prot_A-nodosum_M_contig892.18.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig892.18.3
Unique Nameprot_A-nodosum_M_contig892.18.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length214
Homology
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BLAST of mRNA_A-nodosum_M_contig892.18.3 vs. uniprot
Match: A0A6H5KKS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS0_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 2.020e-84
Identity = 136/228 (59.65%), Postives = 165/228 (72.37%), Query Frame = 0 
Query:    1 MYATSLPPRRNPLARVLDNYAPRFSPDEFPPIPVSFNPSWRTPPSKIW--------GDEEITRPCNTY------PARPHTMPGLTRYTRDSSARKTWNSFRENSTGRLHSVQQTHNLSDRSIDSGLIPPHLLDGSLPPTT-KPISSIDFFPPCKKPATAPPIRMGHQFRLLRKPTTDQMAAFKRGFILQDGPIRIVRHTSTDHTYTKENRHRKPRGNARNVLGGFCTS 213
            MYATSLPPR NP AR  +NYAPRFSPDE P +PV++ PSWR+PPSKIW        G+   T     Y       ARP T  G   + RDSSAR+ W + R+N TGRLH+VQ THN+SDRSIDSGLIPPHLLDGS+PP   K  +S+D+FPPC +PAT P IRMGHQ+RL+R     ++ A+KRG +L+DGP+RIVRHTS D T+ K++ HR PRG +RNVLGGFCTS
Sbjct:    1 MYATSLPPRPNPHARTAENYAPRFSPDELPLLPVNWVPSWRSPPSKIWEDPAGVKRGENGATTAATCYVSESAAAARPRTT-GSIGFVRDSSAREMWGTLRDNCTGRLHAVQ-THNISDRSIDSGLIPPHLLDGSVPPPQGKRATSLDYFPPCVRPATVPAIRMGHQYRLIRDTPAKRLEAYKRGAVLRDGPVRIVRHTSKDRTFMKKSAHRNPRGISRNVLGGFCTS 226
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BLAST of mRNA_A-nodosum_M_contig892.18.3 vs. uniprot
Match: D8LIB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB8_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 1.610e-30
Identity = 55/86 (63.95%), Postives = 71/86 (82.56%), Query Frame = 0 
Query:   97 VQQTHNLSDRSIDSGLIPPHLLDGSLPPTT-KPISSIDFFPPCKKPATAPPIRMGHQFRLLRKPTTDQMAAFKRGFILQDGPIRIV 181
            ++QTHN+SDRSIDSGLIPPHLLDGS+PP   K  +S+D+FPPC +PAT P IRMGHQ+RL+R     ++ A+KRG +L+DGP+RIV
Sbjct:    1 MRQTHNISDRSIDSGLIPPHLLDGSVPPPQGKRATSLDYFPPCVRPATVPAIRMGHQYRLIRDTPAKRLEAYKRGAVLRDGPVRIV 86
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig892.18.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKS0_9PHAE2.020e-8459.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIB8_ECTSI1.610e-3063.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig892contigA-nodosum_M_contig892:206820..218454 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig892.18.3mRNA_A-nodosum_M_contig892.18.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig892 206820..219586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig892.18.3 ID=prot_A-nodosum_M_contig892.18.3|Name=mRNA_A-nodosum_M_contig892.18.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=214bp
MYATSLPPRRNPLARVLDNYAPRFSPDEFPPIPVSFNPSWRTPPSKIWGD
EEITRPCNTYPARPHTMPGLTRYTRDSSARKTWNSFRENSTGRLHSVQQT
HNLSDRSIDSGLIPPHLLDGSLPPTTKPISSIDFFPPCKKPATAPPIRMG
HQFRLLRKPTTDQMAAFKRGFILQDGPIRIVRHTSTDHTYTKENRHRKPR
GNARNVLGGFCTS*
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