prot_A-nodosum_M_contig88.57.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig88.57.3
Unique Nameprot_A-nodosum_M_contig88.57.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length937
Homology
BLAST of mRNA_A-nodosum_M_contig88.57.3 vs. uniprot
Match: D8LNI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI0_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.610e-39
Identity = 101/214 (47.20%), Postives = 131/214 (61.21%), Query Frame = 0
Query:  745 APPMEGEGQAETHIMAGQAVHLKCSHCRTRFSRAGCSTASCLDCCFKAAVPCAAHAKQLERKRLEEELLAAGPSRE---ERRRLAKGVFKEEAIHAIGDTATLWCFGDFLCARSNQGAFKTLSRKQRAVTGR---RARLSTGRLVASSKIRASLTALRG-------------------PAGGLGESSRRR--VRPSIARWRRKSAEMLAAVASG 931
            APP   E +  T++  G  + ++C  C+TR  RAGC+T SCLDCCFK+A+PC AHAKQL+RKRLEEELL+AGPS+    E++R  K +FKEE+ HAIGDTAT+WCF DFLCA+SNQ AF +LSR QRA  GR   R+R ++                                     P   +   +RRR  VRP++ARW+RK+AEML A+  G
Sbjct:  361 APPQPQE-ELPTYVRIGGVMQVRCKICKTRLGRAGCTTGSCLDCCFKSALPCGAHAKQLQRKRLEEELLSAGPSQSQIREKQRNIKDIFKEESFHAIGDTATVWCFLDFLCAKSNQAAFTSLSRTQRATAGRDAPRSRRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDPESAVDGKARRRPRVRPAVARWQRKNAEMLTALREG 573          
BLAST of mRNA_A-nodosum_M_contig88.57.3 vs. uniprot
Match: A0A6H5JZT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT8_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 3.180e-28
Identity = 87/181 (48.07%), Postives = 110/181 (60.77%), Query Frame = 0
Query:  779 GCSTASCLDCCFKAAVPCAAHAKQLERKRLEEELLAAGPSRE---ERRRLAKGVFKEEAIHAIGDTATLWCFGDFLCARSNQGAFKTLSRKQRAVTGR---RARLSTGRLVASSKIRASLTAL--------------------RGPAGGLGESSRRRVR--PSIARWRRKSAEMLAAVASG 931
            GC+T SCLDCCFK+A+PCAAHAKQL+RKRLEEELL+A PS+    E++R  K  FKEE+ HAIGDT T+WCF DF+ A+SNQ AF +LSR QRA  GR   R+R ++              AL                      P   +G  +R RVR   ++ARW+RK+AEML A+  G
Sbjct:  796 GCTTGSCLDCCFKSALPCAAHAKQLQRKRLEEELLSAKPSQSQIREKQRNIKDTFKEESFHAIGDTVTVWCFLDFVRAKSNQAAFTSLSRTQRATAGRDASRSRRASXXXXXXXXXXXXDDALPPXXXXXXXXXXXXXXXXXXXDPESAVGGKARVRVRVRQAVARWQRKNAEMLTALREG 976          
BLAST of mRNA_A-nodosum_M_contig88.57.3 vs. uniprot
Match: D8LL83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL83_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 9.970e-14
Identity = 54/137 (39.42%), Postives = 68/137 (49.64%), Query Frame = 0
Query:  767 KCSHCRTRFSRAGCSTASCLDCCFKAAVPCAAHAKQLERKRLEEELL----------------------------AAGPSREERRRLAKGVFKEEAIHAIGDTATLWCFGDFLCARSNQGAFKTLSRKQRAVTGRRA 875
            +C  C  R ++ GCS+ SC +CC K+  PC AHAKQ+ERK  E+ELL                            A       R RL  G FKE A  A G+TATLWC  DF+C +  Q A +TL+R +R   GR A
Sbjct:  374 RCGLCG-RKAKLGCSSESCFECCLKSGKPCEAHAKQVERKHREDELLLGRXXXXXXXXXXXXGSCGLMSPGLPGGAFDDGAAPRARLPPGAFKEAAFQATGETATLWCLKDFVCGKDTQTAMETLNRTERQKAGRSA 509          
BLAST of mRNA_A-nodosum_M_contig88.57.3 vs. uniprot
Match: A0A6H5JLF6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLF6_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 8.090e-10
Identity = 47/120 (39.17%), Postives = 58/120 (48.33%), Query Frame = 0
Query:  778 AGCSTASCLDCCFKAAVPCAAHAKQLERKRLEEELL------------------------------AAGPSREERRRLAKGVFKEEAIHAIGDTATLWCFGDFLCARSNQGAFKTLSRKQ 867
            AGCS+ SC +CC K+  PC AHAKQ+ERK  E+ELL                              A       R RL  G FKE A    G+TATLWC  DF+C +  Q A +TL+R +
Sbjct:  637 AGCSSESCFECCLKSGKPCEAHAKQVERKHREDELLLGRXXXXXXXXXXXXXXXXGGLMSPGLPGGAFDDGTAPRARLPPGAFKEAAFQ--GETATLWCLKDFVCGKDTQTAMETLNRTE 754          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig88.57.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNI0_ECTSI2.610e-3947.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZT8_9PHAE3.180e-2848.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL83_ECTSI9.970e-1439.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLF6_9PHAE8.090e-1039.17Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 604..634
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig88contigA-nodosum_M_contig88:534660..542179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig88.57.3mRNA_A-nodosum_M_contig88.57.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig88 534578..543583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig88.57.3 ID=prot_A-nodosum_M_contig88.57.3|Name=mRNA_A-nodosum_M_contig88.57.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=937bp
MPQQYPQVVSPVSLTPPMKTRRGRPMDAQDGASSNTTGTTISTTGSSHNN
SPKNRRARRNASPTRPVPAKRSTLDSWFLRDSLTPASVRSEGSRSPLRSL
SPDAPVVGKTGRVYGVGRVPSPENGRKGRVVELSGSPSSSLSSRVPTSGS
AAVATVTPPGLKSSCGGGDVRSLTDLSTTPPPRGNRLARRSRRRTVSASF
EQGSSRALTGSPEGSTISASTSRRRSSKRCPTSAPVPAISGGSAKIKSDP
AKGRDTFTRSAKAPRTSTAANDSANPKRSTNIQAGSFPTARTEGEASAKN
LVMATPDDPLAPSASPAAEPGPRGRPAKKRASLFGSTPPPCTSGHAAHDS
ANPKRSTNIQAGSFPTARTEGEASAKNLVTTTPDNPLAPSASPAADPGPR
GRPAKKRASLFGSTPPPCTSGPAVRSPRNVCHVSTVTGCSGVSSCASGVP
VVEKMRHDGHASSGKPALARTPSSKAAAPRKRKSIAKPTVRRSGPLVVGA
GGGMGWKKKDTSDEMKKVGAKLKGKLGQPSASSMPSTKGIGDGAASAGEA
FEVGAPAGENGSVQAFGMRPTVTGIGVAGRENEDVPPKKRKVAASLDEEQ
YVTKETCRARSAGGEGTSKSDGGDDAGVALAGDPRRLEAAPLGAATLTEA
GTRDVFDAPLLPVATASAGTTSASASQSTLADSPTVTPLGRAALTLTGVP
STTSHIEGEQKILERLGRSVTAAVDSRGWTPPGTAGETVAMASKAPPMEG
EGQAETHIMAGQAVHLKCSHCRTRFSRAGCSTASCLDCCFKAAVPCAAHA
KQLERKRLEEELLAAGPSREERRRLAKGVFKEEAIHAIGDTATLWCFGDF
LCARSNQGAFKTLSRKQRAVTGRRARLSTGRLVASSKIRASLTALRGPAG
GLGESSRRRVRPSIARWRRKSAEMLAAVASGSAPFS*
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