATATCGATCGTCATGGCCTGAAATCAAAATACTTCTCGCGAAC
CCATGGATCGGTCGGCATGCTGGCCTCTGTACCTCTGCGGTATGCTTTCG
AATGGCCGTATGTCTTCCACGGAACAGGCCAATGTATGCACTGTACTGTA
CGCATACCATACGCCTCGCCCTAAACAAAGGAGGGTTGTGCCAACATTCT
GGTATTTAGTACTATGGTGGGCGCGAGTGTTGTTAAGTTTTGAGTCTTGC
GACCGGCATCGTTTCTGCCCCAGAAACTGAGCAACTTCCGCGAGTGGGCG
AAGAACCAACACCCACTCTGTAGCATGTTCGTGGCGCACGAGCTGTACCC
CTTCACTCGGCGCGAACGGTTCTGCGTCATGATGTGCTACCTGTGCTGGG
CGGTTCTCATCACCGCTATTTTCGAAGCTGTGAGTATCTAATAGCACGTG
GAGCATTGCCCCCTCTGACTTCACAGTACCGCGAATGACCCACAATGCAA
ATATGCCGTGCAGCACTTTGACCTTCCTTAGCATGCACTAGTCTTTTTGT
TTCGAACTCGAGGCACCTGCATGATGGTCGCGTCTCAGTGCCATTGTCGA
TAGGCACAAGAGGGGGTGTTCAGGATAGATTTGAGATACACCACAAAATT
ACAACGCGCTTCCGCACACACGCACTGCATCACCCTTTTTTGTCACTGGG
TTGCTCCCACACAAGGGGGGATGATATGCCTCGTTATTATCGATGTAAAC
CAAACGATGGTGGATTCCCCAAGAACCGCAGCCCTTTCAGTCCGCGGCGG
CATCTCTCATCGGGTCCTGCTACCGATACCCCTTCAAACAGAACAACCAC
GATGCAGAACAAGTTTGTTGTTCCGGCTGTGAAAACGCGTTTTCCGTACG
AGTGGCCCTAAGGGCTCAACAGATATATATGCGGTCCAGGGCAGTGGAGA
GAACGAAAACAAGGCAAGCTTACCGCTGCGAGCATGCGGGTTCGCTTTCG
CCGTGAAAGTGATACCAGTACACAGCTAATGTAATACTACTCGTAGTACG
TGAATATCTACTATCTACGCTCCTGGCCACGAAATCTTGGGTGCTGTTAT
TAGTACGAAGCAACCTTAGGCCAAAATGTATGTTATTATTCTTTCTTGGC
GATTTTATCGAAATGTTCACCGTAACATCTCCATGATCGAGCACACCCAG
CCGTCGGTGTTCGAGTGTTTCAACGATTGGGGGGGGGCGGGGATACGACG
ACTCCGTCCCCGGGGAGGTCATGGAAACAATCCCTTCCGGAGATAGGTCT
ATATCATCCTCTACATGGTCGGCAAGCTTGCTCCGAACTCAGCTCATTTC
ATCAGGGGTTAGGTCAAATAAATCCCCGGTAGGGGATATTTTCGTGCCGT
CCCCTCCCAAAACGGGGACAAATTTGTGACATCCCCGCCCCCCCTCCCAA
TCGTTGAATTACTCGTTCAACAGTAATTAATGTAAAACCCCCGTCATAAT
CTTGAAGGCGTTTTTGCTATGATAGCACAGAGCAGGGGGTATGGATAGAG
CTACGGGAGCGCAAGGCGTTCGTGAAGCACGGGCTTGCCTCTAAGCGGGT
GTTATATAATGACGTGTGTGATGAGCTAATCGAGGGTGTGTATCCTACTT
AGAAGCTGCAGAGTATATATGGTGTGAGAGCCGATAAGGTTCGCTCAGCA
GAGAAAAAAATGTAAGGAAAAGCTGTGTGAGAAATTTTTAACAGGAATTG
GTGTGATAATAATTACCCATTATTGGCTGAGTTGGAGGTGCGTTGTACAA
AATAAATCCGTATTGGTATACGTGATGTAAAATATGTATTGGTGAAAAAA
AAAGCGACAATGAAGCTGTTTCCCAGAGAAGATGTTATGTATTTGTTGTT
GTTGTTGTTGTTTTCTTCACATTAACCGATCGGGCCTCATCCATACCCAG
TAATATGCGTGGTTGCCAATCCGGAACGTGTTCTGCTGGACAGAAAAAGA
TCAGAGGAACATCTACAAAGCTCCAATGAGAGCAAAAGAAAAACACAAAC
ACACAAAAAACGACAAAGAGAAAAGAACAGGAATAACAAAATACACATGC
CAGAAAAAGATAGACGAGGGGCATTCGATAGAGAGAGTTTGGCATAGTGC
CAACCGCGAGCCATCCGATACCCTCCCCGGCTCGCAACCATGCACCCAAA
AACGCGTAGCATCTACCACATTCCGTACTCTTAGGGTTTCAGTTTTCACT
AACGGCACAATCGACGTCGCTTAGGGAGTCCTTGGGTTGGCCCAATCAAC
GCGGTTCGAAAACGTATCAAGCTTGCTACAGTCACCCCAGGTGCAACCTC
AATCTTGTCCGCCTCTTCCGCCTCTCTCTTCTTCTGCCGTTGATTGGACG
CTATTAATAGATGATATCCATTGTTCTTCTTCACCTACGGTACTGCTTCA
AAATCCGAATGCCCTCAGATGCACCAGGTTTACTTGAGCGATTTCTACAG
GGACGATGTCAAACGTAGAACACACGCCAAGAAAGAGGCTAATAACCTGA
AAACAAGCCGAAGAGAGCAATCTTCATTCGCGATATGAGCCAAACAAAGC
ACGCTTTCTACGCCATGTCATCTGATAAGTAGCGTAAACAACAGAAAAAA
AACGTATACGAGATTGGCATCTCGCTTACAATCAGACAAGTTACAAATGC
TACATATCCGAATGGATAGATAGAAGGGTCGATACCGCACGGTGAACACG
CAGAAAGCAACAACCAAGCAACGGCGTACGGCGGTTGGCTGTAGAATTGT
GTCCCCTACCCGATATAGATAGCTCTACATTGAAATATATTCTAGAACGA
AGTTTGTGTACGGTAAATTCTGTCCGCCAAAAAATTGGTGTCTCTTGAGG
AGTACCAGTCTGCGTGCGACAGCATCCTCGAGTGGTACGTCCTGCCTCTG
ATCATCGCCGCCTGCACCGTACCCTACAGGCAAATCAAACACCAGCACCA
AAAGACATGATTGGATCGCAATAGTGCGCCGATTCCGAGGTAATAAAGCT
TGGAGCTTCACGAAAATGACACAAAATGACGAACCAACTTCAAATCTGCG
CTCCCTGTCTACTCCGATAAGATGGCAGGCCCCACGAGAGGGAGTGTGCT
GGGTTGGTGCAAAGTTTTGCTTTGATGGGGAAATGAAAACACACACTGAC
TTAGGTGGCTTGGGCATGCCGGTGCTCGGACAATCTCTGAAAGTCTCACA
CAGGCATGCAACAAAATAAGTTAGCAAACCTATCCTGGTCTACTATTGGT
CAACATGTAACTACTCTATCCGTATCGTGAACGACCAACGATCAGCCCCC
CATACGAGTGATCGGATAGATACCTAAATAGCCCCCCAAATCCTTTATAT
CCTACGAGATATAAAACAGTCCCCCAGCTATGTCATAACACGAGCATTCA
CACGCCGCGCACAAAAACATGCAGAAATCAACATACGCACATCAGATCGT
CGATCCACCGCAAAGGCAAAACAAACCCACAAAACACTTAAATTCATTAA
GAAATGTCGGTGGATTGCGAACACATCGAATGCTTCGCTACGATGTCCGC
ATGCTGATATTCAGAAGAAAGCGTACTGAAATGTCCTCCTGGGAAACAAG
CTCTCAAAGGAAACTTATTGTACTCAGAACTTTGACACTCAAAGCATACT
CAACTGCTACTCGGCATACTTTGCTATCAATCAACTAACGATCGCCATCT
AGGGCTTTAGTGATACGTAATTTCTCATAATATGCCATATGTTAACCAAA
CCATTGCAACTGTTTAGAATTGTATTCCCAGCAACTCTTTTGCAACCACA
TGAAATTAGCAAGTCGTGCGACCAAAATCAAGCTATTGATATCTCACGCA
TCACAGACATACCGTATCATTTACTGTTTTTATGCGGGCAACCAGATTCT
TGTGACTAGTACTATCAGAAAGTAGCCCTCGCTATCAAAGATTAGGACAA
AAAGATGATTTCGTTATCACGGGATCGTAATCAAGCGAAATTACAAAGAT
CAAAAATCGCTGGTAAAGACGAATGGAAAGCATGGCTTCGATCTCAAAAA
CATACACTCTCATAATCTATCTTCTTCAAAGAGATTGACGAGGGGACTAC
CTCCTCCCCCGCTTGTCACTCAGGTCCAATAGCTAGCGGGGGCATACCTC
TTCCCCCCTTTTACCACGACTCAGGTCCAATGCTGGCGGGGGCATACCTC
CTCCCCTATCCACGACTTAGGTACCTGCCTAGTGACGCAAAATCTCACAT
CCTGCTCTGTAAAGAGTCTACCTCCGGGATGATTTCTGAAGCGATATAAG
ATCAGCCTTTCACTTTTATAAGCTTAACCAGTTATCTTACTACTCTGAAT
TTCAGTCATTTTGCGTACCGTAATGACTTAATACTTCTCATTTCCCAAAC
GAAGGGGTCATAAGCTGCTCCTAAAACGACACCAACAGGCCTCTTCGTCA
TCGGGTTCAAGTGCATAGGTTTTTCCATGGCATAATTAGGATGACCGTAG
GGTCACAACATCCCCACCTGCACATATTTAGTGACAGGGTACGCCTCAAA
CTTTTTCGAATAAATAAGACGATGGAATAACTTGTACCATAACAAACGTC
GTATAAGCACTACTTCTTTATGCTGTAACAAAAATACAGTACTTTAAAAA
CAGAGCTTTGCGGAGGAACAGTGAATCAGCACTGAAATGCTGTTTGATTT
TATTTTATTTTATTTGGTACAGCTTACGAGATAAAAACAGTCACAGGTAA
ACAGCGGTACAACATTTCATGTCAGACTTTGGGGTACTCAAGTCAAGTGA
ACAAGCAATCACAAGCGATACGAAGTATCTCCAGTACGTTCACCGCAAAC
GGAGACTCTCCCCGAACAAACTGCTGCAAATGTACGGGTTCTCGAAAGCA
GTCCTCACTGAACAGGCAAACATCTCCTTCGAGAGCAGGCTACGCGCGAA
TGTCCTAATGCACGAACGCACAGAGTACTGGAGAAAGACGGAGCTATACG
GGGTATTACTTTTGTTCATTACAGCGGTACAGCAAAGCTTGCACAATCCT
TTGACAGCATACCGTTCTGTAGCAGATGAAGAGGTACGAGCAGGCGATGT
TGTCCAGAAAACGAGAATCCTCTCCGATCCTCTCGCGCTCCCAGGCGCTC
CGTGGAGTTCCTTGTCGTCAAGCTGCTCGCTCATTGACGCTCCCCAACAA
CCGATCGCCCCTAGCTTCCAATAACCTCAAGTCGCCCTCGGCGACGTGAC
CTCCGTTCGTCCCTACAGCTTGTGTAGCCTCGGGCCGCCTTTGACGGCGT
GCCCTTATGCTGGCACGGCGTAAATATTTCGCCCGTACCTCTCCTGAAAG
TTGATGCCCTAGTCGTTGGGGTACTCCAAAAAACGCTGCAGCTTCATCCA
GCCCTAAAATTAATCTCTCCACAAAGCAACACGCGCCACGATCCCAAAAA
TGGGCAGGCGCGGAAGCAAATCCATAATCCCCGGGTCCATGAAGCCCTCA
ACAGATGTCCAAGTCGAAATTTTATCCGATCACAAGCTGAAGATTGGCGA
GAGAAAGCTTCTGGAACAACGCTTATGATAGCGTACCTCTCGCAGCCATT
CTTCATGGTGGGTACCAACCAGTCTAGCCCAACAGCATCTTCTTGTGCAT
GTGTTTCATTTCCCCATCAAAGCAAGCCTTGTACCAACCACGCACACTCC
CTCTCGCGAGGCATGTCATACCATCGTGGGTAGAGTCCTTACTTTACGCT
AGAGTAAAGGAAGAACTCTACCCACGATAAGATGGCAGGCTTCACGAGAA
GGAGTGTGCTGGGTTGGTGCAAGGTTGTGCTTTGATAGGGAAATGAAAAC
GCACACAAGAAGATGCTGTCTCACATCTATACCTTCCATTTTCCCGTTAC
CCAACGTCTCCGCCGTTCTTGTCGTGCGCTTAACAAACGGTATTTTTTCT
CGATGCTCTTCCATCATTTTTTTCTTCGTCGATCCCCGGATGCTTTGCCT
CCACGCACCAAATGAAGATACTGGCCACCTGTGGATGTGCACAGAATCTG
CCAGGCGGCTGCAAGAGGTTTTTCGAGTGTGTTGGCAGCTTCGTCTTGGC
GGTCCTTGGGTGCCTCTCCATCATCTGCTAACGAGGGCAATCATCATCTC
GGCGAGTGCTTTCGGCTGAGTATCCGGTGATCAGGGGGGGCACTCCCTAT
GATGTACAAGAGAAACTATCGGTTCATGTACTCCAATGAAGAGAAACGAT
AGTCACTCAAACACACCACGGGCGCCTGTAGATTGGTATTCATTGGCAGC
TGAGTGACCTACTCTATACCTGGTACCGCGTTCTCTAGTGGAGCGATGTT
TTGGGGCTGATCATTCCCGGTTTATGCCTCGACACAGCTGGATCTCGACG
GTGGCTTGTTCCTGGTGACGTACGCAGTGGGTATTGCCGAAAGCTGGTTG
TACTGGCCGTTCATCGCCGGAGCAGTATTCTGGTGGAAGTACGACAAGGC
CAAGCGGAAGTTTGAGGAGCAGAACCCTGGATCTAGAAGTGCTCACGAGT
TTGACATGCATCGATCGATTGCGGTACTCACGAAGTATTATGTACCCGTT
CCTTCCCAGACGTGAGCGCTTCTCGTTTTTTCTATTGTATCATAACCGCG
ACCGCGAAGTTGTCGCCGGGTTGACGTGTAGCTCGTGAACGCCTGCCACC
CATGCATGCTTAACCTTCGGCGCTATAAAGTTATGTTATTATGTTAGAGC
TATCTGTTTTGTAAATCAACGCTTTGAAAATAAAGGAAAAC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig903:138996..147286- >mRNA_A-nodosum_M_contig903.20.1 ID=mRNA_A-nodosum_M_contig903.20.1|Name=mRNA_A-nodosum_M_contig903.20.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=447bp|location=Sequence derived from alignment at A-nodosum_M_contig903:138996..147286- (Ascophyllum nodosum dioecious) ATGACCACACAATCTTCTCCAAGACAGCGGGGGAAGCAAGAAGAAACCGA TGCCGCGGTTGGTATCCAAGTCGGGGCCCCTGAAGATCAAAAACAAATCA CCGAGGCACAAAAGAAGCGGATAGTTCAAATGCTACTCGGCGGGGACGTG TATGGTCCGCCCGGATCAAGCGGAAAGAAACTGAGCAACTTCCGCGAGTG GGCGAAGAACCAACACCCACTCTGTAGCATGTTCGTGGCGCACGAGCTGT ACCCCTTCACTCGGCGCGAACGGTTCTGCGTCATGATGTGCTACCTGTGC TGGGCGGTTCTCATCACCGCTATTTTCGAAGCTATACTGGCCACCTGTGG ATGTGCACAGAATCTGCCAGGCGGCTGCAAGAGGTTTTTCGAGTGTGTTG GCAGCTTCGTCTTGGCGGTCCTTGGGTGCCTCTCCATCATCTGCTAA back to top
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