prot_A-nodosum_M_contig89.69.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig89.69.1
Unique Nameprot_A-nodosum_M_contig89.69.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length283
Homology
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BLAST of mRNA_A-nodosum_M_contig89.69.1 vs. uniprot
Match: D8LB37_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB37_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 1.300e-133
Identity = 199/280 (71.07%), Postives = 231/280 (82.50%), Query Frame = 0 
Query:    1 MYNLDGVALSGSLLASLFNEAASPYAGAETRSGMRYTDGLLFGSVSKRLGTETHDTHEQRSTTHREAVLSGYVRSPDRCGFYDAFGSVDEKRLARLIPPGERLAGFFVVRKGGSTRPSLREMEIFRSLASSALSQGQPPVLLMACLRLREGAPTQMFQYQCMAAQGGKEEQRGAGSSSRRPRKVEVMSCRISNLTMDSAAEYSAVRPTPLGPLGMAGPQHSVLEEMFGAVPPPHVIEAEALLDTGMQTMEALVSELKAVENNVVRLQLENRLMERVMSRR 280
            MY+LDGVALSGSLLASL NEAASPYAG+E R G RYTDGLLFGSV++R GTET D HE+R+TTHREA LSGYVRSP RCGFYD FG++DE RLA LIP G+RLAG+FVV KGGSTRPSLRE+E+FR + +S+ + GQ PVLL+ACLRLR+GAPTQ FQYQC+ AQGG    +GAG       ++EV+ CRI+NLTMDS+AEY  VRP+P+ PLG+ G Q S LEE FG VPPP+V EAEALLDTG++TME LVSELK VEN VVRLQLENR MERV+  R
Sbjct:    1 MYSLDGVALSGSLLASLLNEAASPYAGSEPRKGTRYTDGLLFGSVNRRQGTETEDDHERRATTHREAALSGYVRSPARCGFYDEFGAIDEGRLALLIPQGQRLAGYFVVHKGGSTRPSLREIEVFRGMVASSSASGQLPVLLVACLRLRDGAPTQSFQYQCLTAQGGVGGPQGAG-------RLEVLPCRINNLTMDSSAEYGHVRPSPVVPLGVEGAQQSALEEAFGPVPPPYVSEAEALLDTGIKTMEDLVSELKLVENTVVRLQLENRCMERVLMNR 273
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BLAST of mRNA_A-nodosum_M_contig89.69.1 vs. uniprot
Match: A0A835Z179_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z179_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.280e-40
Identity = 93/270 (34.44%), Postives = 146/270 (54.07%), Query Frame = 0 
Query:    2 YNLDGVALSGSLLASLFNEAASPYAGAETRSGMRYTDGLLFGSVSKRLGTETHDTHEQRSTTHREAVLSGYVRSPDRCGFYDAFGSVDEKRLARLIPPGERLAGFFVVRKGGSTRPSLREMEIFRSLASSALSQGQPP--VLLMACLRLREGAPTQMFQYQCMAAQGGKEEQRGAGSSSRRPRKVEVMSCRISNLTMDSAAEYSAVRPTPLGPLGMAGPQHSVLEEMFGAVPPPHVIEAEALLDTGMQTMEALVSELKAVENNVVRLQLE 269
            +++D V+  G LL SLF+EA +  A       + Y +GLL GS ++R+ + T D HE  +    E VL  ++ +  RC FYD  G V +++L       ER AGFFVVR+GG  RPSLRE+E++R++ +     G P   VLL+  + +  G+ TQ F+Y C+A     E+  G         K++ + CR+ NL  DSA ++    PTPL P  ++  +   L + +    PPH+++ E L    M +++  + E+ A E  V +LQ E
Sbjct:    1 FDVDAVSFPGPLLVSLFHEAGA--AATPRCPCLSYKEGLLVGSCTRRMVSSTADNHEAETKAQHELVLQQFITTGGRCSFYDGLGGVAQEKLKGATKQLERWAGFFVVRRGGGMRPSLRELEVYRNMRALP---GVPHSFVLLLLTITIAPGSNTQSFKYYCLA-----EDLSG---------KLKPLPCRVRNLLHDSATDFGRFYPTPLPPDLVSKAKECGLTDAYSGDMPPHLVQQEDLFKATMTSLQEALQEVAAAEARVRQLQAE 251
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig89.69.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB37_ECTSI1.300e-13371.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z179_9STRA1.280e-4034.44Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 249..276
NoneNo IPR availablePANTHERPTHR31728:SF5OS07G0540200 PROTEINcoord: 5..203
IPR023238FAM175 familyPRINTSPR02051PROTEINF175coord: 9..27
score: 28.07
coord: 105..121
score: 30.81
coord: 188..202
score: 33.33
coord: 80..99
score: 33.33
IPR023238FAM175 familyPANTHERPTHR31728ABRAXAS FAMILY MEMBERcoord: 5..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig89contigA-nodosum_M_contig89:660713..675561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig89.69.1mRNA_A-nodosum_M_contig89.69.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig89 660713..675809 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig89.69.1 ID=prot_A-nodosum_M_contig89.69.1|Name=mRNA_A-nodosum_M_contig89.69.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=283bp
MYNLDGVALSGSLLASLFNEAASPYAGAETRSGMRYTDGLLFGSVSKRLG
TETHDTHEQRSTTHREAVLSGYVRSPDRCGFYDAFGSVDEKRLARLIPPG
ERLAGFFVVRKGGSTRPSLREMEIFRSLASSALSQGQPPVLLMACLRLRE
GAPTQMFQYQCMAAQGGKEEQRGAGSSSRRPRKVEVMSCRISNLTMDSAA
EYSAVRPTPLGPLGMAGPQHSVLEEMFGAVPPPHVIEAEALLDTGMQTME
ALVSELKAVENNVVRLQLENRLMERVMSRRDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023238FAM175