prot_A-nodosum_M_contig880.15.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig880.15.1
Unique Nameprot_A-nodosum_M_contig880.15.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length864
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig880.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 541..574
e-value: 6.8E-8
score: 32.9
coord: 237..271
e-value: 7.6E-8
score: 32.8
coord: 199..233
e-value: 1.8E-7
score: 31.6
coord: 705..725
e-value: 0.84
score: 10.3
coord: 47..80
e-value: 0.0019
score: 18.8
coord: 427..461
e-value: 2.5E-6
score: 28.0
coord: 654..688
e-value: 6.2E-5
score: 23.5
coord: 9..42
e-value: 2.1E-4
score: 21.8
coord: 161..195
e-value: 1.1E-4
score: 22.7
coord: 275..308
e-value: 1.4E-6
score: 28.7
coord: 503..536
e-value: 1.6E-6
score: 28.5
coord: 123..153
e-value: 1.1E-4
score: 22.8
coord: 85..117
e-value: 0.0016
score: 19.0
coord: 389..423
e-value: 5.6E-8
score: 33.2
coord: 585..612
e-value: 12.0
score: 6.7
coord: 351..385
e-value: 9.4E-7
score: 29.3
coord: 465..499
e-value: 1.1E-7
score: 32.3
coord: 313..346
e-value: 9.9E-7
score: 29.2
NoneNo IPR availableGENE3D6.10.140.110coord: 519..584
e-value: 9.9E-10
score: 40.5
coord: 176..242
e-value: 3.0E-9
score: 39.0
coord: 252..294
e-value: 7.1E-5
score: 25.0
coord: 367..430
e-value: 1.2E-11
score: 46.7
coord: 439..504
e-value: 9.4E-9
score: 37.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 793..828
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 791..863
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 843..863

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig880contigA-nodosum_M_contig880:165379..167970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig880.15.1mRNA_A-nodosum_M_contig880.15.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig880 164079..168293 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig880.15.1 ID=prot_A-nodosum_M_contig880.15.1|Name=mRNA_A-nodosum_M_contig880.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=864bp
MVDVKNRTCRTRGCCSRPFFGVAGTRIAEYCAQHASDGMINVIRRKCINE
SCGIKRSLGVAGTKPAECCAEHAPDGMVDVTSRKCRTEGCVKGPSFGVAG
TKTVGYCAQHAPGGIVNAYSRKCGTEGCGTVPSFGVVGTKTAAFCAQHAP
DGMGHVKSRKCKTVGCRKRSSFGVAGTKIAEYCAQHTPNGMVDVKNRKCK
TDGCGKRSSFGVEGTKIEEYCAQHAPDGMVNVYGRKCKTEGCRKGPSFGV
AGTKVAEYCGQHAPDGMVDVKKRKCGTDGCRTGPSFGVPGTRTLEYCAQH
APVGMVDVHSRRCKTEGCGKVPSFGVIGTKTPQFCAQHAPDGTVNVNKRK
CRTVGCGKQPSFGVAGTKTVEYCAQHAPNGMVDVKNRKCRTDGCGKRPSF
GVAGSNTVEYCAQHAPDEMVDVYSRKCKTEGCGKGPSFGVAGTKVAEYCA
QHAPDGMVHVKKRKCGTDGCRTGASFGVAGTRTVEYCAQHAPDGMVDVYS
RRCKTEGCAKQPSFGVVGTNTAKYCAQHAPSGTVNVNKRKCRTVGCGKQP
SYGVAGTKTAEYCAQHSPDGMVNVCRTMSRTVSGKRASFGMTSTKTTMNF
AQHSLNEMVDVRRRKCRTEGCGKQPSLGVPGSNTLEYCEQQAPDPVVGVF
SRKCKTEGCVKDPSSGVPGTKTAEYCVQHAPDGMVDVKSRNQFRIGGCGK
ILSLGVAGTKTAEYCSQHAPNGMVDACSRKCITGGCEKELSFRVANTRTA
EHCAQHARLKCGVEGYREGEVDPHHSGKETFANILPKSLKRQTIYPPATT
SPPSEGSQGSRKRVRYTEITSTAPVQPISRESAGGAGTMSDIEGQKSPVN
QDASVKAEVQLSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys