prot_A-nodosum_M_contig8802.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8802.1.1
Unique Nameprot_A-nodosum_M_contig8802.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length139
Homology
BLAST of mRNA_A-nodosum_M_contig8802.1.1 vs. uniprot
Match: D7FJT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJT4_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 1.630e-47
Identity = 87/105 (82.86%), Postives = 93/105 (88.57%), Query Frame = 0
Query:    1 MQKQMRDGGSGSGSVVLDVRADPDMVLGLLTKYEKYAEMIDTVRECEVFPQ-EGLDKRKVEVTVSRFRLHIRVVMSFLRDRNMVRFELDPDCTKAGRAVLREGDG 104
            +QKQ R GGSGSGSVV+DVRADPD+VLGLLTKYE YAEMIDTVRECEVFPQ E  D RKV V VSRF+LHIRVVMS LR+RNMV+FELDPDCTKAGRAVLRE  G
Sbjct:  258 VQKQTRQGGSGSGSVVVDVRADPDVVLGLLTKYEDYAEMIDTVRECEVFPQGETADSRKVGVMVSRFKLHIRVVMSLLRERNMVQFELDPDCTKAGRAVLREATG 362          
BLAST of mRNA_A-nodosum_M_contig8802.1.1 vs. uniprot
Match: A0A835ZLE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE1_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.290e-18
Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 0
Query:    1 MQKQMRDGGSGSGSVVLDVRADPDMVLGLLTKYEKYAEMIDTVRECEVFPQEGLDKRKVEVTVSRFRLHIRVVMSFLRDRNMVRFELDPDCTKAGRAVLREGDGL 105
            +Q+Q R G SG+G VV+DVRAD    + +L  +  Y +MIDTVRE  +  Q G    K E  +SRF+L +RV++      + V FELDPDC  AG++VL +  G+
Sbjct:   37 VQRQTRQGSSGTGLVVVDVRADAATAMEVLQSFAAYGDMIDTVREARILGQRG-GVTKAEFLISRFKLRVRVLLKSNPAASTVEFELDPDCKAAGKSVLNDARGI 140          
BLAST of mRNA_A-nodosum_M_contig8802.1.1 vs. uniprot
Match: A0A7S2SKJ0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKJ0_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 9.820e-13
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 0
Query:    1 MQKQMRDGGSGSGSVVLDVRADPDMVLGLLTKYEKYAEMIDTVRECEVFPQEGLDKRKVEVTVSRFRLHIRVVMSFLRDRNMVRFELDPDCTKAGRAVLREGDG 104
            +Q+Q RDG +G+G VV+D+ A P+ V  LL  +E+Y EMI TVR   + P   L++ +    +S+F L + VV  F R R  +RF LD   + +   V+++ DG
Sbjct:   51 VQRQTRDGVTGNGFVVMDLEASPETVWSLLLDFERYPEMISTVRSAALRPGSTLERARATFVLSKFLLEVNVVHQFDRRRQQLRFCLD---SASQNFVMKQADG 151          
BLAST of mRNA_A-nodosum_M_contig8802.1.1 vs. uniprot
Match: A0A7S1EJW5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EJW5_HEMAN)

HSP 1 Score: 73.2 bits (178), Expect = 1.930e-12
Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 0
Query:    1 MQKQMRDGGSGSGSVVLDVRADPDMVLGLLTKYEKYAEMIDTVRECEVFPQEGLDKRKVEVTVSRFRLHIRVVMSFLRDRNMVRFELDPD 90
            +Q+Q RDG  G+GSVV+DV+AD   V  +LT  E+Y E I TVR C +  + G    K +  +SRF L I  V+   R+ NM+RFELD +
Sbjct:  233 VQRQERDGRVGTGSVVVDVKADISTVFAVLTDLERYVERIHTVRRCTI-TERGAMVAKAQFALSRFNLVINTVLRCDREANMLRFELDKE 321          
BLAST of mRNA_A-nodosum_M_contig8802.1.1 vs. uniprot
Match: W7U413_9STRA (Polyketide_cyc domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U413_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 8.530e-9
Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = 0
Query:    1 MQKQMRDGGSGSGSVVLDVRADPDMVLGLLTKYEKYAEMIDTVRECEVFPQEGLDKRKVEVTVSRFRLHIRVVMSFLRDRNMVRFELDPDCTKAGRAVLREGDG 104
            +Q Q+R+G  GSG VV+DV AD   V   L  +E+YA+MI T+R+ ++  +      K   T+S+FR  + VV     + N + F LDPDC +  R++L   +G
Sbjct:  189 VQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSR-WPSLTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQY-RSILEMAEG 290          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8802.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FJT4_ECTSI1.630e-4782.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZLE1_9STRA1.290e-1843.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SKJ0_9STRA9.820e-1338.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1EJW5_HEMAN1.930e-1245.56Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
W7U413_9STRA8.530e-937.50Polyketide_cyc domain-containing protein n=3 Tax=M... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 15..100
e-value: 3.1E-5
score: 25.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8802contigA-nodosum_M_contig8802:353..4967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8802.1.1mRNA_A-nodosum_M_contig8802.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8802 167..5049 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8802.1.1 ID=prot_A-nodosum_M_contig8802.1.1|Name=mRNA_A-nodosum_M_contig8802.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=139bp
MQKQMRDGGSGSGSVVLDVRADPDMVLGLLTKYEKYAEMIDTVRECEVFP
QEGLDKRKVEVTVSRFRLHIRVVMSFLRDRNMVRFELDPDCTKAGRAVLR
EGDGLLLCGVAARRQAGLLARVVMCRGGREPLRAWGDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf