|
|
Homology
BLAST of mRNA_A-nodosum_M_contig89.69.1 vs. uniprot
Match: D8LB37_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB37_ECTSI) HSP 1 Score: 390 bits (1001), Expect = 5.020e-133 Identity = 199/280 (71.07%), Postives = 231/280 (82.50%), Query Frame = 1
Query: 1 MYNLDGVALSGSLLASLFNEAASPYAGAETRSGMRYTDGLLFGSVSKRLGTETHDTHEQRSTTHREAVLSGYVRSPDRCGFYDAFGSVDEKRLARLIPPGERLAGFFVVRKGGSTRPSLREMEIFRSLASSALSQGQPPVLLMACLRLREGAPTQMFQYQCMAAQGGKEEQRGAGSSSRRPRKVEVMSCRISNLTMDSAAEYSAVRPTPLGPLGMAGPQHSVLEEMFGAVPPPHVIEAEALLDTGMQTMEALVSELKAVENNVVRLQLENRLMERVMSRR 840
MY+LDGVALSGSLLASL NEAASPYAG+E R G RYTDGLLFGSV++R GTET D HE+R+TTHREA LSGYVRSP RCGFYD FG++DE RLA LIP G+RLAG+FVV KGGSTRPSLRE+E+FR + +S+ + GQ PVLL+ACLRLR+GAPTQ FQYQC+ AQGG +GAG ++EV+ CRI+NLTMDS+AEY VRP+P+ PLG+ G Q S LEE FG VPPP+V EAEALLDTG++TME LVSELK VEN VVRLQLENR MERV+ R
Sbjct: 1 MYSLDGVALSGSLLASLLNEAASPYAGSEPRKGTRYTDGLLFGSVNRRQGTETEDDHERRATTHREAALSGYVRSPARCGFYDEFGAIDEGRLALLIPQGQRLAGYFVVHKGGSTRPSLREIEVFRGMVASSSASGQLPVLLVACLRLRDGAPTQSFQYQCLTAQGGVGGPQGAG-------RLEVLPCRINNLTMDSSAEYGHVRPSPVVPLGVEGAQQSALEEAFGPVPPPYVSEAEALLDTGIKTMEDLVSELKLVENTVVRLQLENRCMERVLMNR 273
BLAST of mRNA_A-nodosum_M_contig89.69.1 vs. uniprot
Match: A0A835Z179_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z179_9STRA) HSP 1 Score: 152 bits (383), Expect = 4.150e-40 Identity = 93/278 (33.45%), Postives = 149/278 (53.60%), Query Frame = 1
Query: 4 YNLDGVALSGSLLASLFNEAASPYAGAETRSGMRYTDGLLFGSVSKRLGTETHDTHEQRSTTHREAVLSGYVRSPDRCGFYDAFGSVDEKRLARLIPPGERLAGFFVVRKGGSTRPSLREMEIFRSLASSALSQGQPP--VLLMACLRLREGAPTQMFQYQCMAAQGGKEEQRGAGSSSRRPRKVEVMSCRISNLTMDSAAEYSAVRPTPLGPLGMAGPQHSVLEEMFGAVPPPHVIEAEALLDTGMQTMEALVSELKAVENNVVRLQLENRLMERVM 831
+++D V+ G LL SLF+EA + A + Y +GLL GS ++R+ + T D HE + E VL ++ + RC FYD G V +++L ER AGFFVVR+GG RPSLRE+E++R++ + G P VLL+ + + G+ TQ F+Y C+A E+ G K++ + CR+ NL DSA ++ PTPL P ++ + L + + PPH+++ E L M +++ + E+ A E V +LQ E ++ +
Sbjct: 1 FDVDAVSFPGPLLVSLFHEAGA--AATPRCPCLSYKEGLLVGSCTRRMVSSTADNHEAETKAQHELVLQQFITTGGRCSFYDGLGGVAQEKLKGATKQLERWAGFFVVRRGGGMRPSLRELEVYRNMRALP---GVPHSFVLLLLTITIAPGSNTQSFKYYCLA-----EDLSG---------KLKPLPCRVRNLLHDSATDFGRFYPTPLPPDLVSKAKECGLTDAYSGDMPPHLVQQEDLFKATMTSLQEALQEVAAAEARVRQLQAEEASLQEAL 259
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 3760.EMJ06914 |
| Model size | 1097 |
| Max annot lvl | 35493|Streptophyta |
| KEGG ko | ko:K20799 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043565,GO:0044212,GO:0044424,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 |
| Exons | 7 |
| Evalue | 1.84e-08 |
| EggNOG OGs | 28HH8@1|root,2QPV5@2759|Eukaryota,37KF4@33090|Viridiplantae,3GFJV@35493|Streptophyta,4JGGZ@91835|fabids |
| Ec32 ortholog description | FAM175 family |
| Ec32 ortholog | Ec-27_005360.1 |
| Cds size | 849 |
| BRITE | ko00000,ko03036,ko04121 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870315.073087-CDS-A-nodosum_M_contig89:660712..660808 | 1680870315.073087-CDS-A-nodosum_M_contig89:660712..660808 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig89 660713..660808 + |
| 1680870315.0864506-CDS-A-nodosum_M_contig89:669842..669948 | 1680870315.0864506-CDS-A-nodosum_M_contig89:669842..669948 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig89 669843..669948 + |
| 1680870315.097064-CDS-A-nodosum_M_contig89:670860..670961 | 1680870315.097064-CDS-A-nodosum_M_contig89:670860..670961 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig89 670861..670961 + |
| 1680870315.1081758-CDS-A-nodosum_M_contig89:671453..671519 | 1680870315.1081758-CDS-A-nodosum_M_contig89:671453..671519 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig89 671454..671519 + |
| 1680870315.1192508-CDS-A-nodosum_M_contig89:674219..674377 | 1680870315.1192508-CDS-A-nodosum_M_contig89:674219..674377 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig89 674220..674377 + |
| 1680870315.137429-CDS-A-nodosum_M_contig89:674594..674817 | 1680870315.137429-CDS-A-nodosum_M_contig89:674594..674817 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig89 674595..674817 + |
| 1680870315.1498547-CDS-A-nodosum_M_contig89:675462..675561 | 1680870315.1498547-CDS-A-nodosum_M_contig89:675462..675561 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig89 675463..675561 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870315.1635633-UTR-A-nodosum_M_contig89:675561..675809 | 1680870315.1635633-UTR-A-nodosum_M_contig89:675561..675809 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig89 675562..675809 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig89.69.1 >prot_A-nodosum_M_contig89.69.1 ID=prot_A-nodosum_M_contig89.69.1|Name=mRNA_A-nodosum_M_contig89.69.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=283bp
MYNLDGVALSGSLLASLFNEAASPYAGAETRSGMRYTDGLLFGSVSKRLG
TETHDTHEQRSTTHREAVLSGYVRSPDRCGFYDAFGSVDEKRLARLIPPG
ERLAGFFVVRKGGSTRPSLREMEIFRSLASSALSQGQPPVLLMACLRLRE
GAPTQMFQYQCMAAQGGKEEQRGAGSSSRRPRKVEVMSCRISNLTMDSAA
EYSAVRPTPLGPLGMAGPQHSVLEEMFGAVPPPHVIEAEALLDTGMQTME
ALVSELKAVENNVVRLQLENRLMERVMSRRDA* back to topmRNA from alignment at A-nodosum_M_contig89:660713..675809+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig89.69.1 ID=mRNA_A-nodosum_M_contig89.69.1|Name=mRNA_A-nodosum_M_contig89.69.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=15097bp|location=Sequence derived from alignment at A-nodosum_M_contig89:660713..675809+ (Ascophyllum nodosum dioecious)
ATGTACAACCTCGACGGAGTGGCGCTCTCGGGTTCGCTCCTTGCTTCATT
GTTCAATGAGGCAGCATCGCCTTATGCTGGTGCAGAAACACGATCGGTGA
GTTCCAAACGGAAATATTATGTACGAGACTAGTCTAATACAGCAGTACCT
ACAGTACAATCATACTGAGTGCGGAGATAGGGAAAGTCGGTCCGCTTCGG
GCATCGCGATCGTATTGCTGAGGCCGCAAGCACGCTCCAGAAGGAGTGGC
GAAGATGTTTGTCTAGACCTCTGGCAGTATTTCACTGCTGTATTACATGG
TATTTCCTGCAGCTTCCTTTGTGTCACGCCCGCCTACGGTACCTAGCCTA
CAGACTACAGAGGAGTTTCAAGGCTGAACGCATCTAAACCTTCGGAGCAT
CCACCAGGCAGAGGGGAAATTATACAAGCAGTAGTAGTAATTATACAAGC
AGTAGTAGTAGTAATTATACAAGCAGTAGTAGTAATTACACAAGCAGTAG
TAGTAAATATGTACCGTTAACCGGGATTCGAACTCGCGTCCCAACGTGTC
AGAAGGTTACGAGGTTACTTTTGAGCTACCGGGGCGACCGGGAAAGGTAG
CACTTAACCACAAGTTGATATATATATATGTAGACCACGCATCGACGCGA
ACGCTTTTAACCTCTCAATAATAGGTGTTCGTCAGAGTCGATGCCCACGT
TCAGGTCAAGGGGTGGTTTGAAGGGGGTTTGTATTATTAATAGGTGCCAC
TAGGCGTACTTTACAAATCTAAGGAGCATAAAAAATGAAAATAACGTTTC
TTTTAAATCAGTGCCTCCGTTTGTTCTCAAATTTTGGAAGTAGTGCCTTA
GACAGACCTTTCAAAATTTTAAATTTTGGAACGTTTCCAGGTTTTGGGAT
TTTTTTGGCTTTGTCTAAACTGACCCTTGGCCGGTCTTATCGGCAAGGGA
AAAAAGCCAAATCGTGTGGAATGGTGTCATGAACACCGATCGGGTATTGA
CAATAAAACCACTTTTGCCGTACAGTCCTACTTTTGACATGACAAGATGT
TATCGGACTTATCGACTTTGTAAATTTGAGAACAGCATTCCAGCCTTCTA
ATCGCAACAAGAGCTCAGTCGCCGCGTCTGCACCCGTAGAACCCTCAACA
GCCAGGGCCGTCTCCCTAGCAGTCTCGCTGATTGAGCTGATCGATAGTAT
AATACAATATAGTCTACCAGATATATAATGGTCCCAGCCCAAGGAGAGGA
TGCAGTTCTCACCCAAGAGAACCAGCGGTCTGCTCAGCGCCAGCGCGTTA
ACCCCCAAAGCCGCCAGACTGACGGCTTCTGAAGAAATTGGCGCCAAAAA
CGCAGCCGGTAATCAAGCGGGTACTCATGCGCCATGGGGCCAACCCCCGA
GCTTATTACGCGGGTTCTCTGTGGTCGGATCTGCTGCTGGCATACGTAGC
CCCGCCCTCTTCAGCAGACCTGCGCTCCTCAGGTGCGCGCATCCCAGAGC
CTGCTGCTGAGGAGCTTGGTGCTTTCGAAGCCGTACACTCCCGCACGATA
TCCTCTTGTATTTTTGTATTAAAAAATCCAGCGGAGATCGAGAATCTGTC
GGCGCCAAGTCTGTGTCCGTAGATTGGCGAGCAACTTCTGCAGTCTCTCC
AGCAGTCTTCCCAGTCACCTCTAAGTTCCTCAGCAGTTCATGAGACAAAA
GCTCCAAAAACTAGTCTAAAATCACACCCGCCGGCACCACAGCTGCAGAG
CTACGCCTGTCCTTATTTGCGACCTCCGATCCCCCAATCCTTCCAACATC
GCAGATGGCCCTTTTTACCGTAAGTATCGGAGTCTTGGCACACCCCTTAC
ACTAACTTTCAAGGCTCGATTGGTCCACAACCAAGAGGATGTGAACACCG
ACCGATACGTCTAAAGAAAGCTCTCGACGAGATCTTTCGAAAACCGCTCT
TTTCGGCATTGACACCTCTTGGTTGTGGAGCAATCGAGCCTGGAAAGTCA
GTCTAGAGGTATGCCAAGACTCCGATACTTAGAGGCGTTTTAGACCTCTA
ATTTTTTTTGGAAAGTTTGGAAGACATGCTCCTGCTATTGCAACCCCTTT
GGGTAACAGTCCTGTCTTTCGTGCAGGCCAAGGGAAACAAGGATGATAGG
TCAGCTCAAGCTGTGCAGGATGAGGCTTCCTTATCGCCAGCGGCAACAAG
AGTGGGCTCCTCGATGGCACCGAGACCCCAAGTTGGCAATGTGCACAGCA
GTCACAGCGTTGCGGCAACGATCCGGCTGCCGGAGATGGGGATGACTGCA
ATCACACGCGAGTGGCGCTCTTGGGATAATTGTCCGGACAAGTCCGAGAG
GGAAGGGACCTTTCAGAGGAAATACTTTCAAACGTGGTGTGCTCCAGGAT
CTACTGACATCTCTTGTGGCGGTCTCTGAATATTATGTCTGTGGGACTTC
TGCGAGGTCCAACGTCCGAAAAGATGTTCAAACTGTCCCGAGACGTATCA
AACTATCTAGGACGAGGATGCCTTTTTCCAAACCTTTACCTCAACTTCTG
ACATAATAGGTCTGTAATGATTTTCTAAAATTTCCAAGATTACAGTACAC
AACTTGGAAACGTCTATTTAAGGTCTAAAACGCCCCTTACGGTATATTAT
TTCGCCAACGTCGAAAGCAAGAAGACCAGACCCTATCTTATGTATCCACC
GCCCGATTCGCTGAATGAAAGCTCCGAGGAGTGCAGGCGAGCGTCCTCAG
CACCAGGTCTTAGGAGTGTAGTACAACTAACTAACTCTACGGGCCTTGGG
CTAGGGTCCGATGTCAAAGAGAGTGTGAAATTTGACGTCTGCTGGATCCG
TTTTGAACGCCAAAAAGGAGTAGTTTTTTTGGCTTTGGTGAATTCAATAC
GTCAAAATGCCAAATTTGACGTCGGATTTCACTGTCAACACTTTTTTTAA
CGTTTTTGACACGATTTGGCATTGTTTTGTTCGCCGCCGATAAGAACGAC
TCTCAGCCATCTAAGCCTCCTTTATAAGTACGCACTTGCTTCCATCAGTT
ACGAGTACTAAGACTGTTTTTTTCTCTTTATTTTTTGCCGATGGGGTCGA
TCAATTTCCGAAGGTATCAATCTTACAGGTTACGTACATAAGTGCAAATG
ATCTCTGGATTACGTTATGATCTCATGCAATCAATAGCAGAATCGTGTCG
AATAGAAGCTAATCGGAGCCCATCGTTCCACGTTACACTCGTACCAATAG
TATATTCACTATTATGTGGGCACTCACAAGGTAAACGGTAAGGTAAACGA
CAAGGTAAGGTAAACGAGCATTCACTATCATGTCTGCGTTATAGAACAGC
TCTGCAAGTGTTTCCACACAAAGTAAAGCGTTCACGCACAAGCCGTCAGT
GACGGTCTCGTCTCTGACGCGGTCGGTGAACACGTCCGGCGAGGCTGTAG
GCCGCCGGCATTCACCAGTACACTATCGAATATATTAAGCTACTATTATT
ATGAATAATGCGGTTTTTATAATGGAACGACGAGGAGGGGAACGAGATAA
AAAAAACACACGTACAAGATACTCTGAGCAAGAGCTGAAAGATGGGAGAC
AACTAACCAACCAATCAGCGGCATAAAGAGGGTGAAAGATATCACATTTG
GCTCCCAGAGGTAATTATGCTCAACGAAGAGGACAGCTTATTGCGCCACT
ATGCAAAAAAATAATAATGCCACAGAACTGAAAATATTGATACAAGATAA
AGCAACTACTGACTGCTACTGACTATGTATACGAAAAGGGCAAACATAGA
CGTTACTCAAACGCACGTGCGGCGCACAACATAGACAAACAGACACACGA
GAGGAAGATCAATGTGCACTGTTAGCAAACGGTCCATGATTGGTGCTTGG
GGACTCTCAAGTTATAGCAGCAACCAGAACGTGGGCGCGTCCGACGACGT
CCCACGGATCGTATCTTTGGCTTTAGTATTATATTTCAACAAAGAATTGC
TTAGCTCACTAGATTAGATAGCGATTAGATACCCGTGCGCACTTGTTTTT
TTTGTTTTATGCCGGCGGCACCGCTCCGGGGATGCTGCTGTACTTGAGGC
AATTCAAATAGCGCTGTTGAGGCGTCTCAATTTCCCGACAGTTACCACAA
TGGTGATCTTGTCCGCCTCTTCCTCCATGCGACCATCAGTGATCATTCTT
GTGTCCCCCTTTTTGTACATGGTCCCGTAATAGCACCATGTTCCAGGGTC
TGATGGCATTAGTCCGATAGTATCAGTCTAATAATAGACTATTATTAGTC
TAATAGTTTGACGCGGCAGGTTGTCCGGTTGCCCATGATCCAAAACACGC
GGAATCTATGCATGTATATATAGCATTCGCTCTTGCCGCGCTTTTTGAAT
CGCGTTGGGGCCGTTGATGGCTTCGACACCTCCACAGCAAGATGATTCTC
TATTTTTTGTGGTAACTAAAACTATTTAATAGTGTGCTTACGGCTGAGTG
GGTCCGTCAGAGCCCATGCAATCAAAACATGGAAAGGAGTAGCAAGACAC
GTCTAGTAATAATTAATAGCAAGATACGTCCATTAATAGCAAGGCGCGTC
TGAGTGGTACCGATATAGACTTATACATGAGTTGCTTATTACTTACAGCA
TGTGAAACTATCGTCATTATCGTTACCGAATATGTGGATCCCAGCCATTT
TGTTTCCTGCCCGTTACCATCAACTGGTACTTTCAACACGCCCACTTTAT
ACCAACAGTGGGTTTGGGAAAGAGAGGCGCATATCAATTGGTCCATGGTG
ACCTGCCAAGGCAGCACTCGTTCGGAACTATCTTGAGGTTTACTGGCCCT
GTGCCGGCGGActCTCGGCAGTGAACGCCATCGGTACGCAATTGCGTGAC
CCGATAAACTCGGTACTGACCCGATGGCGTATGGCGGTTAAAATAAATAA
ATGGACGCCGCCGCGGAACTCTGGAGGAATCCCGTAAGAAAGCACCAGAT
TCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGACGGCTGAA
CCCACCTCGCGAGACCAAATTTTCAGGCACGCACGAGGACAGGGGAATAT
TCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGG
TTGATCCATACTCTTCTATATGTGATGACCATACATACATAATAGTGCAG
TCATCGGGCCATTCATTCGAGACGTTGGACCATGATTTTCGAAAGGTGAC
GAGCTACGAGGCTAAAACAACGACGTCATTATCCTCTAGAGCTATAGTAG
AAGCTACGAAATTAGAGGAATATGCGTCTCAAAACTGTTGACAGGTCAGC
TCTAAGACTAAACCCCTGAAGACCCGTTCATCCCTCTGTCGAGGATTTTA
GTCTAGTCGAGTTCTACGAACCGGGATGCATACATGATTGATAAAATATG
AAGTATCACCTCACGGGCACAAGACCTACTACTACTGTAGAGTAATAATA
TTATAGTTATTTAGTTGCAGGGTGTCGATGCCCTTAACGAGCTCTAACAG
GCATAAACAACGTACAGTACTGGTAGACTTTAAGCGTTGTGGCTGATGTT
GCTGTCGAGAACCTGTATGCAACAGCAACACTTCGTGGTCGCCGTTTACA
CATTACTAGTAAACAGTATGTTATATCTCTCCTCTACCTTTCCTGTTCAT
GCGAGCTTTATGACCAGTCCTACTTCACCATACACGGATACTTGGTACAA
AAGTACTAATCATATTCATATTATTTGTTCAGGGGTGTTGAATCTTGGAG
GACAGCGGCATTTCATGTGCGCGGCGTGTCCCTTCGCGAGGACAATTTTA
GCCTTTCAAACAGTACCACAGTTTGGCGAAGCATTCGCCCATCTCTACTT
ACTTTTGACGCGATGTGATCGCAAAAAACCCCGTTTGTGCCCCCGTCTAG
AGTTTTATGTTGCTACAGTATGATGAACCAAAATCTCGGGCTAGACCAAG
ACGCAGCCGCGACCCAAGAGTTTCACCGGCGGCCAAGCTGATATGCTGGT
TTGGGTCGATCGCTTTCAAGGAGCGTGATGTCGTGTCCGAAGTGCTGCTA
CACGCGGTCATGTGTAATTATACTCCTCGGGACATTCGACATTCGTTACT
AATACAAGGCTCGGCAGCCACAGCATGGCGTAGGGATCGCTGCCGGAGGA
GTACCGCTGGGTCTACCGGTGTCGCTTAGCTCTAGACTCCTAGATTTTGT
GTTTTACCTTTCTATGGCAGATATAATAGTCAGTCGCTCTTCTTCGGGAG
TGTTACCGCACATTTGACATAACAGTGATAATACTAATATTAAGACTGTA
TGTTCGATCTCACGATATAATGAAAGCTTTCGTGCGGAATGACAATATGG
CGGACAGTATGCTCGGTGTTAGTGACGCTTGTATTTTACGAAAATCTTAA
GGGGGCGGTAGAGGGCATCTCGAGTTCACACCCGATGTCGCCCCAAAATC
GCAAGCCATTTACAAATCCCGTTCAGATCACACTTCATACAGTGCTATAA
ATACTACCGGTATAATTTACTGTGCCGAACGTGGAGAGCTATCAGCTCTT
GCCATCCAGCTCTTCGTTGTTTTTCTCTCTTGAAACACCCCTCCTGCCCC
CTTACAAATATCTGCTCTCGGGGGATCGTTTTCAGCAAAAGCAACACAAA
CGCCTAATATATTTCGAGAACTCCTTCATCAAACCTCCGATTCGCGACTA
TTAATAGGGCTGCTCAATAAGCTGCTTCGGATCCTCGAAGCCTTGAGTGT
GGTGCGGGTCGTGGTAAGAAAGCGACAACGTTTTCCCTTGGACGGTGTTT
GGAAATAGAGGCAGACCACCGTGCGCACGAGGTTGTATGTCGGTTAGCAG
GTGGTTGGAGAGCTGGAGGGCGCGGGGCAGCATGACATACGACAATGATC
AAGGCGAGAAGGGGAGTGGTCGATAGAATGCGTGGCAGAAGTCACACGGG
CTTCGAAGATCAGAGGGGGCTAGAGAGCCGCCACGCATCAAAATCGAGGA
CATAGGGGACATGCTCCGATAAATAGTGAACGGAGGACGCTGTTTATTGG
TAGGCACGCATGGAGGAAGGATGAAGAGAGCGCGGCCGAAAGAGGAGAGG
AGAGGAGAGTTGCCAACATGAAAAAAACGGAGGAGACGCACAAAACTGTT
TATCGTTCCAAGGATGACCATAGGAAAATTGGTAGCGGCATGTTTCAAGA
TAGTGCTGATTGGACCGCTCCGCGGACCCCGGCCCTGCCCGAAGTGACGC
CGTCTGCGCAAAAAGAGAACCTTTATGGACATAGAAATTTGAACACTCAG
ATGGTCGTGTTGTTGCGTGGAAATTATTATTTTAGGATGTAGGCTATCTA
TGATGCGCCAGCGTTCTGGTCACCACCGACGCCGCGGTTGCCTCGAGCCC
GCGTCCACCAATGACGTTGCATACTGTACTATTAATACTAATAATACTTC
TTGTGCAATGTTAAAAGTGTTTTTAGTGCAATAGATTTGGGACGTTCTTT
TCTGGAGCGAGTGTTTCAGTTGTGTGCCTCTTGCCCCCCAAAACCGACGG
ATTTCTTTTCATGAGCGTCTGGTGGTATAGTATGTATGTATGTATGTATG
TATGGTCATCACATATAACAGAGTATGGATCAACCGGGTAAGGTTGCCAA
TCCTGCTCGTGGTCAGCTGAACAGGGAAAATGAACATTCCCCTGTCCCCG
TGCGTGCCTGAGAATTTGGTCTCGCGAGACGGGTTCAGCCGTCCCGTCCC
GCGTCAGTCTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTAC
GGGATTCCTCCCGGGTTCCGCGGCGGCGTCCATATGAAACCGCCATACGC
CATCGGGTCAGTCCCGAGTTTATCGGGTCACTATAGCGAGCCGATAAGAT
ATCCGCTTGCCGTCCCCAAGAGCTCGATAAGATCAATAAAATATTAAATA
CACTGCAGTACAGTACAGTGGGTCGGACGGGTCGGAGAGAAGGTAAAAGG
GGAGAGAAAGTAAAAGGGTGGAAACGTCGCGCAATGGACTTTGTAACTGA
CGATTTCTTCAATAAGGTCTTGGGGTATGCTTTCGTAGAAAGTGTCGGTA
TGGCCATTTCCGTCCCTCCTCTATCTCTTTTAGACTCTAGTCAACAATAT
ACCGGGTATAATGTTGCTGTGGAATATATTGGAGCTATGCTTAGAACGTT
TTTTTTTTCTCCGATGACATTTCCGCCTTACAGTTACTAATAGCTGATTT
TACTCTACCTCGTTTTCCCTCTCTCTCCAACATTTTACATGGCAAAGCAA
GATGGGAAACTAATATTATAATATTCAATAGTAAAGGGCAATAGTATATA
ATACAGTATAAGTAGTAATAGTTGGTATCACTGTGGCGCCATCGCTTTAT
CCTTTAATAGGAGACATTTTTTTGTTTGCACTTGTAAAATAATGTTTACA
GTTCCAGTTACATTTACTGTGTTTGTTACAGTTAGTGAGGACTTGATCCC
CCCGGACGGTGTGGATGCTCAACTCTACAGTATACTCTACAATACAATAC
AGTACAGTATTAAGAATAGCAAGTTAAAGGGTGGGATGCGTCCAGATTTT
TCTATAAACATGTAAATTTGTTGGAAACTTCGAAGCTCGACGCCGATATC
TGTGAACAGAAGAACGTTGCCCCGATCCATCATTCATCCATTCATCTGTT
ATCCATCCGTTCATCCATTCCCGTTATTCATCCATTCATCTATTCCCGTT
ATTCATTCATTCATCCATTCCCGTTATTAATCCGTTCATCCATTCCCGTT
ATTCATCCATTCATCCATTCCCGTTATTCATCCATTCATCCGTTATTCAT
CCATTCATCCATTGCCGTTATTCATCCATTCATCCATTCCCGTTATTCAT
CCATTCATCCATTCCCGTTATTCATGCATTCATCCATTCCCGTTATTCAT
GCATTCATCCATTCCCGTTATTCATGCATTCATCCATTCCCGTTATTCAT
CCATTCATCCATTCCCGTTATTCATGCTTCATCCATTCATCGGTCATTCA
TCCGTTCATCCATTCATCCCTTCATCCCAGGGTATGCGTTACACCGACGG
GCTCCTGTTCGGCAGCGTCAGCAAGAGGCTGGGGACAGAGACGCATGACA
CCCACGAGCAGCGTTCGACCACACACCGGGAAGCCGGTAGGACTCGACTC
TAGGACCGAAGTGTTATCTTTTTAACACGTGTTGTGTTTTTCGGCGTGGA
TCTCCCGCTAGCGATGCTTCTGTTTTCCTGCAGTAGTACAGAAACATCAT
TGGTACTGTACACATGATCCCGACCTTGTGATATCATTGGCCCAAAATGA
TAATCGTTGCAACAGTTGCGCTTCTTTTTCTCTGACTTGACAATCTGAGA
TGAGAGTGTAATATTAATAGTGCATTGTAGTATTAAATAGTGTATTGTAC
TTAGGAGTATGGCGGGGAATCTACTACTATTTAATAGGCTCTATCTCCAT
CGCGTGGATTTTTGTTTTCCTGCTGGCTGTCGATGTACAATTTCATGTAC
TATACTGTAGTCAAGTAATGCACCAACGTCAGCCTCATGTCTCTTGAGGT
TCCCCTTTGGGTTTGGGCTATTAATACTATTTATACTAATATTAGTGATA
ATATTATTAATAGTAGGACTGATAGAGAAAGAGATGGAAGGTACAGTGTT
GACAAGGGAAGAAGAGATTATTTTGACAGCTTTTTCTTAGTGCAATATTT
TCGAAGAAACCAAATGAGCGTAGATTAGCGAGATTAGATTAGATTATATT
AAAGCAGATTTGACGCGGGGGGGCAAGCCTCGCATGTAGTCAACAAACTG
TCAACAAACTACATACCAGTAATTTGCCACGCCAAATAATTTCCAGTACT
ATAGCATCGCAGCTTGTGATGACGACAGGGTGAAAACAGGATGATGATAG
GGTTAAGGCAGGATGATGACAGGGTGAAGACAGGATGATGATAGGGTTAA
GGTAGGATATAGTTGGTACCGGTAGTTAGTGAAGAAAACATCCAAGTTTA
ACTTAAGGGACGTCCCCGCTCCCCGCCCACGCCTACGTCTACCTGCAGTA
CTCTCTGGTTACGTCCGCTCGCCAGACAGATGCGGGTTCTACGATGCCTT
CGGGTCGGTGGATGAGAAGCGATTGGCGAGGCTCATTCCTCCTGGCGAGG
TAGTACAGCGACAGCATGTTGCGCTCTCTTTGATTATTGTCTCACGACAA
GATCACAGTAGTCACGATACTGTAATCGCATTACTATAATCAAGATAATC
GTGATTCAGCCCGTGAAGCGTTTTGCTGCTACTCGTGAGCAGAGCACTTT
TTTATTTTACTTTATTTATCCACTGGACGATGTATGCCCTCAAGCACACA
TAATCATCGAAAGGGACACTGTAGGCTCTGTCTGGCACCTCAGGGGTTCG
CCGTAGCTATCAACAAAGCTCTGTCTTCCTATGGACTTGGGAAATATAAA
TCGGTACACCAGAGAAACGTCCAAGTCAGTGAGTTTTTTTTTTTGCAGTC
CAAACTAGAACAAATCGTGTCAGCTCACCTCTACTTGTGACCATCGTTAG
CCGAGAAACCCGCAACGTTACCTGCCTGTCCAAGGTGCTTACCCTGTCGA
ACGTTTTCGTCTCCCTTTGTCATTGCCCTCGTCATCACCAGCGACTCGCC
GGGTTCTTCGTTGTTCGAAAGGGGGGATCCACGCGACCATCGCTGAGAGA
AATGGAGGTAAGTCGCTAGATTCTGACCCTTAATAACAAGAGCTGTCGGC
ATGCGTTACAAAAAGCCCCTCGCAGAACCAGAGCTCAGCAAGTATCTCAA
ATATGGTTCTTCTGAGTGGAGGAGATAGGTTTGTTCGTGTTCTGGCTTGT
GCGGCGATCGCGCCCCCTGTAGTTTTAATTTACCTCGAGGACACAATATT
TCGAGGCCCAAAAAGCGTTTACTCGAAGCGATAGTGTAGTGTAACCACGT
AAGCACAAGCGCCAGGGCGCTTATTTTGTTTTGTTTATCCTTGACCTTTT
TCCAACTTGGATCTTTTGACTTCTTGCCCTTGGAGGATCGACCGCCTACG
CCAGTCTACCGATCCGGACCTGATCATGTTATGTTTACTTCGGCCTTACA
CCTCTCCCTCATCCCCTTCCTCTATCTCAAGAAAAAATGCCTTCCAGGCC
ACGAACCCCACGAAGGCCTTCACATATATATATGAATAGTAGACACTTTG
AACACCTTGTAAGGTTAGGGGGGAAGAAGAAAATCTTCGCTTTCCTGAAA
TATTTTGCCCAGCAAAAGGCGGCGTGTTGAAAATCGTCCAAAGGTTCCTG
CGAGTTGGTGCTTGGCCATCAGTAGACAGCATGTGTTCGTATCGCTTGAC
CATCAAACACCATGTCTTGGCAGATAATTAAAGTTGCACGCAGAGGAGAT
ATGGTTTTGGAAATTAGTAATTTTCACTCTCCGGCTGCTGGTTCGCCCAT
CCTGGAAGAAACGTTTACCAAGTTTATATTAATAGTCATTTGTGGTTGAA
AAAGAAGTATATACACTGCGGATGGTACTATTACTAAATGGTACTATTAT
TGCCATTAATACGCGCTCTCGTGTAAGAACCCAACCCTCAGCATCAAAAA
GGATGCCGATTGCTCCCCACGACCAACGCATCCTCTTCCTAAAGTTTTCG
GGGTAGAGGTTTATTGTTCAAGTAGAGCTATAATATGTCGATTACAGCAT
TAATATTTAACAGTGGTCGGGGGAGACGTTTGGCTCTTGTAATGAATAGC
AAATGCGTGGCGCGCGAAGTATACTGTGTAGTCTAGAAATAGTTGTAGCT
ATTTGCTTTGGTTTGCACTGGAAGCTTTAAACGTTGTCTGTTAACACCAC
ACGTATATGCGCAGAATATACTACTGGCGAGGGAAATGATCAAGACTAGG
GAAAATGAGCAAGACATAGAGAGATGATGTCAGGAAAAATGGGCAAAATG
AAAAATCCATGAAAACGGTCAATTTACTTATAAATACGAAGTATTTAATA
GTGGCGTGATCGACCCACCTCCTGAACCTGCGTTATTCACCCAACACAAG
CTAACTGACTCTTCCCTGTGATATAGGTATAGACTACCCGGTCTGTTTTA
CACAAGAATAAGACGAAACTTTTACCCGATTGCTAAAGGGTTAAGGGAGT
GATTGAAGAGACTTGGAACAAAGTACTTTATTCATACTACTATACTGTAC
CGGATATTAATACTAATACCATAGTACTTACCAGGTAACATTAACACTTA
TCGGTAACATTAACTTGGTCTCGGGGAACATTAAGGGGGGGGTCATGGAC
CGAGGAAGGATTCACTGGTTGACTGACGTCCGGCGGGGCTCTCTAGCGAT
CTATACCCCCCACGATCGATAGAGGGTAAAACAAGGACTAAATTATGCCA
AAAGCGCCCTTAGGTACCGGGCTTAGGTCATCCCCAGAGCTACGCCCGGT
TTAAAGGGGGTAAAACAAAGCAACTGTATCAAAGGATGGTAGGATGGTTT
AGGCTGATGGCTGATGGTGATGGTGATGGTGATGGTGATGGTGATGGTTG
ATGGCTGATGGCCGACGGCCGACGGCTGATGGCTGGGAACCGAAATTGGC
TGATGGCTGACGGCTTATGGCTGACGGCTGACGACTGATGGCTGGAAACC
GAAATTGGCTGATGGCTGATGGCTGATGGCTGATGGCTGATGGCCGACGG
CTGATGGCTGGGAACCGAAATTGGCTGATGGCTGACGGCTTATGGCTGAC
GGCTGACGGCTGATGGCTGGAAACCGAAATTGGCTGATGGCTGATGGCTG
ATGGTTGATGGCTGATGGCTGACGGCTGACGGCTGATGGCTGGAAACCGA
AATTGGGAATTGAGTCCGAATCCTAGCTGCAGTCACACGAACTGGGATTC
TAACTCATGCAATGCCCAACACGTGGAGAGCGGCTAATCTGTCGTGGGTA
CACAAAATTCGACCTCAACGTCGACGAGGGAAGGGAGGGCTGAACCCTTT
TCGCGATAAAAATTAATAATAGAAGGCATGTACCGCAGTGGGAAGGTTGT
GTGGCCTTTCTACTGTTGTGACCCCGGCTGGAGCGTCTTATCAATGTATC
GAAAGATATATTCTCACGCAAACAGTATAAGGGTGATGATGATGATGATG
ATGATGATGTATAGAGTTATGGCTGAACCACGACCCCGTACCCCAACAAC
GATCGCAACGTATCATTCATCCACGCCCTCTTGCAATGCCTTGAGGCCTT
ATTGCTGAACAGCACCTTAATACCTTAGTGCCCCTTTTCTTTCGTACTTA
AGAATGCCTAAGTGCCTTTATACCGTGGCCTGGGTGTCAGTTCGAGCCTT
CCTTCGCTTCTCTCCCATCTGGTTCCCATTGGCAACGGGAACACAAAAAT
CACGCAGATTTTTCGCAGCCTGGCGTCGTCGGCATTATCACAGGGGCAGC
CCCCCGTCCTGCTGATGGCTTGCCTAAGGCTAAGAGAAGGCGCCCCTACG
CAAATGTTCCAGTACCAATGCATGGCTGCGCAGGGTGGAAAGGAGGAACA
ACGGGGGGCTGGGAGGTGATGAACGATGCAACACAGCCGGGACGTGGGTC
TGAAGCCAGCCTTATCCTAGGACCCTTCCGTAGCTTTGAAAGCGTCGACC
TGCGCGTACCTTCGGCGACGGAGGTCGAACACCTTCTCCCTGTATACCTT
GAGCAGAGATCGCGAGTGCCGCGCTCTTTCCCGCCCCTTATTGCTTTTCA
TCCCGCCTGTCCCCGATCCTCGTTGCCGGTAGTTCCTCCCGAAGGCCCCG
AAAGGTGGAAGTCATGTCGTGTCGAATCAGTAACCTCACTATGGACTCCG
CGGCAGAGTACAGCGCAGTGCGACCTACTCCGCTAGGGCCTCTGGGCATG
GCAGGTCCTCAGCACTCTGTGTTAGAGGAGATGTTCGGTGCCGTACCGCC
GCCGCATGTGATCGAGGCGGAGGCATTACTAGACACGGGGATGCAGACTA
TGGAGGTGCGTCCGTGGCATCCATTTTATCACTGGCCACTGTAGACCAAT
GTTTTAGTTGTATTGGGTTTTCATCGCGAAGTGGGAGGTCATTTGATGCG
TTGTGGGTTCCACCAGTTGACCCCCCCCCCCTCCAATGAGCTTTGGCGAA
CTATTGTAATTTCCTTAGCCAGCAGATGGATCTGTTTATGCAGCTTCTAA
AGGACTGAATCATTTTCTTGCCTCCCGTCGCGTGGGGTACTGTACTGTAC
TGTACTCTACTCTACTGTGTATGCGTTACGTGTACAAGATACTTGCTAAT
GCATAAACCACGCCATAGCAGGATCCACCTCGTAAATTGAGACGTTTGGT
CGATTTTGGCTTGTGGTATCCCTATTTATACATGTTTATTTAATTTTTTA
AAATATATGCGCCACCGATGGCGCCCGTGCCCATGCATGTCTTTGCCCGT
TTATTTAATTTTTTAAAATATATGCGCCACCGATGGCGCCCGTGCCCATG
CATGTCTTTGCCCGAAACGAACGCCTCCATCCTCTTTGCCCGTTCATCCC
TCCTCTTCGTCTGTCGCTTGTTTTTCGGGTTTCTTGTCTTATGTATTTGC
CTGTTTTTTTCTTTCTAATTTGAACATGTGTGATGTGTGACACATGGTAG
GCGTTGGTGTCTGAACTGAAGGCTGTGGAGAACAACGTCGTTAGGCTTCA
GCTTGAAAATCGGTTGATGGAGCGTGTTATGAGCAGGCGAGACGCTTAGA
CCGACTCTGCTTTTGTGTACGTCCTGTCTGTTGTCCAATATTTCGCATGA
GGTACGAAGCTTCTGCTTTAGCAGTACATAGTTTCTTGTGTTACGTCGTC
ATGCGTTTGCCGTGTATCCGGTACAAAATATACGGTAGACCTGATAGTTG
TGAGGTTCCTTCTTGTCTGCATGGTGAAGGCGTTCTGGTCCCTCCGCGTG
TAATGTCTTTTTTGTAATGTTTTGAAGCATCATACCGAGTCCCAATG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig89:660713..675809+ >mRNA_A-nodosum_M_contig89.69.1 ID=mRNA_A-nodosum_M_contig89.69.1|Name=mRNA_A-nodosum_M_contig89.69.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=849bp|location=Sequence derived from alignment at A-nodosum_M_contig89:660713..675809+ (Ascophyllum nodosum dioecious)
ATGTACAACCTCGACGGAGTGGCGCTCTCGGGTTCGCTCCTTGCTTCATT
GTTCAATGAGGCAGCATCGCCTTATGCTGGTGCAGAAACACGATCGGGTA
TGCGTTACACCGACGGGCTCCTGTTCGGCAGCGTCAGCAAGAGGCTGGGG
ACAGAGACGCATGACACCCACGAGCAGCGTTCGACCACACACCGGGAAGC
CGTACTCTCTGGTTACGTCCGCTCGCCAGACAGATGCGGGTTCTACGATG
CCTTCGGGTCGGTGGATGAGAAGCGATTGGCGAGGCTCATTCCTCCTGGC
GAGCGACTCGCCGGGTTCTTCGTTGTTCGAAAGGGGGGATCCACGCGACC
ATCGCTGAGAGAAATGGAGATTTTTCGCAGCCTGGCGTCGTCGGCATTAT
CACAGGGGCAGCCCCCCGTCCTGCTGATGGCTTGCCTAAGGCTAAGAGAA
GGCGCCCCTACGCAAATGTTCCAGTACCAATGCATGGCTGCGCAGGGTGG
AAAGGAGGAACAACGGGGGGCTGGGAGTTCCTCCCGAAGGCCCCGAAAGG
TGGAAGTCATGTCGTGTCGAATCAGTAACCTCACTATGGACTCCGCGGCA
GAGTACAGCGCAGTGCGACCTACTCCGCTAGGGCCTCTGGGCATGGCAGG
TCCTCAGCACTCTGTGTTAGAGGAGATGTTCGGTGCCGTACCGCCGCCGC
ATGTGATCGAGGCGGAGGCATTACTAGACACGGGGATGCAGACTATGGAG
GCGTTGGTGTCTGAACTGAAGGCTGTGGAGAACAACGTCGTTAGGCTTCA
GCTTGAAAATCGGTTGATGGAGCGTGTTATGAGCAGGCGAGACGCTTAG back to top
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