mRNA_A-nodosum_M_contig8821.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM) HSP 1 Score: 201 bits (512), Expect = 2.700e-55 Identity = 99/264 (37.50%), Postives = 158/264 (59.85%), Query Frame = 1
Query: 1 PDEPTTLHEAKVSPEWPQWRGALKREMDRQIARGV*KVVDRPKEKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQGLSSPTPTQSSIRIVLAVLALLDWRRRQLDVVMAFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 792
PD P TL +A+ SPEW W+ A++ E + + G ++ + +E+ ++G++ VF +K + G+V +YK R VA+GF QI G+ Y SP ++R +A+ A+ DW RQ+D+ A+L ++ EE++++ PEG+ D +V RL+ +YGL AG +W+KK +L GF R+ ADPCV+ GK+ I+ V+VDDI++ +S+ T+ L+ F +KDLGE LG I R+ K +T+ Q+ Y T ERF
Sbjct: 852 PDVPKTLKQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERF 1114
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 198 bits (503), Expect = 4.370e-54 Identity = 101/263 (38.40%), Postives = 157/263 (59.70%), Query Frame = 1
Query: 4 DEPTTLHEAKVSPEWPQWRGALKREMDRQIARGV*KVVDRPKEKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQGLSSPTPTQSSIRIVLAVLALLDWRRRQLDVVMAFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 792
DEP +L EA+ SPEWP+W A+K E D+ G ++ D PK++ +G K VF+RK ++G+V KYK R VA+G+ QI G+ + +P SIR +LA+ + +W Q+DV A+L D+ EE+Y++ PEG+ D ++ RL+K +YGL +G W++K EL G++R +ADPCV+ V II V+VDD+L+ + S + + DL+ F + DLGE +G I RD +A + QQ Y ++ +R+
Sbjct: 905 DEPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRY 1167
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY) HSP 1 Score: 187 bits (476), Expect = 1.830e-50 Identity = 103/257 (40.08%), Postives = 148/257 (57.59%), Query Frame = 1
Query: 4 DEPTTLHEAKVSPEWPQWRGALKREMDRQIARGV*KVVDRPKEKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQGLSSPTPTQSSIRIVLAVLALLDWRRRQLDVVMAFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQ 774
DEP T EA P+ +W+ A E+ + + V+RP+ + V+ K VFK K G DG +EKYK R VAKGF Q++G+ + +P +S+R +LA+ A LD Q+DV AFL D+ EE+Y+K+P G+ S + V +L KA+YGL AG W KK E GF R +D VF + G +++II +YVDD+L+LS++ EDL+S F + DLGE + LG ITRD R + Q +Y +
Sbjct: 924 DEPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVE 1179
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY) HSP 1 Score: 187 bits (475), Expect = 2.270e-50 Identity = 102/257 (39.69%), Postives = 148/257 (57.59%), Query Frame = 1
Query: 4 DEPTTLHEAKVSPEWPQWRGALKREMDRQIARGV*KVVDRPKEKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQGLSSPTPTQSSIRIVLAVLALLDWRRRQLDVVMAFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQ 774
DEP T EA P+ +W+ A E+ + + V+RP+ + V+ K VFK K G DG +EKYK R VAKGF Q++G+ + +P +S+R +LA+ A LD Q+DV AFL D+ EE+Y+K+P G+R S + + +L KA+YGL AG W KK E GF R +D VF + G +++II +YVDD+L+LS++ EDL+S F + DLGE + LG I RD R + Q +Y +
Sbjct: 601 DEPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVE 856
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A401H727_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H727_9APHY) HSP 1 Score: 186 bits (472), Expect = 5.320e-50 Identity = 96/258 (37.21%), Postives = 152/258 (58.91%), Query Frame = 1
Query: 19 LHEAKVSPEWPQWRGALKREMDRQIARGV*KVVDRPKEKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQGLSSPTPTQSSIRIVLAVLALLDWRRRQLDVVMAFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 792
L +A+ SPEW +W A+K E D+ G ++ D PK + +G K VF+RK ++ +V KYK R VA+G+ QI G+ + +P SIR +LA+ + +W Q+DV A+L D+ EE+Y++ PEG+ D ++ RL+K +YGL +G W++K EL+ G++R +ADPCV+ V II V+VDD+L+ + S + + DL+ F + DLGE +G I RD +A T+ QQ Y ++ +R+
Sbjct: 715 LTKAQASPEWSEWEKAVKAEYDQLQGMGTWELQDLPKYRNAVGCKWVFQRKTNKESQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGCKWNRKLHRELMELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGTLQISQQHYIESILKRY 972
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 184 bits (468), Expect = 2.110e-49 Identity = 96/261 (36.78%), Postives = 151/261 (57.85%), Query Frame = 1
Query: 10 PTTLHEAKVSPEWPQWRGALKREMDRQIARGV*KVVDRPKEKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQGLSSPTPTQSSIRIVLAVLALLDWRRRQLDVVMAFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 792
P ++ EA+ SPEW +W+ A+ EM G D P + +G K VF +K +DG + +YK R VA+G+ QI G+ Y +P S+R L + A+ D Q+DV A+L ++ EE+Y++ PEGY D +V RL+K +YGL +G W+++F +L GF + +AD CV++R G++ II V+VDD+L+ SE+ +D +T +L + F +KDLGE +G I RD + T+ Q++Y + RF
Sbjct: 879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRF 1138
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: Q02902_ARATH (Orf 3 (Fragment) n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q02902_ARATH) HSP 1 Score: 176 bits (446), Expect = 2.210e-48 Identity = 98/267 (36.70%), Postives = 157/267 (58.80%), Query Frame = 1
Query: 4 DEPTTLHEAKVSPEWPQWRGALKREMDRQIARGV*KVVDRPKEKTVLGTKTVFKRKVGQDGRVE--KYKCRFVAKGFRQIKGIHYQGLSSPTPTQSSIRIVLAVLALLDWRRRQLDVVMAFLGADVTEELYVKLPEGY--RDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 792
+EP + EA + EW +W+ A EMD I G +VD+PK++ ++G + +FK K G G VE +YK R VAKG+ Q +G+ YQ + +P +SIRI+++V+ D Q+DV AFL ++ EELY++ P+G+ D N+V L+K++YGL + W+K+F +I + F RS+ D CV+ ++ + + +++YVDD+L+ +SK + ++ E L F +KD+G S LG I RD K + Q RY +RF
Sbjct: 69 EEPQSYQEATSNKEWKKWKLATHEEMDSLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPG-VEPVRYKARLVAKGYTQREGVDYQEIFAPVAKHTSIRILMSVVVDQDLELEQMDVKTAFLHGELEEELYMEQPDGFISEDGENKVCLLKKSLYGLKQSPRQWNKRFSRFMIDQNFIRSEHDACVYVKQAGEQDHLYLLLYVDDMLIAGKSKSEINKVKEQLSMEFEMKDMGPASRILGIDIIRDRKNGVLRMSQARYIHNVVQRF 334
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A6D2J0E6_9BRAS (Uncharacterized protein n=3 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J0E6_9BRAS) HSP 1 Score: 177 bits (448), Expect = 9.950e-47 Identity = 98/266 (36.84%), Postives = 158/266 (59.40%), Query Frame = 1
Query: 4 DEPTTLHEAKVSPEWPQWRGALKREMDRQIARGV*KVVDRPKEKTVLGTKTVFKRKVGQDG-RVEKYKCRFVAKGFRQIKGIHYQGLSSPTPTQSSIRIVLAVLALLDWRRRQLDVVMAFLGADVTEELYVKLPEGYRDSP--NQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 792
+EP+ HEA+ S +W +W G + EM+ G +VDRPK+K V+G++ +++ K G G E++K R VA+GF Q +GI YQ + +P SIRI+++++ D Q+DV AFL ++ EELY++ PEG+ P +QV L+K++YGL A W+KKF ++ + F RS DPCV+ + + + +++YVDD+L+ ++S + ++ +L F +KDLG S LG ITR+ K T+ Q Y + +RF
Sbjct: 835 EEPSCYHEARRSKDWVKWNGGMTEEMESLWKNGTWIIVDRPKDKKVIGSRWLYRLKSGIPGVESERHKARVVARGFTQKEGIDYQEVFAPVVKHLSIRILMSLVVKEDLELEQMDVKTAFLHGELEEELYMEQPEGFVVDPKKDQVCLLKKSLYGLKQAPRQWNKKFNAFMMSQKFTRSGHDPCVYVKEVGDEEFIYLLLYVDDMLLAAKSITEVNKLKAELSREFEMKDLGAASRILGIDITRNRKEGTLCLSQSGYLKKVIQRF 1100
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY) HSP 1 Score: 175 bits (444), Expect = 3.280e-46 Identity = 100/262 (38.17%), Postives = 146/262 (55.73%), Query Frame = 1
Query: 4 DEPTTLHEAKVSPEWPQWRGALKREMDRQIARGV*KVVDRPKEKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQGLSSPTPTQSSIRIVLAVLALLDWRRRQLDVVMAFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAER 789
DEP T EA P+ W+ A+ E+ + V+RP+++ V+ K VFK K G DG ++KYK R VAKGF Q++GI + +P +S+R +LA+ A LD Q+DV AFL D+ EE+Y+ P G+R + N + RL+KA+YGL A W K+ E GF ++D VF + G +VII +YVDD+L+LS+ + +L+S F + DLGE + L I RD R + Q +Y + A ER
Sbjct: 622 DEPQTYEEAMARPDTVHWKAAMAEELHAFAKAELYDEVERPRDRKVVDCKWVFKIKRGPDGEIKKYKARLVAKGFTQVEGIDFTETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLEEEIYMNAPPGFRLNANIIWRLRKALYGLKQASREWYKRIRAEFERLGFTMCESDHSVFYKVDNG-TLVIIAIYVDDMLILSDDIDAVNTLKANLKSRFEMTDLGEARWILSMEILRDRPRRLLELSQHQYVEKALER 882
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Match: A0A4Y2Q6W6_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2Q6W6_ARAVE) HSP 1 Score: 171 bits (433), Expect = 3.790e-46 Identity = 96/267 (35.96%), Postives = 147/267 (55.06%), Query Frame = 1
Query: 7 EPTTLHEAKVSPEWPQWRGALKREMDRQIARGV*KVVDRPKEKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQGLSSPTPTQSSIRIVLAVLALLDWRRRQLDVVMAFLGADVTEELYVKLPEGYR--DSPNQVGR---LQKAIYGLMHAGLLWSKKFGGELIVEGFERSQADPCVFRRRHPGKVVVIIVVYVDDILVLSESKQDEHQTLEDLRSSFPIKDLGEISYYLGCHITRDCKARTVMFDQQRYAQTAAERF 792
EP T+ EA + W+ ++ + I ++VD+P+ K ++ K VFK K G +E+YK R VAKGF QI+G+ Y SP +++R++LA A+ DW QLD V+AF+ + EE+Y+K+PEG D N G+ L KA+ GL +G +W + L+ F +S D C + + K +VI+ +YVDD+L+ S S + ++ E L S+F +KDLG SY LG I RD K V +Q +Y + R+
Sbjct: 23 EPKTIDEAVNGVDRNHWKDSISETILSHIKNKTREIVDKPENKNIIKCKWVFKIKHNSKGEIERYKTRLVAKGFSQIEGVDYNETFSPVVRYATLRVLLAFAAIYDWEIDQLDAVIAFVQGTLDEEIYMKIPEGLNEYDQENLEGKVLKLNKALDGLKQSGRVWYQMLENGLVEMDFRQSSFDSCAYIKVDQNKDIVIVTIYVDDLLIFSNSVKLKNWVKEQLTSTFKMKDLGTASYCLGIKIERDRKNGYVSVNQTQYVEGVLRRY 289 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8821.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8821.1.1 >prot_A-nodosum_M_contig8821.1.1 ID=prot_A-nodosum_M_contig8821.1.1|Name=mRNA_A-nodosum_M_contig8821.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=148bp MAFLGADVTEELYVKLPEGYRDSPNQVGRLQKAIYGLMHAGLLWSKKFGGback to top mRNA from alignment at A-nodosum_M_contig8821:16432..17226- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8821.1.1 ID=mRNA_A-nodosum_M_contig8821.1.1|Name=mRNA_A-nodosum_M_contig8821.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=795bp|location=Sequence derived from alignment at A-nodosum_M_contig8821:16432..17226- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8821:16432..17226- >mRNA_A-nodosum_M_contig8821.1.1 ID=mRNA_A-nodosum_M_contig8821.1.1|Name=mRNA_A-nodosum_M_contig8821.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at A-nodosum_M_contig8821:16432..17226- (Ascophyllum nodosum dioecious)back to top |