prot_A-nodosum_M_contig90.26.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig90.26.1
Unique Nameprot_A-nodosum_M_contig90.26.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length62
Homology
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BLAST of mRNA_A-nodosum_M_contig90.26.1 vs. uniprot
Match: A0A6H5K842_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K842_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.570e-10
Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0 
Query:    2 HILCAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDDCRKSGSHDESWSFC 54
            HI  A I+PN V QPD +++KF  M+++V KDY +   + +KSGSHDE +SFC
Sbjct:  367 HITAAQIDPNIVHQPDISYDKFMNMVKEVNKDYGDCHHNMKKSGSHDEWYSFC 419
[Close]
BLAST of mRNA_A-nodosum_M_contig90.26.1 vs. uniprot
Match: A0A6H5KAY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY6_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 3.280e-8
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0 
Query:    6 AGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDDCRKSGSHDESWSFC 54
            A I+PN V  PD +++KF  M+++V KDY +   + +KSGSHDE +SFC
Sbjct:  103 AQIDPNRVHPPDISYDKFMNMVKEVNKDYGDCYHNMKKSGSHDEWYSFC 151
[Close]
BLAST of mRNA_A-nodosum_M_contig90.26.1 vs. uniprot
Match: A0A6H5JQV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV5_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 9.580e-8
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0 
Query:    3 ILCAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDDCRKSGSHDESWSFCGIR 57
            +L A ++PN V QP+ TF+KF TM  ++ KD+ +   + +KSG H+E +SFC ++
Sbjct:   35 VLAACVDPNVVHQPNITFDKFTTMKNEIIKDHGDMYVNFKKSGHHEEMYSFCKVK 89
[Close]
BLAST of mRNA_A-nodosum_M_contig90.26.1 vs. uniprot
Match: A0A6H5KWZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWZ9_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.100e-7
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0 
Query:    8 INPNFVQQPDCTFNKFCTMIRDVTKDYNERDDDCRKSGSHDESWSFC 54
            I+PN V QPD +++KF  M +++ KDY +   + +KSGSHDE +SFC
Sbjct:  304 IDPNTVHQPDISYDKFMNMAKEINKDYGDCHHNMKKSGSHDEWYSFC 350
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig90.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K842_9PHAE1.570e-1050.94Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAY6_9PHAE3.280e-848.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQV5_9PHAE9.580e-841.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWZ9_9PHAE1.100e-748.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig90contigA-nodosum_M_contig90:374430..376518 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig90.26.1mRNA_A-nodosum_M_contig90.26.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig90 372590..376702 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig90.26.1 ID=prot_A-nodosum_M_contig90.26.1|Name=mRNA_A-nodosum_M_contig90.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=62bp
MHILCAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDDCRKSGSHDES
WSFCGIRLDVA*
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