prot_A-nodosum_M_contig88.60.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig88.60.2
Unique Nameprot_A-nodosum_M_contig88.60.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length332
Homology
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BLAST of mRNA_A-nodosum_M_contig88.60.2 vs. uniprot
Match: D7FY81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY81_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 4.300e-117
Identity = 197/348 (56.61%), Postives = 230/348 (66.09%), Query Frame = 0 
Query:    1 MFFKIVRAVEPFLKVFAHRVLSPWKGNHIVDSDLRRSIILWGFVSQQKILESVQPHRA------EGRVEKRAEQLNLDTVEFLRGTEQAYRCVASLFAPEP-----------ASSGAIETGSADQGSGSGSNSEALSDKGGGIGSGIAVDTAALKAEGSVQVASSSVLXXXXXXXXXXXESRTNFLDLDVASPEMSMFLNDVLESYRLQGLVPRLSISSVQASLCNVGIRLGGISKNTNFLGFISADEVKYHLTMGMLGPEGAVINELEGRAPQRVIADVKLTCKEEFLLEDEGGEVVHREATEEGPKIHFLTLQSNVGDGRKLQWQITNINDVIKPNLAYYFARFGH 331
            MF + +RA EP LK  + RV SPWKGNH+   DL  +II WGFVSQQK+ ESV+P RA      +GRVEKRAE LNLDT EFLRG E AYRC A LFAP P           A++ A   G A      GS  E      GG                S  +                  + T+F D DVASPEMSMFLNDVLESYR QGLVPRLS++SV+A LC VG+RLGGISKNTNF G +SADE +YHLTMGMLGPEG +INELEGRAPQRVIADV+LTC+EEF++ED  G VVH+    +GPK+H++TLQSN+G   +L+WQITNINDVIKP   YYF+RFGH
Sbjct:    1 MFLRAIRAAEPTLKELSRRVFSPWKGNHVACGDLSSTIIPWGFVSQQKVSESVRPDRAGDGPGDDGRVEKRAEHLNLDTWEFLRGAELAYRCAAGLFAPPPHKRKDPXXFEEAATAAPAFGQA------GSRGEC-----GGXXXXXXXXXXXXXXXXSANLGPDM----PPQRAQGGRTTPTDFFDFDVASPEMSMFLNDVLESYRAQGLVPRLSVASVEAKLCKVGVRLGGISKNTNF-GMMSADEARYHLTMGMLGPEGVLINELEGRAPQRVIADVELTCEEEFVVEDGKGNVVHK-LESQGPKVHYITLQSNIGKDAELEWQITNINDVIKPTFNYYFSRFGH 331
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BLAST of mRNA_A-nodosum_M_contig88.60.2 vs. uniprot
Match: W7TAG0_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAG0_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.520e-18
Identity = 58/176 (32.95%), Postives = 97/176 (55.11%), Query Frame = 0 
Query:  167 NFLDLDVASPEMSMFLNDVLESYRLQGLVPRLSISSVQASLCNVGIRLGGISKNTNFL-GFISADEVKYHLTMGMLGPEGAVINELEGRAPQRVIADVKLTCKEEFLLEDEGGEVVHR------EATEEG----------PKIHFLTLQSNV-GDGRKLQWQITNINDVI-KPNLA 323
            +F + +  +P++S FL D+  SY   G+ P L + SV+A L  + +  G +SKNT  L G +   E   H+  G++GPEG ++ ELEG  P+R++A+V+L+ +E F  +        R      +  E+G           + H+ T +S+  GD  +L+W ++NINDVI  P+L+
Sbjct:  124 DFTNSNYCTPDLSCFLEDIKRSYTEWGVKPCLHVESVRAKLRCLRVEEGLLSKNTYALFGTMGRYEALTHIWEGVIGPEGRLLQELEGNVPRRLVAEVELSVEESFWFQSRPATAWPRVGNNAEQDLEQGLTGGKQGEMKKRTHYFTFESDYFGDEGQLEWVVSNINDVIASPSLS 299
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig88.60.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FY81_ECTSI4.300e-11756.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TAG0_9STRA4.520e-1832.95Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig88contigA-nodosum_M_contig88:582626..601551 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig88.60.2mRNA_A-nodosum_M_contig88.60.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig88 582095..601739 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig88.60.2 ID=prot_A-nodosum_M_contig88.60.2|Name=mRNA_A-nodosum_M_contig88.60.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=332bp
MFFKIVRAVEPFLKVFAHRVLSPWKGNHIVDSDLRRSIILWGFVSQQKIL
ESVQPHRAEGRVEKRAEQLNLDTVEFLRGTEQAYRCVASLFAPEPASSGA
IETGSADQGSGSGSNSEALSDKGGGIGSGIAVDTAALKAEGSVQVASSSV
LGGGGGGKKPPEESRTNFLDLDVASPEMSMFLNDVLESYRLQGLVPRLSI
SSVQASLCNVGIRLGGISKNTNFLGFISADEVKYHLTMGMLGPEGAVINE
LEGRAPQRVIADVKLTCKEEFLLEDEGGEVVHREATEEGPKIHFLTLQSN
VGDGRKLQWQITNINDVIKPNLAYYFARFGH*
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