prot_A-nodosum_M_contig8919.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8919.2.1
Unique Nameprot_A-nodosum_M_contig8919.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length456
Homology
BLAST of mRNA_A-nodosum_M_contig8919.2.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 2.140e-34
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 0
Query:   46 CDGENNNAMCGLDGGDCCLCTCSHGSHYNCGSNGFTCLDPNVAGVKPSICVKSPSTLISCPAELQQEWIVENATQARGFANSSRCVGGSFNVTWKGKIVLDETITVFEGTVLNVIGG-DADAAIVGDGNNRLFAVANASLHLRNITVSQGNAMYGGAIASTSDSRLSFSRVVFSNNTA 222
            CD ENNNA C  DGGDCC CTC   S Y CG  GF+CLDP+   +    C ++P+    C AE Q+ W+VE++ QA+  A +  C GGSF V W+G + LD  I +  GT LNV GG +A A I G+G  RLF+V NA+L LR + +  G +  GGAIA+ S + L+F    F NN+A
Sbjct: 1982 CDLENNNAECNWDGGDCCECTCVD-SQYECGIQGFSCLDPSATDLYD--CGETPAAT-PCSAEAQEAWVVEDSAQAQALAANVNCSGGSFQVEWRGSVSLDAPIFIVHGTDLNVTGGGEASAVIDGNGTTRLFSVDNATLRLRGVELRSGFSAIGGAIAA-SGATLAFHNTSFVNNSA 2154          
BLAST of mRNA_A-nodosum_M_contig8919.2.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 9.800e-32
Identity = 85/218 (38.99%), Postives = 119/218 (54.59%), Query Frame = 0
Query:   17 LLVICCAGNGA-QIDDCTYYGNTSTIQNDRCDGENNNAMCGLDGGD----------CCLCTCSHGSHYNCGSNGFTCLDPNVAGVKPSICVKSPSTLISCPAELQQEWIVENATQARGFANSSRCVGGSFNVTWKGKIVLDETITVFEGTVLNVIGGDADAAIVGDGNNRLFAVANASLHLRNITVSQGNAMYGGAIASTSDSRLSFSRVVFSNNTAS 223
            L  +CC   GA Q D C      + I N  C+  NNN  C  DGGD          CC CTCS      C S  F CLDP+ A  +   C  +P T + C AE+QQ W+V+++ QA+  A++  C GGSF V W+G +V++    V +GT L++ G  + AAI G+   RLF V NA+LHL  + V+ G +  GGAIA+   + L+ ++  F  NTA+
Sbjct:   53 LFTLCCLRQGAAQSDSCA----VADIGNGLCEEGNNNVFCSYDGGDVSLVACSSLLCCYCTCSGAL---CQSVTFDCLDPD-ADDEFYECEAAPPTALPCSAEVQQTWVVDDSAQAQALASAVNCSGGSFEVEWRGTVVVESVFYVVDGTTLSITGDGSSAAIDGNAATRLFTVVNATLHLTGVDVTSGASTTGGAIAAAG-ATLTLNQTNFLRNTAT 261          
BLAST of mRNA_A-nodosum_M_contig8919.2.1 vs. uniprot
Match: A0A6H5JLP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP6_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 3.220e-25
Identity = 69/178 (38.76%), Postives = 104/178 (58.43%), Query Frame = 0
Query:   30 DDCTYYGNTSTIQNDRCDGENNNAMCGLDGGDCCLCTCSHGSHYNCGSNGFTCLDPNVAGVKPSICVKSPSTLISCPAELQQEWIVENATQARGFANSSRCVGGSFNVTWKGKIVLDETITVFEGTVLNVIGGDADAA-IVGDGN--NRLFAVANASLHLRNITVSQGNAMYGGAIAS 204
            +DCT Y    ++ N  C  +NN   CG DGGDCC C+C  G     G   F CLDP+    +   CV + +   +C  +L +EW+VEN   A   AN+  C GG+F+V W+G +++ +T+ + +GT +N+ G    A+  V DGN  +R+F V N+SL+L  +T+S G+ + GGAI S
Sbjct:   47 EDCTGY--PPSMGNGLCIPDNNTPECGYDGGDCCECSCQPGQFMCLGR--FDCLDPSFNTTE---CVTNTT---ACAPDLSREWLVENTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVATTASPAVADGNGESRIFGVINSSLNLHGMTLSNGHGVVGGAIFS 214          
BLAST of mRNA_A-nodosum_M_contig8919.2.1 vs. uniprot
Match: D7FV90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV90_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 4.730e-24
Identity = 72/196 (36.73%), Postives = 110/196 (56.12%), Query Frame = 0
Query:   30 DDCTYYGNTSTIQNDRCDGENNNAMCGLDGGDCCLCTCSHGSHYNCGSNGFTCLDPNVAGVKPSICVKSPSTLISCPAELQQEWIVENATQARGFANSSRCVGGSFNVTWKGKIVLDETITVFEGTVLNVIGGDADAA-IVGDGN--NRLFAVANASLHLRNITVSQGNAMYGGAIASTSDSRLSFSRVVFSNNTA 222
            ++CT Y    ++ N  C  ENN   C  DGGDCC C+C    +   G   F CLDP+    +   CV + +   +C  +L +EW+VE+   A   AN+  C GG+F+V W+G +++ +T+ V +GT +N+ G D  A+  V DGN  +R+F V N+SL+L  +T+S G+ + GGAI S          V FS ++A
Sbjct:  153 ENCTGY--PPSMGNGLCIPENNIPECEYDGGDCCECSCQPAQYMCLGR--FDCLDPSFNTTE---CVTNTT---ACSPDLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVIVPQTLWVSQGTTVNITGVDTTASPAVADGNGESRIFGVINSSLNLHGMTLSNGHGVVGGAIFSA------LGTVTFSGSSA 332          
BLAST of mRNA_A-nodosum_M_contig8919.2.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.260e-23
Identity = 80/238 (33.61%), Postives = 105/238 (44.12%), Query Frame = 0
Query:   46 CDGENNNAMCGLDGGDCCLCTCSHGSHYNCGSNGFTCLDP------------------------------NVA---------------GVKPSI---------------CVKSPSTLISCPAELQQEWIVENATQARGFANSSRCVGGSFNVTWKGKIVLDETITVFEGTVLNVIGGDADAAIVGDGNNRLFAVANASLHLRNITVSQGNAMYGGAIASTSDSRLSFSRVVFSNNTAS 223
            CD  NN   C  DGGDCC C+C  G  Y CGSNGF+CLDP                              N A               G   SI               C   P   + C  E+Q  W+VE   QA+  A +  C  GSF V W+G++ + + I +  GTVL + G  A + I G+   RLF V NA LHL N+ +S G ++ GGAIA+ + S L+F+   F  N A+
Sbjct:  161 CDSSNNYPSCDYDGGDCCECSCVDGHDYECGSNGFSCLDPACFDPALVAEFPDCDAGWLGLGDGFCDSELNTASCGWDGGDCCVCSCNGTACSISDFDCFDPNADEFFECQAPPPATLPCSVEVQLTWLVETPLQAQTLAAAVNC-SGSFEVEWRGRVAIVDPIYIGGGTVLTITGDGASSVIDGNTLTRLFTVNNAVLHLSNLNISNGASIVGGAIAAANSS-LTFNGTNFVGNQAT 396          
BLAST of mRNA_A-nodosum_M_contig8919.2.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.620e-19
Identity = 62/162 (38.27%), Postives = 89/162 (54.94%), Query Frame = 0
Query:   66 TCSHGSHYNCGSNGFTCLDPNVAGVKPSICVKSPSTLISCPAELQQEWIVENATQARGFANSSRCVGGSFNVTWKGKIVLDETITVFEGTVLNVIGGDADAAIVGDGNNRLFAVANASLHLRNITVSQG--NAMYGGAIASTSDSRLSFSRVVFSNNTASLG 225
            TCSH   Y   S+ F CLDP  +      C + P   + C AE+QQ W+V ++ +A   A +  C GGSF V W+G +V++  I V +GT++ V G  + A I G    RLF V +ASLHLRN+ +S G   A+ GG  A+ S   L+ + +V +  T   G
Sbjct:    4 TCSHADCY---SSLFDCLDPGSSNGFYE-CQEPPPATLPCSAEVQQSWVVADSAEALALAAAVNCSGGSFEVEWRGSVVVESPIYVRDGTIVTVTGVGSTAVIDGHAATRLFTVVDASLHLRNVNISYGASRAVGGGIAAAGSRVTLNHTSIVGNRATGHGG 161          
BLAST of mRNA_A-nodosum_M_contig8919.2.1 vs. uniprot
Match: A0A6H5K1P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1P8_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 9.520e-17
Identity = 56/150 (37.33%), Postives = 83/150 (55.33%), Query Frame = 0
Query:   82 CLDPNVAGVKPSICVKSPSTLISCPAELQQEWIVENATQARGFANSSRCVGGSFNVTWKGKIVLDETITVFEGTVLNVIG--------GDADAAIVGDGNNRLFAVANASLHLRNITVSQGNAMYGGAIASTSDSRLSFSRVVFSNNTAS 223
            CLDP+ AG +   C +     + C  E+QQ W+++   QA   A +  C GGSF V W+G +V++  I +  GTVL + G         D+ A I G+   RLF V + +LHL NIT++ G++  GGAIA  + S L+    +F  NTA+
Sbjct:   31 CLDPS-AGDEFYECSQPSPEALPCSLEVQQTWVLDEQEQAHALAAAVNCSGGSFQVEWRGTVVMEIPIVIGAGTVLTISGVDSSTVDDDDSGAVIHGNEGTRLFTVGDTALHLSNITIAFGSSTVGGAIA-VAGSTLTLVETMFITNTAT 178          
BLAST of mRNA_A-nodosum_M_contig8919.2.1 vs. uniprot
Match: A0A6H5JL43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL43_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 8.070e-10
Identity = 42/94 (44.68%), Postives = 54/94 (57.45%), Query Frame = 0
Query:  133 GSFNVTWKGKIVLDETITVFEGTVLNVIGGDADAAIVGDGNNRLFAVANAS-LHLRNITVSQGNAMYGGAIASTSDSRLSFSRVVFSNNTASLG 225
            G F+V W G+I + ETI V  GT LNV G    A   G G+ +LFAV   S LHL N+T+S GN  +GGA+ +   S   F    FS+N+A  G
Sbjct:   27 GDFSVRWVGEIFVAETIRVINGTSLNVTGAGPGAIADGSGSTQLFAVDGGSNLHLSNMTLSNGNTSFGGAVFANQSSVSFFGTTSFSSNSAYYG 120          
BLAST of mRNA_A-nodosum_M_contig8919.2.1 vs. uniprot
Match: D7G1E0_ECTSI (EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E0_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 2.150e-8
Identity = 45/111 (40.54%), Postives = 62/111 (55.86%), Query Frame = 0
Query:  115 VENATQARGFANSSRCVGGSFNVTWKGKIVLDETITVFEGTVLNVIGGDADAAIVGDGNNRLFAVANAS-LHLRNITVSQGNAMYGGAIASTSDSRLSFS-RVVFSNNTAS 223
            V     +   ANS  C  G F V W  ++ +  TI V +GT LN+ G    A   G G+ +LF V   S LHL ++T+S GNA+ GGAI S +DS +SFS    F++N A+
Sbjct:  229 VSRTEDSADLANSVLCSNGDFIVQWDEEVFVTATIRVSDGTSLNITGTGPGAIADGGGSTQLFVVEGGSTLHLSDMTLSNGNALSGGAI-SAADSSVSFSGNTSFNSNFAN 338          
BLAST of mRNA_A-nodosum_M_contig8919.2.1 vs. uniprot
Match: D7FSP3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP3_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 4.540e-5
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0
Query:   41 IQNDRCDGENNNAMCGLDGGDCCLCTCSHGSHYNCGSNGFTCLDPN 86
            I +  CD  NNN+ C  DGGDCC C C   + Y CG++GFTCLDP+
Sbjct:   35 ISDGMCDSSNNNSGCEYDGGDCCSCDCFDDT-YECGTDGFTCLDPS 79          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8919.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FHG7_ECTSI2.140e-3447.19LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K0E9_9PHAE9.800e-3238.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JLP6_9PHAE3.220e-2538.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV90_ECTSI4.730e-2436.73Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G5Y7_ECTSI1.260e-2333.61Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FTL7_ECTSI1.620e-1938.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K1P8_9PHAE9.520e-1737.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL43_9PHAE8.070e-1044.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1E0_ECTSI2.150e-840.54EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
D7FSP3_ECTSI4.540e-554.35LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 270..287
e-value: 0.023
score: 15.1
coord: 215..230
e-value: 0.0017
score: 18.7
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 214..233
e-value: 4.5E-5
score: 21.1
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 143..424

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8919contigA-nodosum_M_contig8919:21394..22761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8919.2.1mRNA_A-nodosum_M_contig8919.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8919 8986..22761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8919.2.1 ID=prot_A-nodosum_M_contig8919.2.1|Name=mRNA_A-nodosum_M_contig8919.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=456bp
MGKGSAMGGHVLHVIFLLVICCAGNGAQIDDCTYYGNTSTIQNDRCDGEN
NNAMCGLDGGDCCLCTCSHGSHYNCGSNGFTCLDPNVAGVKPSICVKSPS
TLISCPAELQQEWIVENATQARGFANSSRCVGGSFNVTWKGKIVLDETIT
VFEGTVLNVIGGDADAAIVGDGNNRLFAVANASLHLRNITVSQGNAMYGG
AIASTSDSRLSFSRVVFSNNTASLGGGAIYLTNASTLTVGEDTDFSNNIA
SDGGALYITSSSAVWGEGKTSFTDNAATSGNGGALYVTKGSSTVWTVTSH
FLSNTAQNDGGVLFLAGHSNATWNAVSNFTANDAQRNGGALLVEEGSRAV
WTEESHFFSNNARDDGGALYVRDGSSVHWTAVSQLVGNSAGNNAGALGLL
NGCSGVWDATSRFSDNNANRSGGALNVWEASYVKWTASSNFSSNSAGEDG
GALYLW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence