prot_A-nodosum_M_contig893.15.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig893.15.1
Unique Nameprot_A-nodosum_M_contig893.15.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length404
Homology
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BLAST of mRNA_A-nodosum_M_contig893.15.1 vs. uniprot
Match: D8LRY9_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY9_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 7.100e-32
Identity = 119/347 (34.29%), Postives = 153/347 (44.09%), Query Frame = 0 
Query:    2 VRESMFTRVTDTWEIMADEVPLIAE-----------IGRNFSEVVAGRLEATCLAVEAEMRVADEVAATRGETALVEPD---WRGSNILRGDVLTRLETFRIYNTREAPAGEPGFSPAEFRQ----DLVQRLRATREAVVDRMNSIHKTVATAAGVHGLQFWPAISEDEA---LMGIDYVAQCVLEKLKAAYLAAEGVRDPTGRVPVGNIRERLLEKKHETQAAAAKELPKGHVHRKNSSRVDGVTSADNSAEMAASTR-------------RPPRGASANTKRRRSGSGVRRCKNKECSLHPHFGFTRPEYCSHHKLPGMFNVKGRRCIDPECTRTPVYGKNGDPH 314
            +RE +  R+ D W  +  E+   A+             ++F+EV+  RL+ATC AVEAE++ A    A   +TA   P    WRGS  LRGDVL+RLE +R  N  E   G PG     F      D  +R  A            H+      G         ++ED A     G++   +     +K+  L   G  +P  R                  AAA       H  R                 +A + R                       KR+RSG+G RRCK++ C LHPHFG TRPEYCS HKLPGMFNVKGRRCI PECTRTPVYG++GDPH
Sbjct:  351 LREILLARLFDLWSTVEAEMVSYADGTAAASGGGGAPRKSFNEVLVERLQATCQAVEAELKAAK---ARGDDTAFCNPPQHHWRGSGALRGDVLSRLEAYRREN--EGNCGMPGSGHGRFSSLNCIDDFERANALARGGXXXXXR-HRXXHAGGG---------LAEDGAGDLRQGLETAIEVTRGAVKSELLMF-GDDEPAQR-----------------NAAA-------HPARSXXXXXXXXXXXXXXXXVAPTARGGGPXXXXXXXXXXXXXXXXXXKKRKRSGNG-RRCKHEGCLLHPHFGLTRPEYCSKHKLPGMFNVKGRRCIHPECTRTPVYGRSGDPH 656
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig893.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRY9_ECTSI7.100e-3234.29EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY9... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 334..368
e-value: 6.1E-9
score: 36.3
coord: 296..330
e-value: 3.9E-6
score: 27.3
coord: 261..292
e-value: 1.4E-4
score: 22.4
NoneNo IPR availableGENE3D6.10.140.110coord: 312..374
e-value: 2.3E-6
score: 29.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..403

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig893contigA-nodosum_M_contig893:283184..285350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig893.15.1mRNA_A-nodosum_M_contig893.15.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig893 282729..285831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig893.15.1 ID=prot_A-nodosum_M_contig893.15.1|Name=mRNA_A-nodosum_M_contig893.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=404bp
MVRESMFTRVTDTWEIMADEVPLIAEIGRNFSEVVAGRLEATCLAVEAEM
RVADEVAATRGETALVEPDWRGSNILRGDVLTRLETFRIYNTREAPAGEP
GFSPAEFRQDLVQRLRATREAVVDRMNSIHKTVATAAGVHGLQFWPAISE
DEALMGIDYVAQCVLEKLKAAYLAAEGVRDPTGRVPVGNIRERLLEKKHE
TQAAAAKELPKGHVHRKNSSRVDGVTSADNSAEMAASTRRPPRGASANTK
RRRSGSGVRRCKNKECSLHPHFGFTRPEYCSHHKLPGMFNVKGRRCIDPE
CTRTPVYGKNGDPHPTYCAAHKLHNMIDIKNPTCREQSCNRQPSFGSPQD
RRATYCASHMLEGMVNVRRILAAKGSSRRSRRERSSAADAEAYIAKPSAS
RRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys