prot_A-nodosum_M_contig88.68.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig88.68.2
Unique Nameprot_A-nodosum_M_contig88.68.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length246
Homology
BLAST of mRNA_A-nodosum_M_contig88.68.2 vs. uniprot
Match: D7FYA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYA5_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.120e-45
Identity = 91/117 (77.78%), Postives = 106/117 (90.60%), Query Frame = 0
Query:    1 MVKEGRKDRALLLLKVKKLKLEQANKADAQLLSVYQLMDTIDWETQQMKVYYALKEGNQALTRLHEEMPLEKVEELMADTAENIAMEEEISKAIGGSSWSQASERDLLAELAAIEEE 117
            MVKE RKDRALLLLK+KKLK +QA+KA +QLLSV+Q+MDTIDWETQQ++V+ ALKEGN AL +LHEEMPL+KVEELMADTAE+IAMEEEISKAIGGS W+ A+E DLLAELA +E E
Sbjct:   54 MVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFNALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGS-WTDANEEDLLAELAELESE 169          
BLAST of mRNA_A-nodosum_M_contig88.68.2 vs. uniprot
Match: A0A836CK96_9STRA (Snf7-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK96_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.340e-26
Identity = 62/117 (52.99%), Postives = 88/117 (75.21%), Query Frame = 0
Query:    1 MVKEGRKDRALLLLKVKKLKLEQANKADAQLLSVYQLMDTIDWETQQMKVYYALKEGNQALTRLHEEMPLEKVEELMADTAENIAMEEEISKAIGGSSWSQASERDLLAELAAIEEE 117
            +VKEGRKDRAL+LLK+K+ K EQA+KADAQL +V +L++T++WE  Q +V  AL EG +AL  LHE MP+E VE+LMADT E +  E++++  I G+ WS  +E +LL E  A+++E
Sbjct:   61 LVKEGRKDRALVLLKIKRFKAEQASKADAQLFTVTELLETVEWEGHQAQVLAALSEGTKALNSLHEAMPIEDVEQLMADTQEALEYEQQVNSIIAGA-WSPENEDELLEEFEALQKE 176          
BLAST of mRNA_A-nodosum_M_contig88.68.2 vs. uniprot
Match: A0A7S2BZN2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZN2_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.720e-18
Identity = 55/113 (48.67%), Postives = 80/113 (70.80%), Query Frame = 0
Query:    3 KEGRKDRALLLLKVKKLKLEQANKADAQLLSVYQLMDTIDWETQQMKVYYALKEGNQALTRLHEEMPLEKVEELMADTAENIAMEEEISKAIGGSSWSQASERDLLAELAAIE 115
            K G+KDRA+L +K+K+ K +Q  + DAQLL+V +++ TI WET+ MKV  AL+EGN+AL  +H  M ++KVE LM +TAE IA+++EI   + G   +   E +L AELAA+E
Sbjct:   74 KAGKKDRAVLCMKMKRYKEKQVGQVDAQLLTVEEMVQTIQWETETMKVVEALQEGNKALDAIHSVMSVDKVEALMDETAEAIAVQQEIDGLLSGEDIA-VDEGELEAELAAME 185          
BLAST of mRNA_A-nodosum_M_contig88.68.2 vs. uniprot
Match: A0A484DZ78_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZ78_BRELC)

HSP 1 Score: 94.4 bits (233), Expect = 2.170e-18
Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 0
Query:    1 MVKEGRKDRALLLLKVKKLKLEQANKADAQLLSVYQLMDTIDWETQQMKVYYALKEGNQALTRLHEEMPLEKVEELMADTAENIAMEEEISKAIGGSSWSQASERDLLAELAAIE 115
            +++ G++DRA L LK+KK K +Q ++AD  L+ V  L+DT++WETQQ+KV+  LK GN  L  +H+EM +E VEELM +T E  A   EIS+ IGGS  +   E D+L ELA IE
Sbjct:   65 LLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLSLLDTVEWETQQLKVFEGLKAGNLILNAIHKEMTVEAVEELMLETEEAQATASEISRIIGGS-LTVEDEDDVLCELARIE 178          
BLAST of mRNA_A-nodosum_M_contig88.68.2 vs. uniprot
Match: H3H1K0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1K0_PHYRM)

HSP 1 Score: 90.5 bits (223), Expect = 2.640e-18
Identity = 59/134 (44.03%), Postives = 89/134 (66.42%), Query Frame = 0
Query:    1 MVKEGRKDRALLLLKVKKLKLEQANKADAQLLSVYQLMDTIDWETQQMKVYYALKEGNQALTRLHEEMPLEKVEELMADTAENIAMEEEISKAIGGSSWSQASERDLLAELAAIEEENQ----ASLPESQAAAV 130
            +++ G++DRA L LK+KK K +Q ++AD  L+ V  ++DT++WETQQ++V+  LK GN  L  +H+EM +E VEELM +T E  A   EIS+ IGGS  +   E  +L+ELA IE+       A++PE+ A A+
Sbjct:   69 LLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMMETEEAQATANEISRVIGGS-LTVEDEDAVLSELAEIEKMEADALAAAMPEAPATAL 201          
BLAST of mRNA_A-nodosum_M_contig88.68.2 vs. uniprot
Match: A0A5D6XUA9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUA9_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 5.230e-18
Identity = 60/127 (47.24%), Postives = 83/127 (65.35%), Query Frame = 0
Query:    6 RKDRALLLLKVKKLKLEQANKADAQLLSVYQLMDTIDWETQQMKVYYALKEGNQALTRLHEEMPLEKVEELMADTAENIAMEEEISKAIGGSSWSQASERDLL--AELAAIEEENQA-SLPESQAAA 129
            ++DRA L LKVKK K +Q  +AD  LL+V +++DT++WETQQ+KV+  LK GN  L  +H+EM +E VE LM +T E      EIS+ IGGS   +  +  LL  AE+ A+E E  A +LPE+  AA
Sbjct:   75 KRDRAKLALKVKKFKEQQMKQADEHLLTVLEMLDTVEWETQQLKVFEGLKAGNSLLNAIHQEMSVEAVENLMLETEEAQETANEISRLIGGSLTLEDEDAVLLELAEIEALEAEKLALALPEAPVAA 201          
BLAST of mRNA_A-nodosum_M_contig88.68.2 vs. uniprot
Match: A0A4D9D5S7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S7_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 5.300e-18
Identity = 53/110 (48.18%), Postives = 83/110 (75.45%), Query Frame = 0
Query:    1 MVKEGRKDRALLLLKVKKLKLEQANKADAQLLSVYQLMDTIDWETQQMKVYYALKEGNQALTRLHEEMPLEKVEELMADTAENIAMEEEISKAIGGSSWSQASERDLLAE 110
            +V  GRKDRALL+LK+++L+ ++  KA  QLL+V QL+  I+WE +Q++V+ ALK GNQAL  +H+ + LE+V++LMADTA++IA E+EIS+ +  +  S  +E ++L E
Sbjct:   61 LVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNN-LSAGAEEEVLRE 169          
BLAST of mRNA_A-nodosum_M_contig88.68.2 vs. uniprot
Match: W2QKK3_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QKK3_PHYPN)

HSP 1 Score: 89.4 bits (220), Expect = 7.570e-18
Identity = 54/115 (46.96%), Postives = 79/115 (68.70%), Query Frame = 0
Query:    1 MVKEGRKDRALLLLKVKKLKLEQANKADAQLLSVYQLMDTIDWETQQMKVYYALKEGNQALTRLHEEMPLEKVEELMADTAENIAMEEEISKAIGGSSWSQASERDLLAELAAIE 115
            +++ G++DRA L LK+KK K +Q ++AD  L+ V  ++DT++WETQQ++V+  LK GN  L  +H+EM +E VEELM +T E  A   EIS+ IGGS  +   E  +L+ELA IE
Sbjct:   69 LLQVGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVESVEELMLETEEAQATANEISRIIGGS-LTVEDEDAVLSELAEIE 182          
BLAST of mRNA_A-nodosum_M_contig88.68.2 vs. uniprot
Match: A0A6G0XQ97_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQ97_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.160e-17
Identity = 51/116 (43.97%), Postives = 84/116 (72.41%), Query Frame = 0
Query:    1 MVKEGRKDRALLLLKVKKLKLEQANKADAQLLSVYQLMDTIDWETQQMKVYYALKEGNQALTRLHEEMPLEKVEELMADTAENIAMEEEISKAIGGSSWSQASERDLLAELAAIEE 116
            ++++ ++DRA L L+++K K +Q  +ADA L++V Q++D+++WE+QQ++++  LK GN  L  +H+EM +E VE+LM +T E  A  +EIS+ IG S  S   E ++LAELAAIE+
Sbjct:   70 LLEKKQRDRAKLCLQLRKFKEQQIEQADAHLMNVLQMVDSVEWESQQLQIFEGLKAGNSVLDAIHKEMTVEAVEDLMEETREAQARADEISRLIGNS-LSVDDEDEILAELAAIEQ 184          
BLAST of mRNA_A-nodosum_M_contig88.68.2 vs. uniprot
Match: A0A3M6VKN6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKN6_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.390e-17
Identity = 54/115 (46.96%), Postives = 79/115 (68.70%), Query Frame = 0
Query:    1 MVKEGRKDRALLLLKVKKLKLEQANKADAQLLSVYQLMDTIDWETQQMKVYYALKEGNQALTRLHEEMPLEKVEELMADTAENIAMEEEISKAIGGSSWSQASERDLLAELAAIE 115
            +++ G++DRA L LK+KK K +Q ++AD  L+ V  ++DT++WETQQ++V+  LK GN  L  +H+EM +E VEELM +T E  A   EIS+ IGGS  +   E  +L+ELA IE
Sbjct:   70 LLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTMEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMLETEEAQATANEISRIIGGS-LTVEDEDAVLSELAEIE 183          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig88.68.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYA5_ECTSI1.120e-4577.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CK96_9STRA1.340e-2652.99Snf7-domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S2BZN2_9STRA1.720e-1848.67Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A484DZ78_BRELC2.170e-1849.57Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
H3H1K0_PHYRM2.640e-1844.03Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A5D6XUA9_9STRA5.230e-1847.24Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A4D9D5S7_9STRA5.300e-1848.18Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
W2QKK3_PHYPN7.570e-1846.96Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A6G0XQ97_9STRA1.160e-1743.97Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A3M6VKN6_9STRA1.390e-1746.96Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..245
NoneNo IPR availablePANTHERPTHR22761:SF5CHARGED MULTIVESICULAR BODY PROTEIN 6coord: 2..145
IPR005024Snf7 familyPFAMPF03357Snf7coord: 3..128
e-value: 4.1E-21
score: 75.3
IPR005024Snf7 familyPANTHERPTHR22761CHARGED MULTIVESICULAR BODY PROTEINcoord: 2..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig88contigA-nodosum_M_contig88:662288..677639 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig88.68.2mRNA_A-nodosum_M_contig88.68.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig88 661955..677684 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig88.68.2 ID=prot_A-nodosum_M_contig88.68.2|Name=mRNA_A-nodosum_M_contig88.68.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=246bp
MVKEGRKDRALLLLKVKKLKLEQANKADAQLLSVYQLMDTIDWETQQMKV
YYALKEGNQALTRLHEEMPLEKVEELMADTAENIAMEEEISKAIGGSSWS
QASERDLLAELAAIEEENQASLPESQAAAVYPKPDRKARPVAPAAAAAAA
PVAPEAKAPEADVAEADVAEADAAEAGAAEADVAEADVAEADAAEADAAE
AGAAEADAAEANRLEELLPEAPTKTPSAFEDEEVVESTTPALVPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam