prot_A-nodosum_M_contig895.34.5 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig895.34.5
Unique Nameprot_A-nodosum_M_contig895.34.5
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length920
Homology
BLAST of mRNA_A-nodosum_M_contig895.34.5 vs. uniprot
Match: D7FTP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP2_ECTSI)

HSP 1 Score: 408 bits (1049), Expect = 8.010e-130
Identity = 228/439 (51.94%), Postives = 300/439 (68.34%), Query Frame = 0
Query:   58 VTALRQRRRYIITQLYNVRQSIQATEDEVLSAQDLPELTTKVLAPKDTVDESNCESFVCAVDWNTGRDDGPGPKPLTDRLAAERARALLRKFDNDGDGCLSFEEFRAYLMWFKRDTGEVGERLATNREFWNAFVVDQAGPTAE----GVTSSDGSLTETGFIAHRRMIEHEHPLELDLLSLGLNVLPEYLQNWQRAKDAFDRIYFESVLASEQHDGRTAKGNHIDSYVECEGLVETEQAQLLLADAGEIMTKLRLEEEMSQAKWRARMLHQLFEIKQKRNRLAQAQAFSSHAKVHDAERIHRHTWLAWYMSGRAKQE-DASWIEKILVRVKTAMYRSLRSLSKLIELSKGVLESFTQRGLISSA---------------------LHAPLKDSESRVAFRIAVGDAEDTGQGFSLALKFFHKINNASTDYPVEPLRPGV 470
            + ALR+RR YII QL+NV QSI+ TE EVL+ + +PE++ + LAP+DTVDES   SF+ AV+W+ G DDGPGPKPLTDR A +RARALLR FD DGDGCLSF+EFRAYL+   RD G++GERL TNREFW ++V DQAGP A     G  S DG LT++GF+ HRRM+E +HPLE+DLL++GL++LPE LQ W R K+AFDRI  E V A+ +   R AK     S  + +G V+  +AQLLLADAGE+M+KLR+EEE++ A   A+++ ++ E ++KRNRLA  QA S  A V+DA+RI+R  WL+W+MSGRAK+E + SW+EK L+R+KT +YR  R+   L+   + VLE   Q+GLIS                       L AP K S++R   R A+GDAED G GFS++L F HK N    + P   L  G+
Sbjct:   48 IAALRRRRAYIIAQLHNVGQSIRETEAEVLAGKCVPEISKRDLAPQDTVDESKTGSFLHAVNWSAGTDDGPGPKPLTDR-AMDRARALLRLFDADGDGCLSFDEFRAYLVRLGRDKGKLGERLTTNREFWLSYVADQAGPPAAADVGGAVSFDGCLTQSGFVGHRRMVEADHPLEVDLLTMGLDLLPESLQRWLRVKNAFDRIDAEGVSAATERGERGAK-----SRGDYDGSVDRGEAQLLLADAGEVMSKLRVEEELTLATMHAKLMLEVVEERRKRNRLAHTQALSRSA-VNDAQRIYRTAWLSWFMSGRAKEERETSWLEKNLIRLKTRLYRGFRACYSLVGRPRRVLEELVQQGLISCTSLILNPTGRFDDVTLYGVAANLLAPFKGSDARATLRAAIGDAEDDGSGFSVSLNFLHKGNGVWEERPGGELGGGL 479          
BLAST of mRNA_A-nodosum_M_contig895.34.5 vs. uniprot
Match: D7FTP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP1_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 4.410e-52
Identity = 138/345 (40.00%), Postives = 170/345 (49.28%), Query Frame = 0
Query:  575 QILESKRTVLNDRFKVSLTGEACFCESLISKLLEEVIASVMGDIIQASADSTEHDSERFVRRIRTEDAVPGIEHPL---SENPACSVHELRADGTLFYGNQQRQSSKTTLSLATGGTSAQL----TPPRLGLFMSSSMMMPHQDTKAMRWLDWMWSFAAKLRGTRELTFDLEAATPLEFLESSWARAYLPASWRSEEMFTTPGYVAEWFTSWKACLLSHASRLRKSAREHIEQKLQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAQHNKEVLALAEDSARRLKEAKDIQMEEYAELDEAFRACLGCLIGIRELRIQSGPNVLVVEAQGLDILDALSSTTDYDG 912
            +ILES+  VL+DR KVS++ E CFC  L+SKLLEE +AS++ ++ QA ADS EHD  R  R  RT+   PG+ HPL       A SV E R  G    G+      K+  S   GGTSA++    TP R  L          QDTK  +WLD MW+FAAKLRG +    DLEA++PLEFLESSWARA                                    +    E + +K                                           E++ RRL+EAKD QMEEYAEL++A  AC   L+G RELRIQSG NVLV E QGLDILDALS+     G
Sbjct:    4 EILESRTLVLDDRLKVSISAEGCFCGPLVSKLLEETLASMIDNVRQAVADSAEHDVGRVEREARTQKNAPGMRHPLVVPKRRVAGSVREGRGAGLPGGGSGGVGQKKSESS---GGTSAEMAAIITPTRGRLLTERGKRF--QDTKTSKWLDRMWAFAAKLRGAKAFALDLEASSPLEFLESSWARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSKALLAEAMGEK------------------------------------------EEETVRRLREAKDKQMEEYAELEDALLACTKYLLGPRELRIQSGHNVLVAEFQGLDILDALSAARHPGG 301          
BLAST of mRNA_A-nodosum_M_contig895.34.5 vs. uniprot
Match: A0A7S2SK77_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SK77_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.020e-26
Identity = 128/564 (22.70%), Postives = 225/564 (39.89%), Query Frame = 0
Query:  376 EKILVRVKTAMYRSLRSLSKLIELSKGVLESFTQRGLISSALHAPLKDSESRVAFRIAVGDAEDT-GQGFSLALKFFHKINNASTDYPVEPLRPGVGMVVTLDLEAKDEMPEGALNKTAEALEKVTRSHLLGELKRSNIFHSMRASVLTLP-DRSKIIRVTLCWRAQANIDFVFRQMKLGLRPTDLVRELNVTFFCPLELYQILESKRTVLNDRFKVSLTGEACFCESLISKLLEEVIASVMGDIIQASADSTEHDSERFVRRIRTEDAV----PGIEHPLSENPACSVHELRADGTLFYGNQQRQSSKTTLSLATGGTSAQLTPPRLGLFMSSSMMMPHQDTKAMRWLDWMWSFAAKLRGTRELTFDLEAATPLE-FLESSWARAYLPASWRSEEMFTTPG-----------YVAEWFTSWKACLLSHASRLRKSAREHIEQKLQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAQ-----HNKEVLALAEDSARRLKEAKDIQMEEYAELDEAFRACLGCLIGIRELRIQSGPNVLVVEAQGLDILDALSSTTDYDGLDAA 916
            E   ++ K+ + R+ R     ++   G L S ++RGLI  +L A LK    R      +G  E     GFS+ L    K+ N++  +    +  G+G    +D   + E+P+ A+ + A ALE V   H   EL+R   F   R    T   D   ++RV   W+ +++IDFV R++ +G++ +D++ +L +T    L L  ILE ++T++++   V  TG       L++KLLEE++ S       A  +  E   +      RT+  V     G+   L +    S+  L+   T     +Q  + +                            +  Q  + +RWL          + T+  T D    +  E  L++ W++ +        E FTTPG           Y++       ACL  H +R ++  RE    +L+                               +        +   ++     RL   K  + EE  +L   +  C   L+ +  +++QSG N L +  QGLD+ + L    ++  +DAA
Sbjct:   34 EAAAIQFKSIIRRAYRMGLHGLKSVMGTLNSVSERGLIVDSLVARLKQEVGRYGMEFRLGADEGVLDAGFSMTLSL-RKLANSTAGFAELGMPGGLGTAFLVDFLIRSEVPDKAVTRAASALEAVLNEHCKYELERIPSFKLFRVFKHTHEADHVPVLRVAFAWKPESSIDFVLRRLNIGVKFSDILLDLTMTLQSSLGLTDILEGRKTIIDESLNVQATGNLVCARRLVAKLLEEIVRSPFEANAAAEIELAEQRRDYAAAFQRTKQVVLEKFKGVSQALKDIKEVSITGLQEPPTSQTSAEQEHTKQR------------------------GNWVQRQTWRMLRWL----------QSTKSCTLDFSYTSASEAVLKNPWSQGWFADL--GLEDFTTPGAIYHRWIAFQQYLSSQIQESLACLRKHKTRRKRWDREEEAARLKESASMTQRQRREKELAEEKKRMAARLLSMGLEVTADLEEDDTSGISPVELMRLLVTKQFKTEE--KLQGLYGDCWAALVAVHGIQVQSGENRLTLSFQGLDLFELLPEP-EHRTVDAA 557          
BLAST of mRNA_A-nodosum_M_contig895.34.5 vs. uniprot
Match: A0A6U1BVW4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1BVW4_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.240e-13
Identity = 54/171 (31.58%), Postives = 86/171 (50.29%), Query Frame = 0
Query:  139 AERARALLRKFDNDGDGCLSFEEFRAYLMWFKRDTGEVGERLATNREFWNAFVVDQAGPTAEGVTSSDGSLTETGFIAHRRMIEHEHPLELDLLSLGLNVLPEYLQNWQRAKDAFDRIYFESVLASEQHDGRTAKGNHIDSYVECEGLVETEQAQLLLADAGEIMTKLRLE 309
            A++   L  +F +   G +++ +FR YL   +R   E    +  + E W +++ D  G      T   G LT   F+A+R  IE ++PLE DLLS+GL +LP+ L  W++ + AFDR+  E +   E+     A   +I ++  CE        QL   D GEIM+ +  E
Sbjct:   80 ADKVHELYERFCSV-PGRMTYFDFRGYLHALRR-LDEFDPHIIDSEEAWRSYMTDMFG------TDEAGGLTPGQFLAYREWIESQYPLEADLLSIGLPLLPDTLIAWKQCEAAFDRLADEGITEEEKFMLLRAGEEYISNFPRCE-------FQLFAYDNGEIMSDMECE 235          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig895.34.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FTP2_ECTSI8.010e-13051.94EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7FTP1_ECTSI4.410e-5240.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SK77_9STRA3.020e-2622.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U1BVW4_9STRA1.240e-1331.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 841..868
NoneNo IPR availableCOILSCoilCoilcoord: 814..837
NoneNo IPR availableGENE3D1.10.238.10coord: 77..179
e-value: 6.6E-6
score: 28.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 807..831
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 795..839
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 150..162
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 137..172
score: 13.788124
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 135..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig895contigA-nodosum_M_contig895:79404..165578 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig895.34.5mRNA_A-nodosum_M_contig895.34.5Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig895 79404..165578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig895.34.5 ID=prot_A-nodosum_M_contig895.34.5|Name=mRNA_A-nodosum_M_contig895.34.5|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=920bp
KSPLRTKNQQEDTLTRTAVTTKTATWVDFDPGESGVGDDIDGCDEQVVTS
DLEDHDEVTALRQRRRYIITQLYNVRQSIQATEDEVLSAQDLPELTTKVL
APKDTVDESNCESFVCAVDWNTGRDDGPGPKPLTDRLAAERARALLRKFD
NDGDGCLSFEEFRAYLMWFKRDTGEVGERLATNREFWNAFVVDQAGPTAE
GVTSSDGSLTETGFIAHRRMIEHEHPLELDLLSLGLNVLPEYLQNWQRAK
DAFDRIYFESVLASEQHDGRTAKGNHIDSYVECEGLVETEQAQLLLADAG
EIMTKLRLEEEMSQAKWRARMLHQLFEIKQKRNRLAQAQAFSSHAKVHDA
ERIHRHTWLAWYMSGRAKQEDASWIEKILVRVKTAMYRSLRSLSKLIELS
KGVLESFTQRGLISSALHAPLKDSESRVAFRIAVGDAEDTGQGFSLALKF
FHKINNASTDYPVEPLRPGVGMVVTLDLEAKDEMPEGALNKTAEALEKVT
RSHLLGELKRSNIFHSMRASVLTLPDRSKIIRVTLCWRAQANIDFVFRQM
KLGLRPTDLVRELNVTFFCPLELYQILESKRTVLNDRFKVSLTGEACFCE
SLISKLLEEVIASVMGDIIQASADSTEHDSERFVRRIRTEDAVPGIEHPL
SENPACSVHELRADGTLFYGNQQRQSSKTTLSLATGGTSAQLTPPRLGLF
MSSSMMMPHQDTKAMRWLDWMWSFAAKLRGTRELTFDLEAATPLEFLESS
WARAYLPASWRSEEMFTTPGYVAEWFTSWKACLLSHASRLRKSAREHIEQ
KLQRQQHQQHQQHQQHQQHQRQQLQQRQQQAEDAQHNKEVLALAEDSARR
LKEAKDIQMEEYAELDEAFRACLGCLIGIRELRIQSGPNVLVVEAQGLDI
LDALSSTTDYDGLDAAFRP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair