prot_A-nodosum_M_contig89.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig89.2.1
Unique Nameprot_A-nodosum_M_contig89.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length145
Homology
BLAST of mRNA_A-nodosum_M_contig89.2.1 vs. uniprot
Match: A0A6H5KPL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPL1_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 7.520e-9
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0
Query:   98 SDSSDD-PEVRRSVITGKRIMMNLD-RTNEDHARERGRKQLLQFMNSQF 144
            SD+SDD P VRRS ITGK+I M L+ +T EDHAR  GRK LLQFMNSQF
Sbjct:  128 SDTSDDEPGVRRSAITGKKIRMKLENQTTEDHARAAGRKHLLQFMNSQF 176          
BLAST of mRNA_A-nodosum_M_contig89.2.1 vs. uniprot
Match: A0A6S9KA90_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KA90_HETAK)

HSP 1 Score: 59.7 bits (143), Expect = 1.580e-8
Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  101 SDDPEVRRSVITGKRIMMNLDRTNEDHARERGRKQLLQFMNSQF 144
            SDDP+VRRS I+GK+I M LDR ++D ARERGR+ LL FMN+ +
Sbjct:  100 SDDPDVRRSAISGKKIKMKLDRDDDDLARERGRRHLLHFMNASY 143          
BLAST of mRNA_A-nodosum_M_contig89.2.1 vs. uniprot
Match: A0A835ZG69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG69_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.270e-7
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   93 EGDSDSDSSDDPEVRRSVITGKRIMMNLDRTNEDHARERGRKQLLQFMNSQF 144
            +G  DSD  D P V+RSVITG+ I M +D+T +D ARERGR +LL FMNSQ+
Sbjct:  131 KGGDDSDG-DAPGVKRSVITGEVIKMKIDKTADDRARERGRAELLAFMNSQY 181          
BLAST of mRNA_A-nodosum_M_contig89.2.1 vs. uniprot
Match: K0S0A4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S0A4_THAOC)

HSP 1 Score: 54.3 bits (129), Expect = 2.020e-6
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0
Query:  100 SSDDPEVRRSVITGKRIMMNLDRTNEDHARERGRKQLLQFMNS 142
            S D P VRRSVITGK+I M++++  +D ARER RK LL+FMNS
Sbjct:  107 SDDGPNVRRSVITGKKIKMHIEKDADDIARERARKDLLKFMNS 149          
BLAST of mRNA_A-nodosum_M_contig89.2.1 vs. uniprot
Match: A0A7S2LUK6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LUK6_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 5.080e-5
Identity = 23/38 (60.53%), Postives = 34/38 (89.47%), Query Frame = 0
Query:  105 EVRRSVITGKRIMMNLDRTNEDHARERGRKQLLQFMNS 142
            EVRRSVITGK+I M++D+ ++D ARE+ RK+LL++MN+
Sbjct:  128 EVRRSVITGKKIKMHIDKDSDDIAREKARKELLRYMNA 165          
BLAST of mRNA_A-nodosum_M_contig89.2.1 vs. uniprot
Match: A0A7S3QJZ6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJZ6_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 9.990e-5
Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 0
Query:  104 PEVRRSVITGKRIMMNLDRTNEDHARERGRKQLLQFMNS 142
            P VRRSVITG +I M++D+T +D  RE+ RK LL+FMNS
Sbjct:  199 PNVRRSVITGHKIKMHIDKTEDDIIREKARKDLLKFMNS 237          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig89.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KPL1_9PHAE7.520e-971.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6S9KA90_HETAK1.580e-863.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZG69_9STRA2.270e-759.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0S0A4_THAOC2.020e-662.79Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2LUK6_9STRA5.080e-560.53Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3QJZ6_9STRA9.990e-561.54Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig89contigA-nodosum_M_contig89:17700..18460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig89.2.1mRNA_A-nodosum_M_contig89.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig89 17700..18460 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig89.2.1 ID=prot_A-nodosum_M_contig89.2.1|Name=mRNA_A-nodosum_M_contig89.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=145bp
GRSDPLPSSGGSSSSSDVDESERGRGRRRNRSESTERKKKKKRKKRAASE
LAMRKDKRRRHKKHDKKREKKRDKKKKEKRSKLSKREKHEKVEGDSDSDS
SDDPEVRRSVITGKRIMMNLDRTNEDHARERGRKQLLQFMNSQF*
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