prot_A-nodosum_M_contig883.30.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig883.30.1
Unique Nameprot_A-nodosum_M_contig883.30.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length799
Homology
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BLAST of mRNA_A-nodosum_M_contig883.30.1 vs. uniprot
Match: A0A6H5L3H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H2_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.480e-47
Identity = 89/134 (66.42%), Postives = 104/134 (77.61%), Query Frame = 0 
Query:  395 QELPGCPYPGHANVSWVCWGCDGARHHLKTRAAMEPLKRTHGFKVHRVPNDGDCFYSSIKAAVEPESPGKNKKGAGAVPARG--VTVAEMRAWVAEEMGDEQLAFYTLQAKANPEDRWLDFVRPLAERIPSDEE 526
            ++LP CPYPGH NVSW C  C GA+HHL +R+AMEPL+R HGFKVHRVPNDGDCF+SSIKAA+      +  +G GA    G  +TV +MR WVAEEMG +QL FY LQA ANPEDRWLDFVRPL +RIPSD+E
Sbjct:  252 EQLPPCPYPGHQNVSWTCRACGGAKHHLTSRSAMEPLQRAHGFKVHRVPNDGDCFFSSIKAALPAAELARGDEGGGAAAGAGSALTVRQMREWVAEEMGQDQLDFYILQAGANPEDRWLDFVRPLVDRIPSDDE 385
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BLAST of mRNA_A-nodosum_M_contig883.30.1 vs. uniprot
Match: D8LS81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS81_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 4.510e-31
Identity = 155/428 (36.21%), Postives = 179/428 (41.82%), Query Frame = 0 
Query:  428 MEPLKRTHGFKVHRVPNDGDCFYSSIKAAVEPESPGKNKKGAGAVPAR-----GVTVAEMRAWVAEEMGDEQLAFYTLQAKANPEDRWLDFVRPLAERIPSDEEVEDDVEQEKRTSTRVASNASNR---------------------------------FPERAANVDEPSDQRSSCEDRGGKGRTDRGRGLGRKKTTPLKGRTLLAEEKSLKEITPTDCPRATTASI-----GKAGRPGR--RSRMGRGSTDLETVAK------------------------------------------KATSPKKPPTRKSARVGRHAQLSCKKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALPFVRSVDELRQFVRLEGSLVGHGRCMWADTFAHHVVSRRLGLTILFVDMVR--KAW 766
            MEPL+R HGFKVHRVPNDGDCF+SSIKAA+      +  +G     A       +TV +MR WVAEEMG +QL FY LQA ANPEDRWLDFVRPL +RIPSD+E                S                                                                T  G+  G+K   P   RT  A++       P D   AT A++       + R  R  R R GRG +                                                 KATSP+        RVG                 XXXXXXXXXXXXXXXXX                   LP V +V+ELR+FVRLEGS VGHG CMWADT AHHVVSRRL +TILFVDM R  +AW
Sbjct:    1 MEPLQRAHGFKVHRVPNDGDCFFSSIKAALPDGVAAERARGGXXXXAADCAGSALTVRQMREWVAEEMGQDQLDFYILQAGANPEDRWLDFVRPLVDRIPSDDEXXXXXXXXXXXXXXXXSYRGETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSGQPEGKK---PTSRRTAKADDTDA----PEDSECATLAAVVSPPSASSDRNARYLRRREGRGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKATSPR--------RVGEEGS------------GXXXXXXXXXXXXXXXXXETEAVGWRWENEVEEENEGLPVVETVEELRRFVRLEGSDVGHGNCMWADTHAHHVVSRRLKITILFVDMEREKRAW 401
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig883.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3H2_9PHAE1.480e-4766.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS81_ECTSI4.510e-3136.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 693..708
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 666..692
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 554..583
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 524..712
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 646..665
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 778..798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 590..605
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig883contigA-nodosum_M_contig883:255551..258909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig883.30.1mRNA_A-nodosum_M_contig883.30.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig883 254919..258996 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig883.30.1 ID=prot_A-nodosum_M_contig883.30.1|Name=mRNA_A-nodosum_M_contig883.30.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=799bp
MLKRHAPSRRPGSVSASAPLRSASNAMTSPNPKRPKPNPPIFDVAATNAA
TPRPNLQDRGEGPRIAGQKCEGDSPQMMDQGRSRLQTLNLSSIGGELLQR
SSDVAANVGGPSSLTAVEGNQNQSEGTSSRVFRRWCDESAVIADSKTITE
SSVLLASSKVLVEGDALAETTALCESLKITPTAVRPVRRVKRRQQHPGGD
WRVISTSSARGGTRIRVESDASSSERSLEKAGENDHPVQRFVENIFTSCG
TNQQQRDGPDDGNVSLPESLPALVSAAAVEGKVTGSGVGISLESIAMEPS
SQKVAKSTKVAATAEESGSVVSVDDPSETRKNSIVDVAPLAPGKLLAKKI
EHASRRSRRMPRETHNSLRRTEVPAATTKPADVRQSEKQRSEVLQELPGC
PYPGHANVSWVCWGCDGARHHLKTRAAMEPLKRTHGFKVHRVPNDGDCFY
SSIKAAVEPESPGKNKKGAGAVPARGVTVAEMRAWVAEEMGDEQLAFYTL
QAKANPEDRWLDFVRPLAERIPSDEEVEDDVEQEKRTSTRVASNASNRFP
ERAANVDEPSDQRSSCEDRGGKGRTDRGRGLGRKKTTPLKGRTLLAEEKS
LKEITPTDCPRATTASIGKAGRPGRRSRMGRGSTDLETVAKKATSPKKPP
TRKSARVGRHAQLSCKKKRCKEETQKEEAGANEIHAEKEGEEDHSDDEGS
DDDDGVSDDGALPFVRSVDELRQFVRLEGSLVGHGRCMWADTFAHHVVSR
RLGLTILFVDMVRKAWREQLIRVAMESKSDLSSSNENPTTSSSSKRCP*
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