prot_A-nodosum_M_contig8986.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8986.1.1
Unique Nameprot_A-nodosum_M_contig8986.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length273
Homology
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BLAST of mRNA_A-nodosum_M_contig8986.1.1 vs. uniprot
Match: D8LTP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP0_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 1.800e-9
Identity = 73/248 (29.44%), Postives = 98/248 (39.52%), Query Frame = 0 
Query:    1 MIAAGLIYSNTYGHGLENTRHFYKFADSVLEAS--------------------------------------RERRSSSTLPSWERRSRGR---------------------------------------------CRGQNGVFPR-----RAVGNGVINTASSCQVAAAAPGAGDLKGVTGAGDRVAIFEKAPQGPGRASSGGGTA-RNVSVRKLSREIEELKLTCAELERSRLDTERQTLAYASGFI 159
            M+AAGLIY  TYGH LEN+R FYKFA+SV+ AS                                      R  RS++ L     RS G                                              CRG+ G         R VG+GV++ + S   A AA  + D  G +G                R SSGG    +  + R+++RE+EELKL CAE+ERS++ TERQ  A+A+G +
Sbjct:  413 MVAAGLIYHCTYGHSLENSRLFYKFANSVVSASGGSRVSLSRQTSGERIGAKGSRFGAKGVGSGGGLTDGNRPYRSTNDLTGIVSRSSGEHNYDHHRYFGGAGERGSNGEGGGSSDASSEDSGSVVSVDNSGSAVCRGEAGPSSAMEGEGRGVGSGVVSLSKSVVAATAAAASSD--GRSGF---------------RESSGGHAGEKKATTRRIARELEELKLACAEMERSQMRTERQMQAFATGLL 643
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8986.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTP0_ECTSI1.800e-929.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8986contigA-nodosum_M_contig8986:4791..10864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8986.1.1mRNA_A-nodosum_M_contig8986.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8986 177..10942 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8986.1.1 ID=prot_A-nodosum_M_contig8986.1.1|Name=mRNA_A-nodosum_M_contig8986.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=273bp
MIAAGLIYSNTYGHGLENTRHFYKFADSVLEASRERRSSSTLPSWERRSR
GRCRGQNGVFPRRAVGNGVINTASSCQVAAAAPGAGDLKGVTGAGDRVAI
FEKAPQGPGRASSGGGTARNVSVRKLSREIEELKLTCAELERSRLDTERQ
TLAYASGFIQDRAVALMATLSVRGTLQAKETLFLPLMRQSAAAAAAAAAT
DSLREMDDRHELDGRRLGEGAEGPTSHGVLILDGAQAGGGDDEYGYLQRR
GAEVYGKFPPGGTRLWTVVSNV*
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