prot_A-nodosum_M_contig89.77.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig89.77.1
Unique Nameprot_A-nodosum_M_contig89.77.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length112
Homology
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BLAST of mRNA_A-nodosum_M_contig89.77.1 vs. uniprot
Match: A0A6H5L4Y6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y6_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 3.260e-10
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 0 
Query:   30 SRTRLNFGQKIELLGLLREKVTYGEIARRLKCGTTAIGKIAKERAVLEEDHALGGGRDCASKSTRGGAFPKVQ 102
            +RTRLNFGQ++E+L LL EK TY EIARR    T+AI  I  +R  LE+  A    R   SKS+R G FP+++
Sbjct:  102 TRTRLNFGQQLEVLKLLDEKTTYAEIARRYSISTSAISLIKGKRQQLEQAAATNA-RSTTSKSSRRGDFPELE 173
[Close]
BLAST of mRNA_A-nodosum_M_contig89.77.1 vs. uniprot
Match: A0A6H5KNH6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH6_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 4.350e-10
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 0 
Query:   30 SRTRLNFGQKIELLGLLREKVTYGEIARRLKCGTTAIGKIAKERAVLEEDHALGGGRDCASKSTRGGAFPKVQ 102
            +RTRLNFGQ++E+L LL EK TY EIARR    T+AI  I  +R  LE+  A    R   SKS+R G FP+++
Sbjct:  102 TRTRLNFGQQLEVLKLLDEKTTYAEIARRYSISTSAISLIKGKRQQLEQAAATNA-RSTTSKSSRRGDFPELE 173
[Close]
BLAST of mRNA_A-nodosum_M_contig89.77.1 vs. uniprot
Match: A0A6H5KEK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK9_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.040e-9
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 0 
Query:   30 SRTRLNFGQKIELLGLLREKVTYGEIARRLKCGTTAIGKIAKERAVLEEDHALGGGRDCASKSTRGGAFPKVQ 102
            +RTRLNFGQ++E+L LL EK T+ EIARR    T+AI  I  +R  LE+  A    R   SKS+R G FP+++
Sbjct:   81 TRTRLNFGQQLEVLKLLDEKTTHAEIARRYSISTSAISLIKGKRQQLEQAAATNA-RSTTSKSSRRGDFPELE 152
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig89.77.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L4Y6_9PHAE3.260e-1050.68Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH6_9PHAE4.350e-1050.68Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEK9_9PHAE2.040e-949.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig89contigA-nodosum_M_contig89:783343..784709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig89.77.1mRNA_A-nodosum_M_contig89.77.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig89 782954..784709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig89.77.1 ID=prot_A-nodosum_M_contig89.77.1|Name=mRNA_A-nodosum_M_contig89.77.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=112bp
STGKRKADNTRGRGNIETSKKHASDSKSKSRTRLNFGQKIELLGLLREKV
TYGEIARRLKCGTTAIGKIAKERAVLEEDHALGGGRDCASKSTRGGAFPK
VQPRSAMKTQA*
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