prot_A-nodosum_M_contig9.104.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9.104.2
Unique Nameprot_A-nodosum_M_contig9.104.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length863
Homology
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BLAST of mRNA_A-nodosum_M_contig9.104.2 vs. uniprot
Match: D7FJI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI5_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 6.200e-24
Identity = 81/196 (41.33%), Postives = 100/196 (51.02%), Query Frame = 0 
Query:  581 QRRASKTCEQGEDND--EEWRQRGRGLWATYVEPTSRAASAALRE-PYEFKHPETQDALTGRLRLQSGRPYHGLYARSLQANGLEPAYFRTSLCSISDRHCRYLTGFDAAVSGREAPSNSCRLNLDDSVIERDSRAGDPLAEACSRAPTQGLSDKLEAGRVRASFNSRAKLLGIEPPTPLRTEAAWMAKSGDSQYR 773
            +R  +K  +  E+N   E W  RGR LWAT+ EP +RA S   R  P       +Q  +         RPY+GLYARSLQANG+EPA+FR+S CS      R + G                     SV+  D         A +R+P  GL D+LEAGRV  SF  RA+LLG  PPT LR + AWM K GD QYR
Sbjct:  473 ERITAKKKDVNEENHHRERWSTRGRVLWATHAEPAARATSTDARIFPRATMRSCSQPVV---------RPYNGLYARSLQANGIEPAHFRSSRCSCHTTEHRQIDG---------------------SVLWPDRENA-----ARTRSPVDGLPDRLEAGRVLDSFERRAELLGKMPPTTLRAKTAWMEKPGDPQYR 633
[Close]
BLAST of mRNA_A-nodosum_M_contig9.104.2 vs. uniprot
Match: A0A6H5L0G8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0G8_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 2.320e-23
Identity = 81/196 (41.33%), Postives = 97/196 (49.49%), Query Frame = 0 
Query:  581 QRRASKTCEQGEDND--EEWRQRGRGLWATYVEPTSRAASAALR-EPYEFKHPETQDALTGRLRLQSGRPYHGLYARSLQANGLEPAYFRTSLCSISDRHCRYLTGFDAAVSGREAPSNSCRLNLDDSVIERDSRAGDPLAEACSRAPTQGLSDKLEAGRVRASFNSRAKLLGIEPPTPLRTEAAWMAKSGDSQYR 773
            +R  +K  +  E+N   E W  RGR LWAT+ EP +RA     R  P       +Q  L         RPYHGLYARSLQANG+EPA  R+S CS      R + G                     SV+  D         A +R+P  GL D+LEAGRV  SF  RA+LLG  PPT LR + AWM K GD QYR
Sbjct:  461 ERITAKEDDVNEENQQRERWSTRGRVLWATHAEPAARATCTDSRIYPRATMQSCSQPVL---------RPYHGLYARSLQANGIEPAKIRSSRCSCHTTDNRQIDG---------------------SVLWPDRENA-----ARTRSPVDGLPDRLEAGRVLDSFERRAELLGKMPPTTLRAKTAWMEKPGDPQYR 621
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9.104.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJI5_ECTSI6.200e-2441.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0G8_9PHAE2.320e-2341.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9contigA-nodosum_M_contig9:1887459..1897667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9.104.2mRNA_A-nodosum_M_contig9.104.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9 1885775..1897941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9.104.2 ID=prot_A-nodosum_M_contig9.104.2|Name=mRNA_A-nodosum_M_contig9.104.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=863bp
MDRAMDRAMDRTTDRPMDRTMDRTMDRAMDRAMDRTMDRTMDETTLQQAS
VLTSAGETPGAPRERREMNHSGLTNQALAAILEDGIRERHYLENRFHNLC
RVILQLGSASHASHASLGEERDGSNGENRRKPSGVMTTSRSRSDNDVGEG
QVTSSFNAASYTGPRLASPRQTARASPTRREVALQANERLDKKLQDDGGR
GSRSVSIENRWKAAATTEASSRGSLERERSVERSCLRTPKALASCACVSG
LKGKPEGTIDTQGAESTREKGKSFRDQESFDTKRGQRGENEDEARQRSPA
RVFTSGESDARGLGLSSGRRVRRRAKRQLVEKCSSPTTTSCQSSPCHFEE
RRNPSSILETLNLWGRGTSADGLERERAASRAWARGVTFKAKNVQDLEVR
LDAESVFVLDSDSESAIWRCTEGTNRRRVDASTSGRRIRNRRRGNGYTGD
DAVKEARRDDCLTSNATVERERSHAVTPTVGVHVHLGKPKASSQEERGAS
VRAYDYRLGKTIPASSATEKLNGNLRGGEASGYPVAGFAQRDDERFTMGE
PDGGGGMGTKDDAFCHRHGWDGTINGAVCDQRRASKTCEQGEDNDEEWRQ
RGRGLWATYVEPTSRAASAALREPYEFKHPETQDALTGRLRLQSGRPYHG
LYARSLQANGLEPAYFRTSLCSISDRHCRYLTGFDAAVSGREAPSNSCRL
NLDDSVIERDSRAGDPLAEACSRAPTQGLSDKLEAGRVRASFNSRAKLLG
IEPPTPLRTEAAWMAKSGDSQYRLVEGSRGLLNSLCSSYNPPSAAIRAGQ
AEVRSGSYASGTGHGGRPSFPAMATTLMVTAADFWNNRRKQIGAGQPYER
LRATRLAKTSNL*
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