prot_A-nodosum_M_contig8856.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8856.3.1
Unique Nameprot_A-nodosum_M_contig8856.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length104
Homology
BLAST of mRNA_A-nodosum_M_contig8856.3.1 vs. uniprot
Match: D7G6K9_ECTSI (Chaperonin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K9_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 6.230e-49
Identity = 81/91 (89.01%), Postives = 86/91 (94.51%), Query Frame = 0
Query:    1 MSSLAITLDDEVIDKPLQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVR 91
            MSSL ITL+D+VIDKPLQPV NYILVKMF A+SRTAGGIVLPDEAQDVPCEG VVA GPGRTHPLTGTLIPMCVSEGDTVLFSR+SGRKV+
Sbjct:   61 MSSLVITLEDDVIDKPLQPVGNYILVKMFAAVSRTAGGIVLPDEAQDVPCEGLVVAHGPGRTHPLTGTLIPMCVSEGDTVLFSRWSGRKVK 151          
BLAST of mRNA_A-nodosum_M_contig8856.3.1 vs. uniprot
Match: A0A835YHA6_9STRA (Chaperonin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHA6_9STRA)

HSP 1 Score: 114 bits (284), Expect = 5.680e-29
Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 0
Query:    1 MSSLAITLDDEVIDKPLQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVREENI 95
            M+ L  TLDD+VI  PLQPVSN+ILVK+  + S T GGIVLPD++ D P EG VVA GPGR+HP T  LIPMCV+ G  V++S++SG+KV+ + +
Sbjct:   49 MAELVHTLDDKVIRGPLQPVSNFILVKIRDSASLTTGGIVLPDQSIDKPSEGEVVATGPGRSHPHTAELIPMCVAPGQRVMYSKYSGKKVKYDGL 143          
BLAST of mRNA_A-nodosum_M_contig8856.3.1 vs. uniprot
Match: F0Y075_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y075_AURAN)

HSP 1 Score: 91.7 bits (226), Expect = 4.000e-22
Identity = 44/85 (51.76%), Postives = 63/85 (74.12%), Query Frame = 0
Query:   17 LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVR---EENIVVK 98
            L PV NY LVK+      T GG++LPD+A++ P EGSVVAAGPGR+HP TGTLI M V+EG++VL+ +F G  V+   E++++++
Sbjct:    2 LSPVGNYALVKITEGKDATKGGVLLPDQAKEKPSEGSVVAAGPGRSHPDTGTLIAMPVAEGESVLYGKFDGTPVKYCGEDHMLIR 86          
BLAST of mRNA_A-nodosum_M_contig8856.3.1 vs. uniprot
Match: A0A8J2WID0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WID0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.950e-21
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    7 TLDDEVIDKPLQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVR 91
            TLDD  I  PL+PV+NYILVK+   I  T GG+ LPD+A++ P  G VVAAG G+ HP TG ++P  V+EGD VL+ +F G  V+
Sbjct:   32 TLDDAPIGGPLEPVANYILVKIDDGIDATKGGVFLPDQAKEKPSAGIVVAAGAGKAHPDTGVVVPNPVTEGDRVLYGKFDGTSVK 116          
BLAST of mRNA_A-nodosum_M_contig8856.3.1 vs. uniprot
Match: A0A7R9UAA2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAA2_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 5.940e-19
Identity = 41/94 (43.62%), Postives = 65/94 (69.15%), Query Frame = 0
Query:    8 LDDEVIDKPLQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVR---EENIVVK 98
            LD   I   LQPVSN++LVK+  A+++TAGGI++P+ A+  P +G  VA GPGR HP TG L+P+ V  G+ V++  + G K++   E++++V+
Sbjct:   33 LDGRPITSDLQPVSNFVLVKLRDAMAQTAGGIIMPETAKKRPNDGLAVAVGPGRYHPETGKLMPVSVKAGERVMYGEYMGTKIKYNEEDHVLVR 126          
BLAST of mRNA_A-nodosum_M_contig8856.3.1 vs. uniprot
Match: A0A8J6CGT7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CGT7_DIALT)

HSP 1 Score: 84.3 bits (207), Expect = 1.160e-17
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    7 TLDDEVIDKPLQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVR 91
            TLD+ V+D PLQP+ + +LVK+  A  +T GG+ L  E  D P  G+VVAAGPG+ HP T  +I   +  GDT+LF  ++G KV+
Sbjct:   50 TLDNMVLDGPLQPLKDQVLVKLAGAEKQTKGGLFLTGEMTDKPTRGTVVAAGPGKPHPYTDVMITNPIKAGDTILFGSYTGTKVK 134          
BLAST of mRNA_A-nodosum_M_contig8856.3.1 vs. uniprot
Match: A0A7S2XTD7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTD7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 8.130e-17
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    7 TLDDEVIDKPLQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSG 87
            TLD E I  P+ P+ N++LV+    +S T GGI+LPD+AQ+ P EG V+AAGPG  HP TG LI   V +G  VL+ ++ G
Sbjct:   57 TLDGETIRGPIAPLGNFVLVRTKDMLSSTEGGILLPDQAQERPTEGEVMAAGPGNIHPDTGILIDNPVIKGMNVLYGKYDG 137          
BLAST of mRNA_A-nodosum_M_contig8856.3.1 vs. uniprot
Match: A0A7S2E919_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E919_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.420e-16
Identity = 38/82 (46.34%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    6 ITLDDEVIDKPLQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSG 87
            +TL+ E I   + P+ N++LV+   ++S T GGI+LPD++++ P EG VVAAGPG+ HP TGT I   V+ G  VL+ +F+G
Sbjct:   66 VTLEGEKIRGEITPLGNFVLVRQKDSLSATGGGILLPDQSKERPTEGEVVAAGPGKLHPHTGTRITNPVTAGVNVLYGKFAG 147          
BLAST of mRNA_A-nodosum_M_contig8856.3.1 vs. uniprot
Match: A0A2M7I0G4_9BACT (Co-chaperonin GroES n=1 Tax=Ignavibacteriales bacterium CG12_big_fil_rev_8_21_14_0_65_30_8 TaxID=1974046 RepID=A0A2M7I0G4_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 3.980e-16
Identity = 36/77 (46.75%), Postives = 55/77 (71.43%), Query Frame = 0
Query:   17 LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVREE 93
            L+P+++ ++VK   A  +T GGI+LPD A++ P EG++VAAGPGRT    G ++PM V +GD VL+ ++SG +V  E
Sbjct:    6 LKPLADRVIVKPMEADEKTKGGIILPDTAKEKPVEGTIVAAGPGRTSD-EGKVVPMSVKKGDKVLYGKYSGSEVTVE 81          
BLAST of mRNA_A-nodosum_M_contig8856.3.1 vs. uniprot
Match: A0A2E5GEI2_9BACT (Co-chaperonin GroES n=2 Tax=root TaxID=1 RepID=A0A2E5GEI2_9BACT)

HSP 1 Score: 75.9 bits (185), Expect = 7.590e-16
Identity = 36/77 (46.75%), Postives = 56/77 (72.73%), Query Frame = 0
Query:   17 LQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPCEGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVREE 93
            L+P+++ ++V+  PA  ++AGGI+LPD AQ+ P +GSVVA GPG++  + G LI M V EGD VL+ ++SG ++  E
Sbjct:    5 LKPLADRVVVEPAPAEDKSAGGIILPDTAQEKPQQGSVVAVGPGKSSDV-GNLIEMTVKEGDKVLYGKYSGSEITHE 80          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8856.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6K9_ECTSI6.230e-4989.01Chaperonin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
A0A835YHA6_9STRA5.680e-2957.89Chaperonin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
F0Y075_AURAN4.000e-2251.76Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A8J2WID0_9STRA1.950e-2152.94Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9UAA2_9STRA5.940e-1943.62Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A8J6CGT7_DIALT1.160e-1747.06Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S2XTD7_9STRA8.130e-1749.38Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2E919_9STRA2.420e-1646.34Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A2M7I0G4_9BACT3.980e-1646.75Co-chaperonin GroES n=1 Tax=Ignavibacteriales bact... [more]
A0A2E5GEI2_9BACT7.590e-1646.75Co-chaperonin GroES n=2 Tax=root TaxID=1 RepID=A0A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 17..32
score: 22.27
coord: 75..87
score: 45.35
coord: 39..60
score: 46.92
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 16..99
e-value: 1.6E-12
score: 57.6
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 17..93
e-value: 2.5E-17
score: 62.7
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 15..91
IPR020818GroES chaperonin familyCDDcd00320cpn10coord: 16..98
e-value: 5.2485E-21
score: 77.9327
IPR037124GroES chaperonin superfamilyGENE3D2.30.33.40GroES chaperonincoord: 13..101
e-value: 2.7E-20
score: 74.3
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 15..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8856contigA-nodosum_M_contig8856:6622..7584 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8856.3.1mRNA_A-nodosum_M_contig8856.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8856 6622..7593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8856.3.1 ID=prot_A-nodosum_M_contig8856.3.1|Name=mRNA_A-nodosum_M_contig8856.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=104bp
MSSLAITLDDEVIDKPLQPVSNYILVKMFPAISRTAGGIVLPDEAQDVPC
EGSVVAAGPGRTHPLTGTLIPMCVSEGDTVLFSRFSGRKVREENIVVKAL
SLTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020818Chaperonin_GroES
IPR037124Chaperonin_GroES_sf
IPR011032GroES-like_sf