prot_A-nodosum_M_contig884.17.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig884.17.1
Unique Nameprot_A-nodosum_M_contig884.17.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length261
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig884.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 12..203
e-value: 1.4E-8
score: 36.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 28..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..224
NoneNo IPR availableCDDcd00267ABC_ATPasecoord: 150..195
e-value: 3.41762E-4
score: 37.9947

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig884contigA-nodosum_M_contig884:283427..284672 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig884.17.1mRNA_A-nodosum_M_contig884.17.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig884 283385..285263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig884.17.1 ID=prot_A-nodosum_M_contig884.17.1|Name=mRNA_A-nodosum_M_contig884.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=261bp
MFASSTIDGVGQPKAVQRAIPGATPPRGVAYIDRHSIQKIAKTEAFTVAE
VLSTAFDSHCHNPSQQYPSPEGLQGAQHSSAELLLSAAGLRGVRDRPCRD
LSRGQLLCLVLCIGVAHALAERETSGSLWRFGELAAREECVECEGGDVPA
PVLCLDEFLEVEDARVRRGVENACARLNSLGVTIVFATHVMDHVEGMLTS
TAGWPSDKASHTRSGSNSGGGGRVVTFTEARANEPCRLEACAYVEWKRSE
DADRQARRLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase