prot_A-nodosum_M_contig895.42.17 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig895.42.17
Unique Nameprot_A-nodosum_M_contig895.42.17
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length446
Homology
BLAST of mRNA_A-nodosum_M_contig895.42.17 vs. uniprot
Match: D7FTP0_ECTSI (Similar to E1a binding protein P400 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP0_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 6.660e-92
Identity = 162/197 (82.23%), Postives = 178/197 (90.36%), Query Frame = 0
Query:    1 MLQRWVQVGKSDEEANVPVVPSPVTDAEFDDMVRSCVRNDAMEKVKAKRTAIVKRLQVLTGGKERPDVLGQALRDKNRHWDFLLKEMMWMADDFQQERKRHMSSRRKQAKSVVQHFLGHEARMAKKAKEEQLALRKGASKVAREVRGFWAKLNKVIAYKQRLDADESRKKAMDKHLVFLVKQTERYSSMVVEIPRGD 197
            M QRWVQVGK+D EANVPV PSPVTDA+FD+MVRSCVRNDAMEKVK KR A+ KRLQ +TGGKER DVLGQALR+KNRHWDFLLKEMMWMADDFQQERKRHMS+R+KQA+SV+ HF GHEAR AKKAKEEQLALR+GASKVAR+VR FW KLNKVIAYKQRL+ADE R+KAMDKHLVFLVKQTERYS +  + P GD
Sbjct:  147 MRQRWVQVGKTDAEANVPVTPSPVTDADFDEMVRSCVRNDAMEKVKTKRAALAKRLQAITGGKERQDVLGQALREKNRHWDFLLKEMMWMADDFQQERKRHMSARKKQARSVLLHFRGHEARKAKKAKEEQLALRRGASKVARDVRAFWGKLNKVIAYKQRLEADECRRKAMDKHLVFLVKQTERYSPL--DGPSGD 341          
BLAST of mRNA_A-nodosum_M_contig895.42.17 vs. uniprot
Match: A0A6H5KKD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD6_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 9.440e-84
Identity = 163/222 (73.42%), Postives = 177/222 (79.73%), Query Frame = 0
Query:    1 MLQRWVQVGKSDEEANVPVVPSPVTDAEFDDMVRSCVRNDAMEKVKAKRTAIVKRLQVLTGGKERPDVLGQALRDKNRHWDFLLKEMMWMADDFQQERKRHMSSRRKQAKSVVQHFLGHEARMAKKAKEEQLALRKGASKVAREVRGFWAKLNKVIAYKQRLDADESRKKAMDKHLVFLVKQTERYSSMVVEIPRGDEVDGGKEEXXXXXXXDEDSVSGDGS 222
            M QRWVQVGK+D EANVPV PSPVTDA+FD+MVRSCVRNDAMEKVK KR A+ KRLQ         DVLGQALR+KNRHWDFLLKEMMWMADDFQQERKRHM      A+SV+ +F GHEAR AKKAKEEQLALR+GASKVAR+VR FW KLNKVIAYKQRL+ADE R+KAMDKHLVFLVKQTERYSSMVVE PR   +    EE        E+S SG GS
Sbjct:  255 MRQRWVQVGKTDAEANVPVTPSPVTDADFDEMVRSCVRNDAMEKVKTKRAALAKRLQ---------DVLGQALREKNRHWDFLLKEMMWMADDFQQERKRHM------ARSVLLYFRGHEARKAKKAKEEQLALRRGASKVARDVRAFWGKLNKVIAYKQRLEADECRRKAMDKHLVFLVKQTERYSSMVVETPRLPRIGEDGEE--------EESSSGSGS 453          
BLAST of mRNA_A-nodosum_M_contig895.42.17 vs. uniprot
Match: A0A835ZKJ3_9STRA (SNF2 family N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKJ3_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.040e-29
Identity = 66/112 (58.93%), Postives = 91/112 (81.25%), Query Frame = 0
Query:   79 HWDFLLKEMMWMADDFQQERKRHMSSRRKQAKSVVQHFLGHEARMAKKAKEEQLALRKGASKVAREVRGFWAKLNKVIAYKQRLDADESRKKAMDKHLVFLVKQTERYSSMV 190
            HW+ LLKEM+WM++DF +E+ RH   +RK +KSV  +F   EAR A++ +E+  A R+ A++VAREVR FW KLN+V+AYKQ+L+ADE R++AMDKHLVFLVKQTERY++M+
Sbjct:    2 HWNSLLKEMLWMSEDFTKEKARHRGFQRKLSKSVQLYFNNAEAREARREREQLAAERRAAARVAREVRHFWGKLNRVVAYKQKLEADEMRRRAMDKHLVFLVKQTERYTAML 113          
BLAST of mRNA_A-nodosum_M_contig895.42.17 vs. uniprot
Match: A0A7R9UGU8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGU8_9STRA)

HSP 1 Score: 130 bits (328), Expect = 8.160e-29
Identity = 69/149 (46.31%), Postives = 103/149 (69.13%), Query Frame = 0
Query:   43 EKVKAKRTAIVKRLQVLTGGKERPDVLGQALRDKNRHWDFLLKEMMWMADDFQQERKRHMSSRRKQAKSVVQHFLGHEARMAKKAKEEQLALRKGASKVAREVRGFWAKLNKVIAYKQRLDADESRKKAMDKHLVFLVKQTERYSSMVV 191
            E ++A+R  + +R++ L GGK    V  +A R +  HWDFLLKEM+WM++DF QE+KRH    +K  K+V  +F   EAR A+  K+E   LR+ A+++ R V+ FW+K+NKV+ YKQ++  DE +K +MDKHL F+V+QTERY+  +V
Sbjct:   76 EAIEARRDEVKRRIETLNGGKRVRRVAIEAER-RETHWDFLLKEMLWMSEDFGQEKKRHQGRAKKLVKAVETYFRQAEARKARAQKDELARLRRRAAQLGRSVKLFWSKINKVVGYKQKIMLDEQKKSSMDKHLNFIVEQTERYTFQLV 223          
BLAST of mRNA_A-nodosum_M_contig895.42.17 vs. uniprot
Match: A0A4D9D5K6_9STRA (HSA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5K6_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.710e-28
Identity = 63/117 (53.85%), Postives = 89/117 (76.07%), Query Frame = 0
Query:   74 RDKNRHWDFLLKEMMWMADDFQQERKRHMSSRRKQAKSVVQHFLGHEARMAKKAKEEQLALRKGASKVAREVRGFWAKLNKVIAYKQRLDADESRKKAMDKHLVFLVKQTERYSSMV 190
            R  + HWD+LLKEM WM+ DFQQER  H+  R+K AK+VV +F    +R  ++A+EEQ   R+ A+++ REV+ FW K+N+V+A+KQ+L+ +E RK+AMDKHL FL+ QTERYS+MV
Sbjct:  219 RGPDVHWDYLLKEMQWMSADFQQERASHLRKRKKCAKAVVGYFKSMGSREERQAREEQEKRRRLAARIGREVKSFWRKVNQVVAFKQKLEVEEGRKRAMDKHLGFLLGQTERYSTMV 335          
BLAST of mRNA_A-nodosum_M_contig895.42.17 vs. uniprot
Match: W7TML5_9STRA (Chromatin remodeling complex subunit (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TML5_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.230e-28
Identity = 63/117 (53.85%), Postives = 89/117 (76.07%), Query Frame = 0
Query:   74 RDKNRHWDFLLKEMMWMADDFQQERKRHMSSRRKQAKSVVQHFLGHEARMAKKAKEEQLALRKGASKVAREVRGFWAKLNKVIAYKQRLDADESRKKAMDKHLVFLVKQTERYSSMV 190
            R  + HWD+LLKEM WM+ DFQQER  H+  R+K AK+VV +F    +R  ++A+EEQ   R+ A+++ REV+ FW K+N+V+A+KQ+L+ +E RK+AMDKHL FL+ QTERYS+MV
Sbjct:  246 RGPDVHWDYLLKEMQWMSADFQQERASHLRKRKKCAKAVVGYFKSMGSREERQAREEQEKRRRLAARIGREVKSFWRKVNQVVAFKQKLEVEEGRKRAMDKHLGFLLGQTERYSTMV 362          
BLAST of mRNA_A-nodosum_M_contig895.42.17 vs. uniprot
Match: A0A7S2UTV0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UTV0_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.110e-26
Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 0
Query:   79 HWDFLLKEMMWMADDFQQERKRHMSSRRKQAKSVVQHFLGHEARMAKKAKEEQLALRKGASKVAREVRGFWAKLNKVIAYKQRLDADESRKKAMDKHLVFLVKQTERYSSMVVEIPRGD 197
            HWD++ KEMMW+A DF  ERKR MS+ +K A +V Q+    E+R  +   E+ +  R+ ASK+AR++  +W K+++VIAYKQ++DAD  R+KAMD+HLVFLV+QTE+Y   + + P+ D
Sbjct:   18 HWDYVAKEMMWLAADFAAERKRQMSTAKKLAAAVRQYHKTKESRKLRDILEKDVKRRRVASKIARDLSKWWHKIDRVIAYKQKVDADTYRRKAMDRHLVFLVRQTEKYGERLAQQPQTD 136          
BLAST of mRNA_A-nodosum_M_contig895.42.17 vs. uniprot
Match: A0A7S4RJJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RJJ1_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.270e-25
Identity = 66/132 (50.00%), Postives = 93/132 (70.45%), Query Frame = 0
Query:   79 HWDFLLKEMMWMADDFQQERKRHMSSRRKQAKSVVQHFLGHEARMAKKAKEEQLALRKGASKVAREVRGFWAKLNKVIAYKQRLDADESRKKAMDKHLVFLVKQTERYS-SMVVEIPRG-----DEVDGGKE 204
            HWDF++KEMMW++ DFQ ERKR +S+ +K + +V Q     E R  ++  E +L  R+ A ++AR++RG+W K+ +VI+YKQRLDAD  R+KAMD+HLVFLVKQTERY  S+  ++  G     D  DGG+E
Sbjct:    1 HWDFVMKEMMWLSADFQSERKRQVSTAKKLSGAVRQFHKTKETRRLRELAEAELKRRRLAGRMARDIRGWWTKIERVISYKQRLDADAQRRKAMDRHLVFLVKQTERYGESLTTQMEDGGSVSDDHEDGGEE 132          
BLAST of mRNA_A-nodosum_M_contig895.42.17 vs. uniprot
Match: A0A662Y0X3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0X3_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.570e-23
Identity = 69/148 (46.62%), Postives = 98/148 (66.22%), Query Frame = 0
Query:   48 KRTAIVKRLQVLTGGKERP-------DVLGQALRDKNRHWDFLLKEMMWMADDFQQERKRHMSSRRKQAKSVVQHFLGHEARMAKKAKEEQLALRKGASKVAREVRGFWAKLNKVIAYKQRLDADESRKKAMDKHLVFLVKQTERYSS 188
            ++T +  +L+ LT GK  P       D  G+  R    H DFLL+EM WMA DF QERK  + S R  A+++V H    EAR+A++ K E++A R+ A++V R+V+ FW K++K+IAYK +L ADE R++AM +HL  LV+QTERYSS
Sbjct:   66 RKTQLEAQLEALTLGKPLPRDVERGCDASGR--RVTRTHRDFLLQEMEWMAADFAQERKWRVKSARTVAQALVSHLDRQEARLARQKKGEEVAKRRTAARVGRDVKKFWGKIDKIIAYKVKLQADELRQRAMQRHLAQLVEQTERYSS 211          
BLAST of mRNA_A-nodosum_M_contig895.42.17 vs. uniprot
Match: A0A662XZW8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZW8_9STRA)

HSP 1 Score: 113 bits (282), Expect = 6.680e-23
Identity = 66/146 (45.21%), Postives = 96/146 (65.75%), Query Frame = 0
Query:   48 KRTAIVKRLQVLTGGKERPDVLGQALRDKNR-----HWDFLLKEMMWMADDFQQERKRHMSSRRKQAKSVVQHFLGHEARMAKKAKEEQLALRKGASKVAREVRGFWAKLNKVIAYKQRLDADESRKKAMDKHLVFLVKQTERYSS 188
            ++T +  +L+ LT GK  P  + +      R     H DFLL+EM WMA DF QERK  + S R  A+++  H    EAR+A++ K E++A R+ A++V R+V+ FW K++K+IAYK +L ADE R++AM +HL  LV+QTERYSS
Sbjct:   66 RKTQLEAQLEALTLGKPLPRDMERGCDASGRRVTRAHRDFLLQEMEWMAADFSQERKWRVKSARTVAQALASHLDRQEARLARQKKGEEVAKRRTAARVGRDVKKFWGKIDKIIAYKVKLQADELRQRAMQRHLAQLVEQTERYSS 211          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig895.42.17 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTP0_ECTSI6.660e-9282.23Similar to E1a binding protein P400 (Partial) (Fra... [more]
A0A6H5KKD6_9PHAE9.440e-8473.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZKJ3_9STRA1.040e-2958.93SNF2 family N-terminal domain-containing protein (... [more]
A0A7R9UGU8_9STRA8.160e-2946.31Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9D5K6_9STRA1.710e-2853.85HSA domain-containing protein n=1 Tax=Nannochlorop... [more]
W7TML5_9STRA2.230e-2853.85Chromatin remodeling complex subunit (Fragment) n=... [more]
A0A7S2UTV0_9STRA2.110e-2648.74Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S4RJJ1_9STRA1.270e-2550.00Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A662Y0X3_9STRA2.570e-2346.62Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A662XZW8_9STRA6.680e-2345.21Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014012Helicase/SANT-associated domainSMARTSM00573bromneu2coord: 71..139
e-value: 3.6E-7
score: 39.8
IPR014012Helicase/SANT-associated domainPFAMPF07529HSAcoord: 75..136
e-value: 2.5E-9
score: 37.3
IPR014012Helicase/SANT-associated domainPROSITEPS51204HSAcoord: 67..139
score: 13.306297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..446
NoneNo IPR availablePANTHERPTHR45685HELICASE SRCAP-RELATEDcoord: 59..331
NoneNo IPR availablePANTHERPTHR45685:SF1HELICASE SRCAPcoord: 59..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig895contigA-nodosum_M_contig895:199453..205373 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig895.42.17mRNA_A-nodosum_M_contig895.42.17Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig895 199453..205404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig895.42.17 ID=prot_A-nodosum_M_contig895.42.17|Name=mRNA_A-nodosum_M_contig895.42.17|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=446bp
MLQRWVQVGKSDEEANVPVVPSPVTDAEFDDMVRSCVRNDAMEKVKAKRT
AIVKRLQVLTGGKERPDVLGQALRDKNRHWDFLLKEMMWMADDFQQERKR
HMSSRRKQAKSVVQHFLGHEARMAKKAKEEQLALRKGASKVAREVRGFWA
KLNKVIAYKQRLDADESRKKAMDKHLVFLVKQTERYSSMVVEIPRGDEVD
GGKEEEEEDSSSDEDSVSGDGSALEGGIGQGGLGDAPEPSGPSPEDDDDE
EDDDEDKARSDDSDASMEDGQDDVNMAIKEDTGEQEATHDGNRKGDTDGD
TREAPRIAEQQRALDEDVRAPVKTDTNTNTEDIDQSYEAAATAAGRPGAR
RDSGSSEGRPNHAGGDDGNKPKASVLSTSEGERAPHDTAGAAGGSPRGRS
RSRRRPRISVGSESGGGAIAEAGKRSGWDAWISGERGGRGGPSSDR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014012HSA_dom