prot_A-nodosum_M_contig8821.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8821.1.1
Unique Nameprot_A-nodosum_M_contig8821.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length148
Homology
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.660e-28
Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 0
Query:    2 AFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 147
            A+  A + EE+++KLP G  D  +++ + ++AIYGL  +G  W       L+  GFE+ +ADPCVFR+     VV+IIV+YVDDILV   S +D  + L  L   FP K+LGE  ++ GC I RD +A T+   Q  Y  +  ERF
Sbjct:  853 AYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERF 997          
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 119 bits (299), Expect = 1.670e-28
Identity = 57/146 (39.04%), Postives = 87/146 (59.59%), Query Frame = 0
Query:    2 AFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 147
            A+L  ++ EE++++ PEG+ D   +V RL+  +YGL  AG +W+KK   +L   GF R+ ADPCV+     GK+  I+ V+VDDI++  +S+     T+  L+  F +KDLGE    LG  I R+ K +T+   Q+ Y  T  ERF
Sbjct:  970 AYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERF 1114          
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.690e-28
Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 0
Query:    2 AFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 147
            A+  A + EE+++KLP G  D  +++ + ++AIYGL  +G  W       L+  GFE+ +ADPCVFR+     VV+IIV+YVDDILV   S +D  + L  L   FP K+LGE  ++ GC I RD +A T+   Q  Y  +  ERF
Sbjct: 1232 AYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERF 1376          
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.690e-28
Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 0
Query:    2 AFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 147
            A+  A + EE+++KLP G  D  +++ + ++AIYGL  +G  W       L+  GFE+ +ADPCVFR+     VV+IIV+YVDDILV   S +D  + L  L   FP K+LGE  ++ GC I RD +A T+   Q  Y  +  ERF
Sbjct: 1252 AYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERF 1396          
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.690e-28
Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 0
Query:    2 AFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 147
            A+  A + EE+++KLP G  D  +++ + ++AIYGL  +G  W       L+  GFE+ +ADPCVFR+     VV+IIV+YVDDILV   S +D  + L  L   FP K+LGE  ++ GC I RD +A T+   Q  Y  +  ERF
Sbjct: 1395 AYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERF 1539          
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 2.260e-28
Identity = 59/146 (40.41%), Postives = 89/146 (60.96%), Query Frame = 0
Query:    2 AFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 147
            A+  A + EE++++LP G  D  +++G+ ++AIYGL  +G  W       L+  GFE+ +ADPCVFR+     VV+IIV+YVDD+LV +ES +D  + L  L+  FP K+LGE  ++  C I RD +A T+   Q  Y     +RF
Sbjct:  278 AYTHATLDEEIFLRLPAGCGDKSHKIGKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDMLV-AESDEDCEELLASLKKKFPTKNLGECEWFHRCAIERDVEAGTLKISQTTYIDNMVKRF 422          
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 2.960e-28
Identity = 61/146 (41.78%), Postives = 86/146 (58.90%), Query Frame = 0
Query:    2 AFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 147
            A+  A + EE+++KLP G  D  +++ + ++AIYGL  +G  W       L+  GFE+ +ADPCVFR+     VV+IIV+YVDDILV   S +D  + L  L   FP K+LGE  ++ GC I RD  A T+   Q  Y  +  ERF
Sbjct:  444 AYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERF 588          
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A2P6SP23_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SP23_ROSCH)

HSP 1 Score: 119 bits (297), Expect = 3.100e-28
Identity = 59/148 (39.86%), Postives = 90/148 (60.81%), Query Frame = 0
Query:    2 AFLGADVTEELYVKLPEGYRDSPNQ--VGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 147
            AFL  D+ EE+Y++ PEG+     Q  V +L+K++YGL  A   W KKF   ++  G++R+ ADPCV+ +R  G   +I+++YVDD+L++ +     H+   DL  SF +KDLG     LG  ITRD +A+ +   Q+RY +   ERF
Sbjct:  936 AFLHGDLEEEIYMEQPEGFEVEGKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIHKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERF 1083          
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A6H5JIS9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS9_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 3.140e-28
Identity = 56/146 (38.36%), Postives = 85/146 (58.22%), Query Frame = 0
Query:    2 AFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 147
            A+  A + EE+++++P GY D  +++ + ++AIYGL  +G  W       L+  GFE+ +ADPCVFR+     VV++IV+YVDDILV   S +D  + L  L   FP K+ GE  ++ GC I RD +  T    Q  Y  +  +RF
Sbjct:   72 AYTHATLDEEVFLRIPAGYGDKSHKIVQAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMVIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNRGEYEWFDGCAIDRDVEPGTFKISQTAYIDSMVKRF 216          
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A2P6Q6P3_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6Q6P3_ROSCH)

HSP 1 Score: 115 bits (289), Expect = 1.700e-27
Identity = 58/148 (39.19%), Postives = 89/148 (60.14%), Query Frame = 0
Query:    2 AFLGADVTEELYVKLPEGYRDSPNQ--VGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 147
            AFL  D+ EE+Y++ PEG+     Q  V +L+K++YGL  A   W KKF   ++  G++R+ ADPCV+ +R  G   +I+++YVDD+L++ +      +   DL  SF +KDLG     LG  ITRD +A+ +   Q+RY +   ERF
Sbjct:   97 AFLHGDLEEEIYMEQPEGFEVERKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIRKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERF 244          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSG8_9PHAE1.660e-2841.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C3AKI0_9AGAM1.670e-2839.04Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A6H5JZQ8_9PHAE1.690e-2841.78Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE1.690e-2841.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE1.690e-2841.78Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JLS1_9PHAE2.260e-2840.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQN6_9PHAE2.960e-2841.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P6SP23_ROSCH3.100e-2839.86Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A6H5JIS9_9PHAE3.140e-2838.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P6Q6P3_ROSCH1.700e-2739.19Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..143
e-value: 3.4E-25
score: 89.0
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 2..147
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 17..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8821contigA-nodosum_M_contig8821:16432..16875 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8821.1.1mRNA_A-nodosum_M_contig8821.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8821 16432..17226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8821.1.1 ID=prot_A-nodosum_M_contig8821.1.1|Name=mRNA_A-nodosum_M_contig8821.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=148bp
MAFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGG
ELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTL
EDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERFK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR043502DNA/RNA_pol_sf