prot_A-nodosum_M_contig89.45.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig89.45.2
Unique Nameprot_A-nodosum_M_contig89.45.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length315
Homology
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BLAST of mRNA_A-nodosum_M_contig89.45.2 vs. uniprot
Match: D8LB45_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB45_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 7.910e-60
Identity = 103/145 (71.03%), Postives = 119/145 (82.07%), Query Frame = 0 
Query:  169 LEAEVASFAFSPAMTVKKFKTLQDRRVPVNIKYSGGGGFKRFFEEVTKVLKERFPDVLISREVVEVKSSRGEQVFEIRIDGKLVCAKRRGKAGVFLRMETVEQAVKKARRRQRPGAIVYGDHETYRNARSLDDSTPCEGPPLEED 313
            LEA VA+F F+P MTV+KFKT+QDRRVPV+IKYSGGGGFKR+FEE+  VLK  FPDVLI RE+VEV S+R E+VFEIRIDGKLVCAKRRGK GVFL MET  QA++KAR+R+RPGAIVYGD ETY N ++L D     G  LE D
Sbjct:  153 LEARVANFEFAPPMTVRKFKTMQDRRVPVSIKYSGGGGFKRYFEEIAIVLKRHFPDVLIDREIVEVSSTREEEVFEIRIDGKLVCAKRRGKPGVFLHMETFAQAIRKARQRRRPGAIVYGDQETYMNVKALTDQRTA-GDSLERD 296
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BLAST of mRNA_A-nodosum_M_contig89.45.2 vs. uniprot
Match: A0A7R9YEK5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEK5_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 6.360e-14
Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 0 
Query:  231 VVEVKSSRGEQVFEIRIDGKLVCAKRRGKAGVFLRMETVEQAVKKARRRQRPGAIVYGDHETY 293
            ++EV+S R E  FEI +DGKLV AKR+ K GV+L+M T+ QA+ +ARRR+RP ++VYGD  TY
Sbjct:    3 ILEVRSPRDEDQFEIIVDGKLVYAKRKDKPGVYLQMRTISQAISRARRRRRPNSVVYGDPSTY 65
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig89.45.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB45_ECTSI7.910e-6071.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9YEK5_9STRA6.360e-1457.14Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 194..281
e-value: 1.3E-6
score: 30.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig89contigA-nodosum_M_contig89:347136..357701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig89.45.2mRNA_A-nodosum_M_contig89.45.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig89 347065..358527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig89.45.2 ID=prot_A-nodosum_M_contig89.45.2|Name=mRNA_A-nodosum_M_contig89.45.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=315bp
MSDNTLIRYMKNCKISHPVIVSLLIFPEVLSSAVRIPWREATFAFVPPPP
LPALDPISGIDDSCSLGKTQHRRPCFPLRGSRGVGWTALGKRWDRSYLGD
FERDEDFTLSRFGGDVRCIVKNAAVSGCTHGDNGDDDAIAAAAAPAENVG
DTENVQDLSRAASMPAPELEAEVASFAFSPAMTVKKFKTLQDRRVPVNIK
YSGGGGFKRFFEEVTKVLKERFPDVLISREVVEVKSSRGEQVFEIRIDGK
LVCAKRRGKAGVFLRMETVEQAVKKARRRQRPGAIVYGDHETYRNARSLD
DSTPCEGPPLEEDA*
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