prot_A-nodosum_M_contig880.12.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig880.12.1
Unique Nameprot_A-nodosum_M_contig880.12.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1029
Homology
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BLAST of mRNA_A-nodosum_M_contig880.12.1 vs. uniprot
Match: A0A6H5JQR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQR8_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 1.230e-45
Identity = 92/142 (64.79%), Postives = 112/142 (78.87%), Query Frame = 0 
Query:  136 VAPAAKQRKPSTSALAVYSWGMEARKGGVRETFTATIAQAEMTKVWSNGDVVINSGGRGATPAARVILNIFLKVFKVEIAEVDDGGGGGKAGVGGWQIEHQTGYRQAFSENMCMSLFANRDWSYIKTKLKRLPTKIFLPKDE 277
            V PA K+R+P ++A+A YSW +E RKGGVRE  TATI  A+M KVWSNGDVVIN+ G+G TPA +VILN+ L VFKVEIAE +   GG +     W IEH++GY+Q FSENM MSLF NRDWSY+KT+LKRLPTKIFLPK++
Sbjct:  169 VVPAPKRRRPPSTAIATYSWSVEPRKGGVREKLTATIDAADMAKVWSNGDVVINTAGKGITPATKVILNLLLGVFKVEIAESERKSGGDEREPKTWHIEHKSGYKQPFSENMNMSLFPNRDWSYMKTRLKRLPTKIFLPKEQ 310
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BLAST of mRNA_A-nodosum_M_contig880.12.1 vs. uniprot
Match: D7FWF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWF6_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.240e-45
Identity = 91/140 (65.00%), Postives = 112/140 (80.00%), Query Frame = 0 
Query:  138 PAAKQRKPSTSALAVYSWGMEARKGGVRETFTATIAQAEMTKVWSNGDVVINSGGRGATPAARVILNIFLKVFKVEIAEVDDGGGGGKAGVGGWQIEHQTGYRQAFSENMCMSLFANRDWSYIKTKLKRLPTKIFLPKDE 277
            PA ++R+P ++A A Y+WG+E RKGGVRE  TATI  A+M KVWSNGDVVIN+ G+G TPA +VILN+ L VFKVEIAE +   GG +     W IEH++GY+QAFSENM MSLF NRDWSY+KT+LKRLPTKIFLPK++
Sbjct:  223 PAPQRRRPPSTATATYTWGVEPRKGGVREKLTATIDAADMAKVWSNGDVVINTAGKGITPATKVILNLVLGVFKVEIAESESKSGGDERKPKTWHIEHKSGYKQAFSENMNMSLFPNRDWSYMKTRLKRLPTKIFLPKEQ 362
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig880.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQR8_9PHAE1.230e-4564.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWF6_ECTSI1.240e-4565.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..952
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 876..902
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 967..1005
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 542..561
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 909..932
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 806..825
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 573..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 835..850
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 967..1028
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..443

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig880contigA-nodosum_M_contig880:135196..146471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig880.12.1mRNA_A-nodosum_M_contig880.12.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig880 134822..146576 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig880.12.1 ID=prot_A-nodosum_M_contig880.12.1|Name=mRNA_A-nodosum_M_contig880.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1029bp
MDGDEQALQELKNERQKSDVEKQEDTNAGHETSPTGGQPPDGGEIEARQP
EQAVCDGRAEEGAQRAVTERTTAQSMLHGVGGETATFRDDGVANQAQQWR
PPGALGDRERAGGAGGMTTASGARNRGISGGVWARVAPAAKQRKPSTSAL
AVYSWGMEARKGGVRETFTATIAQAEMTKVWSNGDVVINSGGRGATPAAR
VILNIFLKVFKVEIAEVDDGGGGGKAGVGGWQIEHQTGYRQAFSENMCMS
LFANRDWSYIKTKLKRLPTKIFLPKDEQPPGPALAEQQRQRQRQHPNTSA
GAGYFLGGRWPHDGPPEKALRGAPRGGGMAHLEHSWEGRGYHDDRSHLSS
AASAAAVAAAGEGGVSPELVRQLLRAAGGSTGGIAALAAAAVAAAAASGG
GGGGSGDPVGSRAVKSRRVSPGKAGDAGGESGGNDAALIQMTAQTPLSHG
APVAVVAEAVASSPAHGSDPGASAGGAQEQVDLHHASENRSKGGRRRGQR
SRSVSSEEGGGGDVDASAVTHRRGMRPTQSPEGWRPWRPEDNSPTPPRRP
RAEDVNSSLWRGHGRRRRRVDEGRRRMAFDGRDQGGGDAWRDGGFDRDGG
FGRDGRFSGDRRSSGDRRFSGGYVRDGGFGRGGNSFDKDGSFGRGGGLSR
GGGFGKDGGFGKGGFGRSGGFGRGGGNGGQGWRSLSPPPLHGVVWTPYRN
ADGDNEGQRDSAARLGGREYGWGGMNLPSENGGHGLADTGEYRGRAETRG
GGNDLAGEAAQAGVASIRGESRGPDYHTGENGDPGIGLSRRESYDPEQYD
PDAYDPGEVTVKRDVDNDGGVGKKRKSVSRSGSLTRTSKRHRRHSRSGSR
SRSSRRSERRNGSSPGSAGDTLPEAGPAKERFDHSPRRGYEKDYRGSRGD
ADSRGGMNDSWRYQETNHFTAEQSSQHTQPLVESDRRGFDYGSGGGFEGG
VGASWADAASFTVQQQQQQWQYPLQPRSGLAQQQQLPAPQHQQPSGQPPQ
VHVHTTQQHQEEEPPPPPPRKQLSVQQQ*
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