prot_A-nodosum_M_contig8807.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8807.1.1
Unique Nameprot_A-nodosum_M_contig8807.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length148
Homology
BLAST of mRNA_A-nodosum_M_contig8807.1.1 vs. uniprot
Match: D7G6N9_ECTSI (Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N9_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 8.910e-38
Identity = 75/110 (68.18%), Postives = 88/110 (80.00%), Query Frame = 0
Query:   36 DDGTVAKLRPKAAVTMAEDTSVAAVCRALTKARNDAALLTGPRGGMTGIMTAIDLVRRVVAVGIDPDTTSAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSLDG 145
            DD TV+KLRPK AVT+ E  SV  VC+ +  ARNDAALLTG  GGMTGI+TAID +RRVVAV +DP++T+A EVMTPNPT+V +E  AMEAL IML RHFRHLPVR+  G
Sbjct: 1490 DDVTVSKLRPKPAVTVPEGMSVTEVCKVMANARNDAALLTGAGGGMTGIITAIDCIRRVVAVSVDPNSTAASEVMTPNPTTVLSEDSAMEALSIMLGRHFRHLPVRTPRG 1599          
BLAST of mRNA_A-nodosum_M_contig8807.1.1 vs. uniprot
Match: A0A836CBL7_9STRA (Myosin 29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL7_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.390e-24
Identity = 59/106 (55.66%), Postives = 71/106 (66.98%), Query Frame = 0
Query:   40 VAKLRPKAAVTMAEDTSVAAVCRALTKARNDAALLTGPRGGMTGIMTAIDLVRRVVAVGIDPDTTSAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSLDG 145
            VA LRPK  +TMA D  +  V  A+   R DA LL    G ++GI+T +DL  RVVA G+DP  TSA +VMT +P  V AE  AMEALG+M+ER FRHLPVRS DG
Sbjct: 2600 VAALRPKRPLTMASDALLVHVAEAMAAKRADACLLVASDGALSGIVTDVDLTVRVVAGGVDPYATSAADVMTRDPRCVGAEDSAMEALGVMVERRFRHLPVRSGDG 2705          
BLAST of mRNA_A-nodosum_M_contig8807.1.1 vs. uniprot
Match: A0A7S1B5L5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B5L5_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.840e-23
Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 0
Query:   36 DDGTVAKLRPKAAVTMAEDTSVAAVCRALTKARNDAALLTGPRGGMTGIMTAIDLVRRVVAVGIDPDTTSAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSLDG 145
            +D  V+KLRP+  +  +   +V +V + L + R DAALLTG RGG+ GI+T  D+ RR+VA   DP +TSA ++MTPNP  VS +  AM+AL  M+E HFRHLPV    G
Sbjct:  252 NDKIVSKLRPRKPMIGSSSDNVLSVVQMLCRKRGDAALLTGSRGGLVGILTDTDITRRLVAQHKDPSSTSASDIMTPNPKVVSMDDSAMDALACMIENHFRHLPVVDSSG 361          
BLAST of mRNA_A-nodosum_M_contig8807.1.1 vs. uniprot
Match: A0A7S1B5S0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B5S0_9STRA)

HSP 1 Score: 103 bits (257), Expect = 5.290e-23
Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 0
Query:   40 VAKLRPKAAVTMAEDTSVAAVCRALTKARNDAALLTGPRGGMTGIMTAIDLVRRVVAVGIDPDTTSAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSLDG 145
            V+KLRP+  +  +   +V +V + L + R DAALLTG RGG+ GI+T  D+ RR+VA   DP +TSA ++MTPNP  VS +  AM+AL  M+E HFRHLPV    G
Sbjct:  179 VSKLRPRKPMIGSSSDNVLSVVQMLCRKRGDAALLTGSRGGLVGILTDTDITRRLVAQHKDPSSTSASDIMTPNPKVVSMDDSAMDALACMIENHFRHLPVVDSSG 284          
BLAST of mRNA_A-nodosum_M_contig8807.1.1 vs. uniprot
Match: A0A7S0GJB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GJB2_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.950e-23
Identity = 52/106 (49.06%), Postives = 69/106 (65.09%), Query Frame = 0
Query:   35 SDDGTVAKLRPKAAVTMAEDTSVAAVCRALTKARNDAALLTGPRGGMTGIMTAIDLVRRVVAVGIDPDTTSAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPV 140
            SD+  V+KLRPK     + D S+  V + L+  R+DAAL+ G  GG+ GIMT +D+ RRVVA  +D  +   + VMTPNPT V+    AM AL IM++ HFRHLPV
Sbjct:    6 SDERPVSKLRPKKPNIASVDDSILKVTQMLSSKRSDAALIMGRDGGLAGIMTDVDITRRVVAQRLDASSAIVEMVMTPNPTCVTMSDSAMSALSIMVDNHFRHLPV 111          
BLAST of mRNA_A-nodosum_M_contig8807.1.1 vs. uniprot
Match: A0A7S2PMW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PMW1_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.740e-22
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 0
Query:   40 VAKLRPKAAVTMAEDTSVAAVCRALTKARNDAALLTGPRGGMTGIMTAIDLVRRVVAVGIDPDTTSAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSLDG 145
            V+KLRPK  +  + + S+  V R L   R DAAL+T   GG+ GI+T  D+ RRVVA  I+P++TS   VMT NPT V+    AM+ALG M+E HFRHLPV   +G
Sbjct:   25 VSKLRPKKPLISSSNDSILEVTRMLASKRGDAALITSANGGLAGIITDTDVTRRVVAKYIEPESTSISSVMTANPTCVAMSDSAMDALGTMVENHFRHLPVVDDNG 130          
BLAST of mRNA_A-nodosum_M_contig8807.1.1 vs. uniprot
Match: A0A7S1VMX7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VMX7_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 8.070e-21
Identity = 55/107 (51.40%), Postives = 70/107 (65.42%), Query Frame = 0
Query:   39 TVAKLRPKAAVTMAEDTSVAAVCRALTKARNDAALLTGPRGGMTGIMTAIDLVRRVVAVGIDPDTTSAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSLDG 145
            TVAKLRPK  V  A + SV ++ + L K R DAAL+    G ++GIMT  D+ RRVVA  + P +T  ++ MTPNPT V  +  AMEALGIM+E+ FRHLPV    G
Sbjct: 1833 TVAKLRPKKPVQAACEDSVLSLSQMLAKRRGDAALIVSATGRLSGIMTDKDVCRRVVAKRMMPVSTLVQDAMTPNPTCVRLQDSAMEALGIMIEKRFRHLPVVDEHG 1939          
BLAST of mRNA_A-nodosum_M_contig8807.1.1 vs. uniprot
Match: A0A7S2BCV6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BCV6_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.640e-19
Identity = 47/110 (42.73%), Postives = 71/110 (64.55%), Query Frame = 0
Query:   36 DDGTVAKLRPKAAVTMAEDTSVAAVCRALTKARNDAALLTGPRGGMTGIMTAIDLVRRVVAVGIDPDTTSAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSLDG 145
            ++ +VAKLRPK  V ++ D+S+  V +A+   R D+ LLT   G + GI+T+ D++R+VVA   DPD    +++MT  P  V  E  A++AL +M++ HFRHLPV   DG
Sbjct:   68 NERSVAKLRPKKPVVLSSDSSILEVTKAMAAGRTDSVLLTSGDGSLAGIVTSTDMMRKVVATSKDPDD-PVEDIMTKKPKCVCMEDSAIDALIMMMDNHFRHLPVLDSDG 176          
BLAST of mRNA_A-nodosum_M_contig8807.1.1 vs. uniprot
Match: A0A1Z5JXP4_FISSO (Myosin I n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JXP4_FISSO)

HSP 1 Score: 92.0 bits (227), Expect = 8.360e-19
Identity = 51/110 (46.36%), Postives = 65/110 (59.09%), Query Frame = 0
Query:   35 SDDGTVAKLRPKAAVTMAEDTSVAAVCRALTKARNDAALLTGPRGGMTGIMTAIDLVRRVVAVGIDPDTTSAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSLD 144
            S +  V+ LRP   +   +  SV  V + LT  R  AAL+T   GG+ GI+T  D+ RRVVA+G+ P TT    VMT NP  V+    AM+AL IM+E HFRHLPV   D
Sbjct: 1649 SGEHPVSMLRPMKPLLSTDHDSVLNVAQFLTAKRGVAALITNSTGGLAGIVTDTDITRRVVAMGLSPATTEVSNVMTKNPACVATTDSAMDALTIMVENHFRHLPVVDSD 1758          
BLAST of mRNA_A-nodosum_M_contig8807.1.1 vs. uniprot
Match: A0A2P4XXW5_9STRA (Myosin-like protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XXW5_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.050e-18
Identity = 50/106 (47.17%), Postives = 68/106 (64.15%), Query Frame = 0
Query:   40 VAKLRPKAAVTMAEDTSVAAVCRALTKARNDAALLTGPRGGMTGIMTAIDLVRRVVAVGIDPDTTSAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSLDG 145
            V+KLRP  A+T++E  SVA   + ++ A+ DAAL+ G  GG+ GI+T  D+ RRVVA+G DP   S  + MTP+P  V     AM+A+ +MLE  FRHLPV    G
Sbjct:  612 VSKLRPSKAITISETFSVADAAKEMSVAQTDAALIIGRDGGLLGILTDTDVTRRVVALGNDPFYVSVLDAMTPDPKFVDERDSAMDAMFMMLEGKFRHLPVVDETG 717          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8807.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6N9_ECTSI8.910e-3868.18Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A836CBL7_9STRA1.390e-2455.66Myosin 29 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A7S1B5L5_9STRA1.840e-2349.09Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S1B5S0_9STRA5.290e-2350.00Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S0GJB2_9STRA6.950e-2349.06Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S2PMW1_9STRA1.740e-2250.00Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S1VMX7_9STRA8.070e-2151.40Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2BCV6_9STRA1.640e-1942.73Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A1Z5JXP4_FISSO8.360e-1946.36Myosin I n=1 Tax=Fistulifera solaris TaxID=1519565... [more]
A0A2P4XXW5_9STRA1.050e-1847.17Myosin-like protein (Fragment) n=1 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000644CBS domainPFAMPF00571CBScoord: 106..140
e-value: 0.0015
score: 19.0
IPR046342CBS domain superfamilyGENE3D3.10.580.10coord: 17..145
e-value: 1.2E-20
score: 75.6
IPR046342CBS domain superfamilySUPERFAMILY54631CBS-domain paircoord: 38..141
NoneNo IPR availablePANTHERPTHR48108CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTICcoord: 21..140
NoneNo IPR availablePANTHERPTHR48108:SF5CBS AND PB1 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_1G06780)coord: 21..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8807contigA-nodosum_M_contig8807:10313..11706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8807.1.1mRNA_A-nodosum_M_contig8807.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8807 10313..11706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8807.1.1 ID=prot_A-nodosum_M_contig8807.1.1|Name=mRNA_A-nodosum_M_contig8807.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=148bp
MTPVTAVTTPQRVASVASVRSAASVRSTSSPSAPSDDGTVAKLRPKAAVT
MAEDTSVAAVCRALTKARNDAALLTGPRGGMTGIMTAIDLVRRVVAVGID
PDTTSAKEVMTPNPTSVSAESGAMEALGIMLERHFRHLPVRSLDGWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000644CBS_dom
IPR046342CBS_dom_sf