prot_A-nodosum_M_contig89.44.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig89.44.1
Unique Nameprot_A-nodosum_M_contig89.44.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length209
Homology
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BLAST of mRNA_A-nodosum_M_contig89.44.1 vs. uniprot
Match: D8LB46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB46_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 2.390e-53
Identity = 90/150 (60.00%), Postives = 115/150 (76.67%), Query Frame = 0 
Query:   59 DLAEVLDREKELEELFTDDWSDMPANNGMVKTKVPLPDISTFKSANRASPSPSMAQKEKETT-GPIIGSGNGDDSDGDVVPGS-ISSFKSKLPPIVDREEERRVLSAAERFDEGPVVKGLKTATWFSICALVAWEVYINSPLFNTPASPP 206
            +L +VL+ ++ +E LF+DDWS MPAN GM K+ VPLPDIS FK + RA  +  + Q+EK++  G ++G G+G D DGD VP S ++ F+SKL PIVDREEE R  +AAERF+EGP+V+GLKTATWFSIC LV WEVYINSP F+ P SPP
Sbjct:   59 ELGDVLEGDRSVEALFSDDWSGMPANTGMTKSNVPLPDISEFKPSRRAEST--LEQREKKSAVGLVVGPGDGSDDDGDAVPASRLAGFESKLTPIVDREEEWRKKNAAERFEEGPIVRGLKTATWFSICTLVLWEVYINSPWFHAPESPP 206
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BLAST of mRNA_A-nodosum_M_contig89.44.1 vs. uniprot
Match: A0A6H5KY95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY95_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.430e-51
Identity = 90/150 (60.00%), Postives = 116/150 (77.33%), Query Frame = 0 
Query:   59 DLAEVLDREKELEELFTDDWSDMPANNGMVKTKVPLPDISTFKSANRASPSPSMAQKEKETT-GPIIGSGNGDDSDGDVVPGS-ISSFKSKLPPIVDREEERRVLSAAERFDEGPVVKGLKTATWFSICALVAWEVYINSPLFNTPASPP 206
            +L +VL+ ++ +E LFTDDWS MPAN GM K+ VPLPDIS FK + RA  +  + Q+EK++  G ++G+G+GDD D   VP S ++ F+SKL PIVDREEERR  +AAERF+EGP+V+GLKTATWFSIC LV WE+YINSP F+ P SPP
Sbjct:  154 ELGDVLEGDRSVEALFTDDWSGMPANTGMTKSNVPLPDISEFKPSRRAEST--LEQREKKSAVGLVVGAGDGDDDD--AVPASRLAGFESKLTPIVDREEERRQKNAAERFEEGPIVRGLKTATWFSICTLVLWEIYINSPWFHAPESPP 299
[Close]
BLAST of mRNA_A-nodosum_M_contig89.44.1 vs. uniprot
Match: A0A835YVC2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC2_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 8.180e-14
Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0 
Query:  133 DGDVVPGSISSFKSKLPPIVDREEERRVLSAAERFDEGPVVKGLKTATWFSICALVAWEVYINSPLFNTP 202
            DG      +  F+S+L PI   + E R L+AAERF EG VVK +K ATWF++ +LVAWE+Y++SP F  P
Sbjct:  106 DGKTELPDLKKFESQLTPISGMKPEVRELTAAERFQEGNVVKAIKAATWFALLSLVAWEIYLHSPFFKPP 175
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig89.44.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LB46_ECTSI2.390e-5360.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KY95_9PHAE1.430e-5160.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YVC2_9STRA8.180e-1450.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig89contigA-nodosum_M_contig89:333347..346355 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig89.44.1mRNA_A-nodosum_M_contig89.44.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig89 332561..346420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig89.44.1 ID=prot_A-nodosum_M_contig89.44.1|Name=mRNA_A-nodosum_M_contig89.44.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=209bp
MAAGATGGKKRKRRKKEPNPSVRSKSSSPSEALVPGVLQDDDFVAGKDGE
EPEYQSARDLAEVLDREKELEELFTDDWSDMPANNGMVKTKVPLPDISTF
KSANRASPSPSMAQKEKETTGPIIGSGNGDDSDGDVVPGSISSFKSKLPP
IVDREEERRVLSAAERFDEGPVVKGLKTATWFSICALVAWEVYINSPLFN
TPASPPIT*
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