prot_A-nodosum_M_contig8989.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8989.1.1
Unique Nameprot_A-nodosum_M_contig8989.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length174
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig8989.1.1 vs. uniprot
Match: A0A6H5KNI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI2_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 3.160e-5
Identity = 44/107 (41.12%), Postives = 59/107 (55.14%), Query Frame = 0 
Query:   49 EKNREANREAELLRAEDEEAEEGRDPVERDEMARQDSKKPRAVVKEKKMLKKPKEVERDNMCEAMRLMSEVHNSSIAAAMAETRSYGKQKEEWERNMMELEATESAP 155
            +KNR  +++AEL R E+      RDPVE     R++SK+ +A   E+  LKK  E ERD+M EAM  M+  H  SI AAM  T     +KE W +     +AT  AP
Sbjct: 2463 QKNRIVHQQAELQRVEEXXXXXXRDPVEXXXTLRRESKQRKAEDDEQLRLKKQAEQERDDMIEAMWTMNYTHRKSIKAAMERTHKRYIRKEAWLKERQRRDATRLAP 2569
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8989.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNI2_9PHAE3.160e-541.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
NoneNo IPR availableCOILSCoilCoilcoord: 44..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8989contigA-nodosum_M_contig8989:2693..8315 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8989.1.1mRNA_A-nodosum_M_contig8989.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8989 2693..8317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8989.1.1 ID=prot_A-nodosum_M_contig8989.1.1|Name=mRNA_A-nodosum_M_contig8989.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=174bp
WVERGDLKIVAKPEEDWKQVDEWNHLSQHDNFLLVEENHNTSTTNNSTEK
NREANREAELLRAEDEEAEEGRDPVERDEMARQDSKKPRAVVKEKKMLKK
PKEVERDNMCEAMRLMSEVHNSSIAAAMAETRSYGKQKEEWERNMMELEA
TESAPPSFKSRGSREHTSDSHWGT
back to top