prot_A-nodosum_M_contig892.7.8 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig892.7.8
Unique Nameprot_A-nodosum_M_contig892.7.8
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1181
Homology
BLAST of mRNA_A-nodosum_M_contig892.7.8 vs. uniprot
Match: A0A6H5KZY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY8_9PHAE)

HSP 1 Score: 681 bits (1757), Expect = 2.160e-221
Identity = 526/1259 (41.78%), Postives = 665/1259 (52.82%), Query Frame = 0
Query:    1 MGNSSGKSA-EALREAVHVLLEAPLSSGAAAGSSGVPRGDAVGRQESGXXXXXXXXXXXXXXXRD-----------VFGGGVTDDKAFFEAFSVSVATDMCTLQPSNLKMLARKALSNISRFMEARDPGPPKETLLASVRVLTRAFPAMLSEPALRKWCWERRSLLYLLGHLDEDXXXXXXXXXXXXE----------------PSGDGAALQTRTAGGNNSAGDKGVPVPVEAGGEGESGADAAAAKPEENAPGDVQGQAKEDEXXXXXXXVRGGQEVGDEDGEGAGG---------------------DFKVCFASVVLHMITSLLSFPGFAIGEEALDWDDYYTPIPDPHYGIRKACVIWAPGVAVTDQNMRQVNFLDSNRIEALRLLTVVMSLPLFLDTPPMRDWRRLDTDTMTKQSAGGDRKH---------IPGVPLRNPLTALATSRHMPHATELFYSLLNLAVVGGSTYRG---GAPALGTGTGLLERVGLLGLVGGG--GSXXXXXXXXXXGPQSLVECSLQVLALLLRHGRPYGELLEKRGVSLAATGAQSAYGSIPRKAQMEIEADPGYNCYRRCVFMIHSDEELDAIALGLLRLLNDARLGKHRRGEGAPDGSVLSCHPEALMILSAFVHDNARFVPRLAGSDELARGTVVCLCHFLESVVGTMVKDYDSGDHNDRDDTVPHEPPPPYNDEEPGGVGERITLGTRGGKHPLAEDVGLLVLVSRLLLILSESEHFMAMLVDTPVAGRRG----EFSSPEMEPGASEGAVTLIEALLAVTSWSMSRAPEGVSLAAPALAAVARNACPFLTAGMRRNTADWLLDALEIHLSAQASRS--IDDVGEAGRSPS-----LAVASLLLEGLAAAAAFHHSEQDELVEALTKRYTE--------------AARVRTPPPTPAAGTHGQEQEEGGVLRWLASRGGMLEEGH-------GAVGSEVGKEGEEQGRGFSP--FADEMWFRVSKGDLPWEGWAMRQVLWPLVSRLVGP----TANGSPSECHE-------AASALMASARKDVLRPVGLCPPWSEEEGERIEDHGSERKSDAGAAGGGRASSRSTAAVSDPSLVESGRQMPKDHSDAAAAANATASRAVLGLPSESEGVAGEG----GVEDEQVEVQ-----------------------GIGG-GMVVGVGPAGFTGGLARPARVLIVEEPWQSIYLWSVVFVRTAWDVRLFDTRTVRLFEVVDDEEXXXXXEEGDSD 1123
            MGNS+GKS+ E+LREAV +LLE P+   AA                  XXXXXXXXXXXXXXX             VFG  + + + FFE FS S AT M   QP NLK+LAR+ALSNI RF+E+R   P   T+ AS+RVLTR  PA+LS P LR WCW RR+L  LL  L+ +                             P G                     P P E         D   A    +  G   G      X        G  E  D+DGEG GG                     +F VCFASV LH +TSLLSFPGF + +EA++WDDYYTPIP+ HYGI++A +IWAPGVAVT+ NMRQV+  DSNR+E LRLL  ++SLPLFLDTP  R      T T+  Q+    R+          IPG PL NP  ALA SRH+  ++ELFYSLLNLAVV  +   G   G  + G G G++    L    GGG  G           G QSL E +LQ+LALLLRHGRPY ELL++RGV LAA+GA   YGS+PR  +   E   GYNC+RRCVF++HSD++L AIALGLLR ++DARL + R     P GS+LS H E+LM+ +AFVH+N RFVPRLA S+EL RGT VC+CHFL   V   ++  +   H D D            D E     E    G    + P  E++GLLVL+SRLLL LS++  F+AMLVD   AG  G    EF++P++  G + G  T+IE +L++  ++++RA  G ++ APALAAVARN CPFLT GMRR TA+ LLDALE++L    S    +++ GE G + +      +VASLLLEGLAAAA FHH EQ ELV+A+  R  +                          AG   +    GGVLRWLA+ GGMLE G        G VG  VG    E     +    +++ WF      LPWEGWAMR+VLWPL+S +  P    TA G+P            A  AL +SAR+ VLRP GLCPPW +E+G   ED  +    D    G G  + R  AAV D +       +     D AAAA     R+    P  S G A  G    G +  ++                          G+GG G+  G    G  G +    RV  VEEPWQSIYLWS++F +T  D+RLFD+R VRLFE++++E        G+ D
Sbjct:    1 MGNSAGKSSDESLREAVQMLLEVPMVGPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVWMGVFGCAIEEGE-FFEVFSASDATAMRLRQPGNLKLLAREALSNICRFVESRQTSPHMVTVYASIRVLTRVLPALLSTPELRSWCWARRTLPQLLSFLENNEEQSPRRNGQDVRQXXXXXXXXGRRQEQTPRGRFPTPXXXXXXXXXXXXMTSPPSPAEL--------DDGVAS---SGSGVSTGXXXXXXXSVNCRPYGGSGE--DDDGEGDGGKGXXXXXXXXXXXXXRGGAGDEFPVCFASVALHAVTSLLSFPGFCVDDEAMEWDDYYTPIPELHYGIKEAAIIWAPGVAVTEHNMRQVSSFDSNRVETLRLLATLLSLPLFLDTPSPR------TPTIPPQAPPLRRRRWPSRAPPPSIPGKPLPNPTAALAASRHLQFSSELFYSLLNLAVVSRAAPGGRAAGRASGGGGQGVMRWFAL----GGGRTGGAAGTRAEAEGGAQSLAEWALQMLALLLRHGRPYDELLKQRGVDLAASGAAPVYGSVPRPVEFSAERARGYNCFRRCVFVVHSDDDLGAIALGLLRHVDDARLRRTR-----PQGSLLSIHQESLMVFAAFVHENPRFVPRLAASEELVRGTAVCVCHFLRGAVAATIEAAEQ-QHLDADADA---------DGEAADAMEGGNRGIDNRRKPHGEEIGLLVLLSRLLLTLSDNVRFVAMLVDMLAAGGAGGRGAEFAAPDL--GDAPG-TTMIEVVLSLCVYALARAGTGGAVVAPALAAVARNLCPFLTRGMRRQTAELLLDALEVYLVGGGSDGGLVEEEGEGGGATAPNPCYWSVASLLLEGLAAAAVFHHEEQAELVKAMIGRSRDNPTFLGKQXXXXXXXXXXXXXXXXXXAGQETRPWAGGGVLRWLAAHGGMLEGGTEVGDGDGGVVGDVVGSWSREASAKEAERLASEQFWFESRVPSLPWEGWAMRRVLWPLLSLVTAPPPSTTAPGTPGPAGSREQDRAAAVRALASSARRKVLRPAGLCPPWGDEDG-GDEDPRARGPED----GNGGYAQRGAAAVGDAAGY-----LTSTPPDTAAAAXXAPGRS---SPGASRGTAVSGVSLVGEDGRRLPXXXXXXXXXXXXXXXXXXXXXXXXAGVGGEGVFPGREKEGGGGEVEVLTRVAAVEEPWQSIYLWSLLFTKTTADLRLFDSREVRLFEIIEEEAGDYGERHGNGD 1204          
BLAST of mRNA_A-nodosum_M_contig892.7.8 vs. uniprot
Match: D8LIC0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC0_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 5.830e-57
Identity = 139/311 (44.69%), Postives = 181/311 (58.20%), Query Frame = 0
Query:  469 VLALLLRHGRPYGELLEKRGVSLAATGAQSAYGSIPRKAQMEIEADPGYNCYRRCVFMIHSDEELDAIALGLLRLLNDARLGKHRRGEGAPDGSV--LSCHPEALMILSAFVHDNARFVPRLAGSDELARGTVVCLCHFLESVVGTMVKDYDSGDHNDRDDTVPHEPPPPYNDEEPGGVGERITLGTRGGKHPLAEDVGLLVLVSRLLLILSESEHFMAMLVDTPVAG-----RRGEFSSPEMEPGASEGAVTLIEALLAVTSWSMSRAPEGVSLAAPALAAVARNACPFLTAGMRRNTADWLLDALEIHL 772
            +LALLLRHGRPY ELL++RGV LAA+GA   +GS+PR  +   E   GYNC+RRCVF++HSD++L AIALGLLR ++D+RL + R     P GS+  LS H E LMI +AFVH+N RFVPRLA S+E                                                                      VGLLVL+SRLLL LS++E F+AMLVD   AG     R  EF++P++  G + G  T+IE +L++  ++++RA  G ++ APALAAVARN CPFLT GMRR TA+ LLDALE++L
Sbjct:    1 MLALLLRHGRPYDELLKQRGVDLAASGAAPVFGSVPRPVEFSAERARGYNCFRRCVFVVHSDDDLGAIALGLLRHMDDSRLRRTR-----PQGSLSLLSIHQETLMIFAAFVHENPRFVPRLAASEE----------------------------------------------------------------------VGLLVLLSRLLLTLSDNERFVAMLVDMLAAGGGAGGRGAEFAAPDL--GDAPG-TTMIEVVLSLCVYALARAGTGGAVVAPALAAVARNLCPFLTRGMRRQTAESLLDALEVYL 233          
BLAST of mRNA_A-nodosum_M_contig892.7.8 vs. uniprot
Match: D8LIB9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB9_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 6.400e-57
Identity = 166/409 (40.59%), Postives = 200/409 (48.90%), Query Frame = 0
Query:   78 EAFSVSVATDMCTLQPSNLKMLARKALSNISRFMEARDPGPPKETLLASVRVLTRAFPAMLSEPALRKWCWERRSLLYLLGHLDEDXXXXXXXXXXXXEPSGDGAALQTRTAGGNNSAGDKG---VPVPVEAGGEGESGADAAAAKPEENAPGDVQGQAKEDEXXXXXXXV-----RGGQEV----GDEDGEG-------------------------AGGDFKVCFASVVLHMITSLLSFPGFAIGEEALDWDDYYTPIPDPHYGIRKACVIWAPGVAVTDQNMRQVNFLDSNRIEALRLLTVVMSLPLFLDTPPMRDWRRLDTDTMTKQSAGGDRKHIPGVPLRNPLTALATSRHMPHATELFYSLLNLAVVGGSTYRG---GAPALGTGTGLLERVGLLGLVGGGG 446
            E FS S AT M   QP NLK+LAR+ALSNISRFME+R   P   T+ AS+RVLTR  PA+LS P LR WCW RR+L  LL +L  +              +G     Q +  G       +G    P P++A  E     D  +          V        XXXXXXX      RGG       G  DG+                          AG DF VCFASV LH  TSLLSFPGF + +EA++W+DYYTPIPD HYGI++A +IWAPGVAVT+ NMRQV+  DSNR+E LRLL  ++SLPLFLDTP                                           P ++ELFYSLLNLAVV  +   G   G    G G G++   G  G  G GG
Sbjct:   27 EVFSASDATAMRLRQPGNLKLLAREALSNISRFMESRQTSPHMVTVNASIRVLTRVLPALLSSPELRSWCWARRTLPQLLSYLRNNEEHSPPR-------NGQDVRQQQQQQGRRXEQTPRGRFPTPEPIDA--EXXXXXDTTSPPSPTELDDGVASSGXXXXXXXXXXXXXXXXXRGGVNCRPYGGSGDGDDXXXXXXXXXXXXXXXXXXXXXXXXXAGDDFPVCFASVALHAATSLLSFPGFCVDDEAMEWNDYYTPIPDLHYGIKEAAIIWAPGVAVTEHNMRQVSSFDSNRVETLRLLATLLSLPLFLDTPS------------------------------------------PFSSELFYSLLNLAVVNKAVPGGEAAGRAGGGGGQGVMRWFGPWGGPGPGG 384          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig892.7.8 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KZY8_9PHAE2.160e-22141.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIC0_ECTSI5.830e-5744.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LIB9_ECTSI6.400e-5740.59Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF09742Dymeclincoord: 91..607
e-value: 2.4E-16
score: 59.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1141..1157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 952..1014
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..634
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1020..1039
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1112..1180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 957..972
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..654
IPR026705Hid-1/Ecm30PANTHERPTHR21575PROTEIN HID1coord: 77..689

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig892contigA-nodosum_M_contig892:96721..127801 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig892.7.8mRNA_A-nodosum_M_contig892.7.8Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig892 96162..136832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig892.7.8 ID=prot_A-nodosum_M_contig892.7.8|Name=mRNA_A-nodosum_M_contig892.7.8|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1181bp
MGNSSGKSAEALREAVHVLLEAPLSSGAAAGSSGVPRGDAVGRQESGGGD
EEDEPDEEELLLRDVFGGGVTDDKAFFEAFSVSVATDMCTLQPSNLKMLA
RKALSNISRFMEARDPGPPKETLLASVRVLTRAFPAMLSEPALRKWCWER
RSLLYLLGHLDEDEEEQRRQQRTAEEPSGDGAALQTRTAGGNNSAGDKGV
PVPVEAGGEGESGADAAAAKPEENAPGDVQGQAKEDEKEGGGGGVRGGQE
VGDEDGEGAGGDFKVCFASVVLHMITSLLSFPGFAIGEEALDWDDYYTPI
PDPHYGIRKACVIWAPGVAVTDQNMRQVNFLDSNRIEALRLLTVVMSLPL
FLDTPPMRDWRRLDTDTMTKQSAGGDRKHIPGVPLRNPLTALATSRHMPH
ATELFYSLLNLAVVGGSTYRGGAPALGTGTGLLERVGLLGLVGGGGSGGG
SGGGRDGGPQSLVECSLQVLALLLRHGRPYGELLEKRGVSLAATGAQSAY
GSIPRKAQMEIEADPGYNCYRRCVFMIHSDEELDAIALGLLRLLNDARLG
KHRRGEGAPDGSVLSCHPEALMILSAFVHDNARFVPRLAGSDELARGTVV
CLCHFLESVVGTMVKDYDSGDHNDRDDTVPHEPPPPYNDEEPGGVGERIT
LGTRGGKHPLAEDVGLLVLVSRLLLILSESEHFMAMLVDTPVAGRRGEFS
SPEMEPGASEGAVTLIEALLAVTSWSMSRAPEGVSLAAPALAAVARNACP
FLTAGMRRNTADWLLDALEIHLSAQASRSIDDVGEAGRSPSLAVASLLLE
GLAAAAAFHHSEQDELVEALTKRYTEAARVRTPPPTPAAGTHGQEQEEGG
VLRWLASRGGMLEEGHGAVGSEVGKEGEEQGRGFSPFADEMWFRVSKGDL
PWEGWAMRQVLWPLVSRLVGPTANGSPSECHEAASALMASARKDVLRPVG
LCPPWSEEEGERIEDHGSERKSDAGAAGGGRASSRSTAAVSDPSLVESGR
QMPKDHSDAAAAANATASRAVLGLPSESEGVAGEGGVEDEQVEVQGIGGG
MVVGVGPAGFTGGLARPARVLIVEEPWQSIYLWSVVFVRTAWDVRLFDTR
TVRLFEVVDDEEEEEEVEEGDSDFDSNEDTMLREGMIMMTDSEKDDEDED
GEKVEEEEGDFVLPGRPKAVGGNVPADALV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026705Hid-1/Ecm30