prot_A-nodosum_M_contig8894.1.6 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8894.1.6
Unique Nameprot_A-nodosum_M_contig8894.1.6
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length306
Homology
BLAST of mRNA_A-nodosum_M_contig8894.1.6 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 6.470e-21
Identity = 58/103 (56.31%), Postives = 67/103 (65.05%), Query Frame = 0
Query:    3 GKNEEAKPLYKRSLAIDEKIYGSYHPEIATDLNNWARLLK----TLPYTNAL---------LLSQGKYAEAEPLYERSQTIQEKALGPEHHAVAVVLNNRAGL 92
            GK +EA+PLYKRSLAIDEK+YG  HP++AT LNNW RLL      L Y  AL         L+ QGKY +A PLY+RS  I EK  GP+H  VA  LNNRA L
Sbjct:  352 GKYDEAEPLYKRSLAIDEKVYGPDHPDVATALNNWVRLLSICSSALKYLLALTTLLPVVPFLIFQGKYDQAGPLYDRSLAILEKVHGPDHPDVAQSLNNRAEL 454          
BLAST of mRNA_A-nodosum_M_contig8894.1.6 vs. uniprot
Match: D7G180_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G180_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 7.220e-21
Identity = 58/113 (51.33%), Postives = 71/113 (62.83%), Query Frame = 0
Query:    1 SWGKNEEAKPLYKRSLAIDEKIYGSYHPEIATDLNNWARLLKTL----------------PYTNALLL-----SQGKYAEAEPLYERSQTIQEKALGPEHHAVAVVLNNRAGL 92
            S GK+EEA+PLY+RSLAIDE++YG  HPE+ATDLNN A LL+T                 P T+ L L     +QGKY EAEPL+ RS  I E+  GP+H  VA  L+N AGL
Sbjct:   80 SQGKHEEAEPLYRRSLAIDEEVYGPDHPEVATDLNNLAGLLETQIMTSVVRQSHSVNSHEPSTDVLGLRQPDVAQGKYEEAEPLHRRSLAIDEEVYGPDHPNVATGLSNLAGL 192          
BLAST of mRNA_A-nodosum_M_contig8894.1.6 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.060e-15
Identity = 49/95 (51.58%), Postives = 61/95 (64.21%), Query Frame = 0
Query:    3 GKNEEAKPLYKRSLAIDEKIYGSYHPEIATDLNNWARLLKTLPYT-----NALLLSQGKYAEAEPLYERSQTIQEKALGPEHHAVAVVLNNRAGL 92
            GK  EA+ LYKRSL+IDEK+YG  HPE+A DLNN A L+++           L  + GK  EA PL+ +S  I+EK LGPEH  VA  LNN AG+
Sbjct:    7 GKFHEAESLYKRSLSIDEKVYGPDHPEVAADLNNMAVLMESQARRWGSSDKFLGSTSGKCVEAVPLHRQSLGIREKTLGPEHPDVAESLNNLAGV 101          
BLAST of mRNA_A-nodosum_M_contig8894.1.6 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 9.390e-15
Identity = 57/156 (36.54%), Postives = 66/156 (42.31%), Query Frame = 0
Query:    3 GKNEEAKPLYKRSLAIDEKIYGSYHPEIATDLNNWARLLKT------------------------------------------------------------------LPYTNALLLSQGKYAEAEPLYERSQTIQEKALGPEHHAVAVVLNNRAGL 92
            GK EEA+PLY  SLAIDEK+YG  H E+A DLNN A LL                                                                      + N   + QG YAEA+PLYERSQ I++K LGP+H  VA VLNNRAGL
Sbjct:   88 GKYEEAEPLYMLSLAIDEKVYGPDHLEVAEDLNNCAGLLSIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQALNKRVGVEGKCLCLFATSYRPHFVWLNYEYICQGNYAEAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGL 243          
BLAST of mRNA_A-nodosum_M_contig8894.1.6 vs. uniprot
Match: A0A6H5KU99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU99_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 8.320e-14
Identity = 48/109 (44.04%), Postives = 64/109 (58.72%), Query Frame = 0
Query:    1 SWGKNEEAKPLYKRSLAIDEKIYGSYHPEIATDLNNWARLLKT-------LPYTNALLL----------SQGKYAEAEPLYERSQTIQEKALGPEHHAVAVVLNNRAGL 92
            S GK  EAK  Y+RSLAID+++YG+ HP++AT LNN A LL+T       +P    +L             G++A A  LYE S  I++  LGP+H  VA  LNNRAG+
Sbjct:  468 SQGKYSEAKTFYERSLAIDKRVYGADHPQVATTLNNLAGLLETQVGHTFQMPSALEMLTVNSSMATTFKCSGEFAAALSLYETSHAIRKATLGPDHPDVAQSLNNRAGI 576          
BLAST of mRNA_A-nodosum_M_contig8894.1.6 vs. uniprot
Match: A0A6H5JUC1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC1_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 8.380e-13
Identity = 44/90 (48.89%), Postives = 57/90 (63.33%), Query Frame = 0
Query:   16 LAIDEKIYGSYHPEIATDLNNWARLLK----TLPYTNALLLS---------QGKYAEAEPLYERSQTIQEKALGPEHHAVAVVLNNRAGL 92
            +AI EK+ G  HP++A  LNN A LL+    T+P+T   L           QGKY+EAEPLY+R Q ++ KALGPEH ++A  LNNRA L
Sbjct:  135 MAIREKVLGPEHPDVAASLNNRAGLLRKCFSTIPFTIFTLKHDSSRYPHCIQGKYSEAEPLYDRCQAMKGKALGPEHPSLAATLNNRAEL 224          
BLAST of mRNA_A-nodosum_M_contig8894.1.6 vs. uniprot
Match: A0A6H5JIH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH9_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 2.080e-12
Identity = 45/106 (42.45%), Postives = 57/106 (53.77%), Query Frame = 0
Query:    3 GKNEEAKPLYKRSLAIDEKIYGSYHPE-------------------IATDLNNWARLLKTLPYTNALLLSQGKYAEAEPLYERSQTIQEKALGPEHHAVAVVLNNR 89
            GK+ EA+PLY+RS AI EK+ G   P+                   +A D ++     + LP+ +     QGKYAE EPLYE+SQ I EK LGPEH  VA VL  R
Sbjct:  858 GKDAEAEPLYERSQAIQEKVLGPEQPDLRRRSTNGRCCWLISTLSVVAYDRSSSGSASRYLPWLSVRTACQGKYAEPEPLYEQSQAITEKVLGPEHPDVATVLKKR 963          
BLAST of mRNA_A-nodosum_M_contig8894.1.6 vs. uniprot
Match: A0A6H5KB97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB97_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.540e-10
Identity = 47/91 (51.65%), Postives = 53/91 (58.24%), Query Frame = 0
Query:    3 GKNEEAKPLYKRSLAIDEKIYGSYHPEIATDLNNWARLLKTLPYTNALLLS-QGKYAEAEPLYERSQTIQEKALGPEHHAVAVVLNNRAGL 92
            GK E A  LY+ +  I + +  S HPE A  LN  A  L+      A LL  QGKYAEAEPLYERSQ I+E  LGPEH  V   LNN A L
Sbjct:  293 GKYENADDLYREATEIGKTLV-SGHPEHALWLNYQALSLQKQVNNKAHLLEVQGKYAEAEPLYERSQAIRENVLGPEHSDVGRSLNNLAAL 382          
BLAST of mRNA_A-nodosum_M_contig8894.1.6 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 3.890e-10
Identity = 49/130 (37.69%), Postives = 58/130 (44.62%), Query Frame = 0
Query:    3 GKNEEAKPLYKRSLAIDEKIYGSYHPEIATDLNNWARLLKTL----PYTNAL------------------------------------LLSQGKYAEAEPLYERSQTIQEKALGPEHHAVAVVLNNRAGL 92
            G   EA P   R++ I EK+ G  HP++A  LNN A LL+      P T  L                                      SQGK+AEAEPLY R+  I E ALGPEH  +A  LNNRAGL
Sbjct:  644 GNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLRAQLLNNPRTGLLKAQGGVVESAGQGVVEQLFARCQSPLALTTLLTYLPFTSQGKFAEAEPLYRRATEIWETALGPEHPQMATALNNRAGL 773          
BLAST of mRNA_A-nodosum_M_contig8894.1.6 vs. uniprot
Match: D7FWM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWM6_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.430e-9
Identity = 38/80 (47.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query:   18 IDEKIYGSYHPEIATDLNNWARLLKTLPYTNALLL--------SQGKYAEAEPLYERSQTIQEKALGPEHHAVAVVLNNR 89
            + EK+ G  HP++AT L   A LL    +    +L        SQGKY EAEPLY+RSQ   EK LGPEH  VA VL N+
Sbjct:    1 MPEKVLGPEHPDVATVLEIRALLLPNQVWLGLNVLAMACSTTESQGKYEEAEPLYDRSQATPEKVLGPEHPDVATVLKNK 80          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8894.1.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIY6_9PHAE6.470e-2156.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G180_ECTSI7.220e-2151.33TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LI51_9PHAE1.060e-1551.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5H9_9PHAE9.390e-1536.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KU99_9PHAE8.320e-1444.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUC1_9PHAE8.380e-1348.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JIH9_9PHAE2.080e-1242.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB97_9PHAE1.540e-1051.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJK0_9PHAE3.890e-1037.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWM6_ECTSI1.430e-947.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 205..222
score: 43.33
coord: 283..304
score: 33.64
coord: 249..269
score: 49.52
coord: 140..158
score: 45.26
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 167..200
e-value: 0.037
score: 23.2
coord: 83..116
e-value: 0.57
score: 19.2
coord: 209..242
e-value: 0.19
score: 20.9
coord: 125..158
e-value: 1.6
score: 17.8
coord: 251..284
e-value: 0.063
score: 22.4
NoneNo IPR availablePFAMPF13374TPR_10coord: 50..80
e-value: 4.2E-5
score: 23.3
coord: 168..207
e-value: 7.0E-8
score: 32.1
NoneNo IPR availablePFAMPF13424TPR_12coord: 208..281
e-value: 1.8E-19
score: 69.8
coord: 82..157
e-value: 4.9E-19
score: 68.4
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 50..167
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 50..167
coord: 235..298
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 152..248
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 3..43
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 3..43
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 235..298
coord: 152..248
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..177
e-value: 4.5E-54
score: 184.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 178..304
e-value: 3.3E-45
score: 156.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 161..298
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 6..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8894contigA-nodosum_M_contig8894:8274..11251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8894.1.6mRNA_A-nodosum_M_contig8894.1.6Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8894 8274..12202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8894.1.6 ID=prot_A-nodosum_M_contig8894.1.6|Name=mRNA_A-nodosum_M_contig8894.1.6|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=306bp
SWGKNEEAKPLYKRSLAIDEKIYGSYHPEIATDLNNWARLLKTLPYTNAL
LLSQGKYAEAEPLYERSQTIQEKALGPEHHAVAVVLNNRAGLLQSQGKYT
EAEPLYERSQAIREKALGPEHPAVAVVLNNRAGLLKSQGKYEEVEPLYKR
SLDIVEKTYGPDHPKIAIVLNNWAGLLKSQGKYEEAKPLYKRSLDIDEKT
YGPDHPEIAIVLNNWAELLKSQGKYAEADPLYLRAIEIEEKALGTEHPGL
ATTLNNRALLLDKQEKYAEAIPLLERALSIRMKLGGNHPDTVSTQNSLEI
VRKKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf