prot_A-nodosum_M_contig896.19.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig896.19.1
Unique Nameprot_A-nodosum_M_contig896.19.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length375
Homology
BLAST of mRNA_A-nodosum_M_contig896.19.1 vs. uniprot
Match: A0A6H5KQA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA9_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 9.050e-32
Identity = 124/334 (37.13%), Postives = 158/334 (47.31%), Query Frame = 0
Query:  101 FSENDIADLNSDVSGLVGSLGDPDLELQGDAHILPGAASAAFRSRRG----------------------DALKLMKGTSGIKDSPDPS---------KARVECPSTKSETVSGSKGTKSILVLNGAACFIGGRLASTGEPQENVERSMAEAAAAYDMVLNTYTSNRACELLDRLCGGTFDGVIYNPAGF-----RAVYNIIDARHH----AREARRLDRDQT-SSPLESLF--AGQSRGPE-------------SDALSSLEYALVRTQCPVVRICT-RDVPLDGEVLPLT--WSDETRGCFG-RGIVRSGVIAGFTGSTSYKLAISAMADILQ 374
            F  +DIADLN D+SG VG LGDPD     D    P  A A   SRR                       D    ++G +G +D   P          K  +E    KS   SGS+  +S+LVLNG ACFI G LASTGEP+  V  SM +AA  +++ L   TSNR  ELLDRLC G +D V+YNP+GF     R V       H     A  A     +   + P E  F  + QSR  +             S + S+LEY L R  CPVV I   RD  L   +L  T    D   GC   RG    G+IAGF+G+ SY+LA++A++ +L 
Sbjct:   75 FWVHDIADLNKDISGFVGDLGDPDF----DTTPSPPPARAVSGSRRNAQAEREDTPAAFQESQTRLTLADHPGKVEGLAGERDEEIPMDDDWSTSFVKGYLEAVERKSS--SGSRARRSVLVLNGPACFIAGTLASTGEPRGAVASSMEDAAQEFNLSLTVCTSNREDELLDRLCEGGYDAVVYNPSGFSNQGLRVVVPTAAPTHQMMTDASPASNSSGNAAHTEPAEDGFPQSQQSRVDDPRHKTWHDNVPRHSGSGSALEYGLERAGCPVVIISPGRDGNLGANMLQSTSRGPDVDLGCRSERGA--EGIIAGFSGAVSYRLAMAAVSSVLD 400          
BLAST of mRNA_A-nodosum_M_contig896.19.1 vs. uniprot
Match: D7G4H9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H9_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 1.750e-30
Identity = 114/328 (34.76%), Postives = 154/328 (46.95%), Query Frame = 0
Query:  101 FSENDIADLNSDVSGLVGSLGDPDLEL-------------QGDAHILPGAASAAFRSRR-----GDALKLMKGTSGIKDSPDPSKARVECPSTKS-------ETVSGSKGTKSILVLNGAACFIGGRLASTGEPQENVERSMAEAAAAYDMVLNTYTSNRACELLDRLCGGTFDGVIYNPAGF----------------RAVYNIIDARHHAREARRLDR--DQTSSPLESLFAGQSRGPESDAL-------SSLEYALVRTQCPVVRICT-RDVPLDGEVLPLT--WSDETRGCFG-RGIVRSGVIAGFTGSTSYKLAISAMADILQ 374
             S +DIADLN D+SG VG LGDPD +              + DA      + AAF+  +      D     +G  G +D   P       P  K        +  SG +  + +LVLNG ACFI G LASTGEP+  V  SM +AA  +++ L   TSNR  ELLDRLC G +D V+YNP+GF                R + +   A +++  A   +   D    P +S      +    D +       S+LEY L R  CPVV I   RD  L   +LP T    D   GC   RG    G+IAGF+G+ SY+LA++A+  +L 
Sbjct:   77 ISVHDIADLNKDISGFVGDLGDPDFDTIPSPPPDRAASGSRRDAQAEREESPAAFQESQPRLTLADHPGKFEGLHGQRDEEIPMDDDWSTPLVKGYLETEERKNSSGLRARRPVLVLNGPACFIAGTLASTGEPRGVVASSMEDAAQEFNLSLTVCTSNREDELLDRLCEGGYDAVVYNPSGFSNQGLRAVVPTAAQIHRTMTDASPASNNSGTAVHTEPADDGFPQPQQSRVDNPRQKTWDDNVPRHSGSGSALEYGLERAGCPVVIISPGRDGNLGANMLPSTSRGPDVDLGCRSERGA--EGIIAGFSGAVSYRLAMAAVWSVLD 402          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig896.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQA9_9PHAE9.050e-3237.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4H9_ECTSI1.750e-3034.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 369..374
NoneNo IPR availablePIRSRPIRSR001399-3PIRSR001399-3coord: 188..267
e-value: 0.11
score: 9.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig896contigA-nodosum_M_contig896:252505..259274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig896.19.1mRNA_A-nodosum_M_contig896.19.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig896 251652..259291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig896.19.1 ID=prot_A-nodosum_M_contig896.19.1|Name=mRNA_A-nodosum_M_contig896.19.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=375bp
MRPAIAHCSQMCPHLRRSFRFPQFSLLLGRGLVTQTARSFNENNTRVKLP
RADGFTRRRYLRFTNSGNGNGNPEQRGFDDDTFKNISVTSELEGAAPPEV
FSENDIADLNSDVSGLVGSLGDPDLELQGDAHILPGAASAAFRSRRGDAL
KLMKGTSGIKDSPDPSKARVECPSTKSETVSGSKGTKSILVLNGAACFIG
GRLASTGEPQENVERSMAEAAAAYDMVLNTYTSNRACELLDRLCGGTFDG
VIYNPAGFRAVYNIIDARHHAREARRLDRDQTSSPLESLFAGQSRGPESD
ALSSLEYALVRTQCPVVRICTRDVPLDGEVLPLTWSDETRGCFGRGIVRS
GVIAGFTGSTSYKLAISAMADILQ*
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