prot_A-nodosum_M_contig9.79.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9.79.1
Unique Nameprot_A-nodosum_M_contig9.79.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length509
Homology
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: D7G9H7_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H7_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 3.290e-44
Identity = 127/296 (42.91%), Postives = 157/296 (53.04%), Query Frame = 0
Query:   35 ERQRALAEAVVRNLNTHELVAIASGRVPAG--LAANG-----------EQRAGVSEETRQSFIKISAGKGGYVPSKAVTDSPRPTLKAGNLDTGNIAAGSSPDLESGLPARD------AARPKSACVVSAEQSCPESHLP----GSAAPGEALPSRQDSEGVAALGSVSPEEAWASKGKGKATGAADSVKETAPGSYSDNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCRADLDKLAKVVQIFPTRSRRSLQRALANTEGNIMAAVDFLLSERGRRGVEPNDG 307
            ERQ+ALAEAVVR ++THELVAIASGR  +G  L + G           EQ AGVS+ETR SF+K+SAGK G  P+  VT    P                         A D      A     +  +  E+S P    P    GS++P  +    + S+                        A   V       YSDNSCSVCL++YEEG +LLQ+TCGHVFH +CID WL +HRVCPCCR DLDKLA+VVQ+FP  S+RSLQ AL   EGNI+ AV+FLL+  G  G  P+ G
Sbjct:    2 ERQQALAEAVVRQMDTHELVAIASGRFGSGGGLLSRGRGRASRRFQQAEQTAGVSQETRMSFVKLSAGKRGLAPAHDVT---APXXXXXXXXXXXXXXXXXXXXXXXXXAADCSGCAWAGGGSKSPTLYYERSNPLCRKPCVGVGSSSPSLSSARPRSSKRFFXXXXXXXXXXXXXXXXXXXXXATRGV-------YSDNSCSVCLDDYEEGDELLQVTCGHVFHRACIDHWLKAHRVCPCCRTDLDKLAQVVQLFPQISKRSLQNALTRAEGNIVLAVEFLLTRPGGDGSTPDAG 287          
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A6H5JXK0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK0_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 7.370e-44
Identity = 133/357 (37.25%), Postives = 170/357 (47.62%), Query Frame = 0
Query:   17 LTRNLCRDPETVQAEAERERQRALAEAVVRNLNTHELVAIASGRVPAG--LAANG-----------EQRAGVSEETRQSFIKISAGKGGYVPSKAVTDSPRPTLKAGNLD-------------------------------------TGNIAAGSSPDLESGLPARDAARPKSACVVSAEQSCPESHLPGSAAPGEALPSRQDSEGVAALGSVSPEEAWASKGKGKATGAADSVKETAPGS----------------YSDNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCRADLDKLAKVVQIFPTRSRRSLQRALANTEGNIMAAVDFLLSERGRRGVEPNDG 307
            +TR LCRDP+ +Q E   ERQ+ALAEAVVR ++THELVAIASGR  +G  L + G           EQ AGVS+ETR SF+K+SAGK G+ P+  VT +P P+     L                                      +  +    S  + S  P+  +ARP+S+             + G +  G                                                              YSDNSCSVCL++YEEG +LLQ+TCGHVFH +CID WLM+HRVCPCCR DLDKLA+VVQ+FP  S+RSLQ AL    GNI+ AV+ LL+  G  G  P+ G
Sbjct:   21 VTRTLCRDPDLLQPEGYMERQQALAEAVVRQMDTHELVAIASGRFGSGGGLLSRGRGRATRRFQQAEQTAGVSQETRMSFVKLSAGKRGHAPAHDVT-APPPSTAVTRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSPTSYYERSNPLCRKPSVGVGSSSPSLSSARPRSSKRF---------FIDGGSGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXLYSDNSCSVCLDDYEEGDELLQVTCGHVFHRACIDHWLMAHRVCPCCRTDLDKLAQVVQLFPQISKRSLQNALTRAGGNIVLAVEILLTRPGGDGSTPDAG 367          
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A4V1IU11_9FUNG (RING-type domain-containing protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4V1IU11_9FUNG)

HSP 1 Score: 67.4 bits (163), Expect = 2.380e-10
Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 0
Query:  210 DNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCR 254
            D  CS+CLE+Y  G++L+ L C HVFH +CI +WL SH+ CP CR
Sbjct:   48 DQRCSICLEDYTRGERLITLPCRHVFHKTCISMWLQSHKECPICR 92          
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: D2VEK0_NAEGR (RING-type domain-containing protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VEK0_NAEGR)

HSP 1 Score: 66.2 bits (160), Expect = 2.480e-10
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  206 GSYSDNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCRADL 257
            G + D SC+VC+ ++EE  +L++L CGHVFH  C+  WL  H  CP CR +L
Sbjct:    2 GEHCDQSCAVCICDFEECDELIRLPCGHVFHKDCVSTWLNEHNTCPTCRYEL 53          
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A447BSG1_PODCO (RING-type domain-containing protein n=2 Tax=Podospora TaxID=5144 RepID=A0A447BSG1_PODCO)

HSP 1 Score: 69.7 bits (169), Expect = 5.610e-10
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 0
Query:  207 SYSDNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRV-CPCCRADLDKLAKVVQIFPTRSRRSLQRALANTE 283
            S + +SC++C E++ EG  + +L+CGH+FH SC+D WL+   V CP CR DL   AK      TR +R+LQR  +  E
Sbjct:  136 STTSHSCAICTEDFVEGGDVRKLSCGHIFHLSCVDPWLLQFAVTCPLCRVDLQ--AKTALNAVTRPQRALQRDTSRVE 211          
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A218WB08_PUNGR (RING-type E3 ubiquitin transferase n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218WB08_PUNGR)

HSP 1 Score: 67.0 bits (162), Expect = 2.110e-9
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  210 DNSCSVCLEEYEEGKQLLQLT-CGHVFHHSCIDLWLMSHRVCPCCRAD 256
            DN+CS+CL E+EEG++L  L  C H FH  CID+WL SH  CP CRAD
Sbjct:   91 DNTCSICLCEFEEGEELRTLPECAHPFHAPCIDMWLYSHASCPMCRAD 138          
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A7S2MEK1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MEK1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.350e-9
Identity = 32/85 (37.65%), Postives = 44/85 (51.76%), Query Frame = 0
Query:  210 DNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCRADLDKLAKVVQIFPTRSRRSLQRALANTEGNIMAAVDFLL 294
            D +C +CL EYE+G ++ QL CGH FH  CID WL +H  CP CR +L        + PT    +  R    +   I  A + +L
Sbjct:   43 DETCPICLVEYEDGDEVRQLPCGHEFHVDCIDSWLEAHTSCPSCRNELSN-----SVTPTSGDSNSSREGGQSTSTIRQATNMML 122          
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A0N5A9D5_9BILA (RING-type domain-containing protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5A9D5_9BILA)

HSP 1 Score: 68.6 bits (166), Expect = 5.510e-9
Identity = 33/85 (38.82%), Postives = 47/85 (55.29%), Query Frame = 0
Query:  210 DNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCRADLDKLAKVVQ------IFPTRSRRSLQRALANTEGNIMA 288
            D  C VC++ Y+ G  +  L C HVFH +C+DLWL+ HR CP C++D+ K+  V++      I   RS   L   +A    NI A
Sbjct:  167 DADCPVCIDPYQTGDIIRSLPCKHVFHKTCVDLWLLEHRTCPMCKSDILKVTHVLRMNRLSAINARRSADQLVDIVAKDCSNIQA 251          
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A485KHK5_9STRA (Aste57867_5857 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KHK5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 6.220e-9
Identity = 39/90 (43.33%), Postives = 49/90 (54.44%), Query Frame = 0
Query:  185 WASKGKGKATGAADSVKE---TAPGSYSDNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLM--SHRVCPCCRADLDKLAKVVQIFPT 269
            W  K    A GAA   K+    A  S +D  CS+CLEEY+E K+++Q  C HVFH  C+  WL   S   CP CRAD+ K   + Q F T
Sbjct:  211 WLKKWWRNAWGAASPAKDINGAATASDADACCSICLEEYDETKEMIQAKCSHVFHEDCLIEWLKLKSSNKCPYCRADILKPTFLQQFFNT 300          
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Match: A0A0N4W5U8_HAEPC (RING-type domain-containing protein n=1 Tax=Haemonchus placei TaxID=6290 RepID=A0A0N4W5U8_HAEPC)

HSP 1 Score: 64.3 bits (155), Expect = 6.240e-9
Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:  210 DNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVCPCCRADLDK 259
            D  C+VC++ Y+ G  +  L C HV+H SCID WL+ HR CP C+AD+ K
Sbjct:   53 DIDCAVCIDPYQTGDVVRTLPCRHVYHKSCIDPWLLEHRTCPMCKADILK 102          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9.79.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9H7_ECTSI3.290e-4442.91RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JXK0_9PHAE7.370e-4437.25RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A4V1IU11_9FUNG2.380e-1055.56RING-type domain-containing protein (Fragment) n=1... [more]
D2VEK0_NAEGR2.480e-1048.08RING-type domain-containing protein (Fragment) n=1... [more]
A0A447BSG1_PODCO5.610e-1043.59RING-type domain-containing protein n=2 Tax=Podosp... [more]
A0A218WB08_PUNGR2.110e-960.42RING-type E3 ubiquitin transferase n=1 Tax=Punica ... [more]
A0A7S2MEK1_9STRA3.350e-937.65Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A0N5A9D5_9BILA5.510e-938.82RING-type domain-containing protein n=1 Tax=Syphac... [more]
A0A485KHK5_9STRA6.220e-943.33Aste57867_5857 protein n=1 Tax=Aphanomyces stellat... [more]
A0A0N4W5U8_HAEPC6.240e-950.00RING-type domain-containing protein n=1 Tax=Haemon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 213..253
e-value: 1.6E-6
score: 37.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 211..254
e-value: 1.3E-12
score: 47.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 213..254
score: 12.961374
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 184..259
e-value: 8.1E-19
score: 69.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 355..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..508
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..341
NoneNo IPR availablePANTHERPTHR45676:SF31RING-H2 FINGER PROTEIN ATL51-RELATEDcoord: 200..258
NoneNo IPR availableCDDcd14279CUEcoord: 258..294
e-value: 3.41667E-5
score: 38.9886
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 213..254
e-value: 2.47784E-20
score: 81.9645
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 208..260
IPR044675E3 ubiquitin-protein ligase RING1-likePANTHERPTHR45676RING-H2 FINGER PROTEIN ATL51-RELATEDcoord: 200..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9contigA-nodosum_M_contig9:1541901..1551088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9.79.1mRNA_A-nodosum_M_contig9.79.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9 1539814..1551220 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9.79.1 ID=prot_A-nodosum_M_contig9.79.1|Name=mRNA_A-nodosum_M_contig9.79.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=509bp
MAETLRHARTLVALRDLTRNLCRDPETVQAEAERERQRALAEAVVRNLNT
HELVAIASGRVPAGLAANGEQRAGVSEETRQSFIKISAGKGGYVPSKAVT
DSPRPTLKAGNLDTGNIAAGSSPDLESGLPARDAARPKSACVVSAEQSCP
ESHLPGSAAPGEALPSRQDSEGVAALGSVSPEEAWASKGKGKATGAADSV
KETAPGSYSDNSCSVCLEEYEEGKQLLQLTCGHVFHHSCIDLWLMSHRVC
PCCRADLDKLAKVVQIFPTRSRRSLQRALANTEGNIMAAVDFLLSERGRR
GVEPNDGARAAAGSGLITSEAARPSQASDRPPGTSRSTGEELICGLVSLP
LERDGAAFGGSTSGGPANDSARDPDAVGLRPESRPSSASAAAGLFRLSFG
RTRPRDAEAVSGATSSQAPQLAAVTATGGATGGIVGGGNRSAEGIRSMAV
MVDEEMGTSFSQQVGMAIARALQQRSSPEPSSDAAELHQRLGDTTASPCP
PGRLEANV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR044675RING1-like