mRNA_A-nodosum_M_contig88.57.3 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_A-nodosum_M_contig88.57.3
Unique Name	mRNA_A-nodosum_M_contig88.57.3
Type	mRNA
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))

Homology

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BLAST of mRNA_A-nodosum_M_contig88.57.3 vs. uniprot
Match: D8LNI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI0_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 1.750e-39
Identity = 101/214 (47.20%), Postives = 131/214 (61.21%), Query Frame = 2

Query: 2315 APPMEGEGQAETHIMAGQAVHLKCSHCRTRFSRAGCSTASCLDCCFKAAVPCAAHAKQLERKRLEEELLAAGPSRE---ERRRLAKGVFKEEAIHAIGDTATLWCFGDFLCARSNQGAFKTLSRKQRAVTGR---RARLSTGRLVASSKIRASLTALRG-------------------PAGGLGESSRRR--VRPSIARWRRKSAEMLAAVASG 2875
            APP   E +  T++  G  + ++C  C+TR  RAGC+T SCLDCCFK+A+PC AHAKQL+RKRLEEELL+AGPS+    E++R  K +FKEE+ HAIGDTAT+WCF DFLCA+SNQ AF +LSR QRA  GR   R+R ++                                     P   +   +RRR  VRP++ARW+RK+AEML A+  G
Sbjct:  361 APPQPQE-ELPTYVRIGGVMQVRCKICKTRLGRAGCTTGSCLDCCFKSALPCGAHAKQLQRKRLEEELLSAGPSQSQIREKQRNIKDIFKEESFHAIGDTATVWCFLDFLCAKSNQAAFTSLSRTQRATAGRDAPRSRRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDPESAVDGKARRRPRVRPAVARWQRKNAEMLTALREG 573

[Close]

BLAST of mRNA_A-nodosum_M_contig88.57.3 vs. uniprot
Match: A0A6H5JZT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT8_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 2.520e-28
Identity = 87/181 (48.07%), Postives = 110/181 (60.77%), Query Frame = 2

Query: 2417 GCSTASCLDCCFKAAVPCAAHAKQLERKRLEEELLAAGPSRE---ERRRLAKGVFKEEAIHAIGDTATLWCFGDFLCARSNQGAFKTLSRKQRAVTGR---RARLSTGRLVASSKIRASLTAL--------------------RGPAGGLGESSRRRVR--PSIARWRRKSAEMLAAVASG 2875
            GC+T SCLDCCFK+A+PCAAHAKQL+RKRLEEELL+A PS+    E++R  K  FKEE+ HAIGDT T+WCF DF+ A+SNQ AF +LSR QRA  GR   R+R ++              AL                      P   +G  +R RVR   ++ARW+RK+AEML A+  G
Sbjct:  796 GCTTGSCLDCCFKSALPCAAHAKQLQRKRLEEELLSAKPSQSQIREKQRNIKDTFKEESFHAIGDTVTVWCFLDFVRAKSNQAAFTSLSRTQRATAGRDASRSRRASXXXXXXXXXXXXDDALPPXXXXXXXXXXXXXXXXXXXDPESAVGGKARVRVRVRQAVARWQRKNAEMLTALREG 976

[Close]

BLAST of mRNA_A-nodosum_M_contig88.57.3 vs. uniprot
Match: D8LL83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL83_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.830e-13
Identity = 54/137 (39.42%), Postives = 68/137 (49.64%), Query Frame = 2

Query: 2381 KCSHCRTRFSRAGCSTASCLDCCFKAAVPCAAHAKQLERKRLEEELL----------------------------AAGPSREERRRLAKGVFKEEAIHAIGDTATLWCFGDFLCARSNQGAFKTLSRKQRAVTGRRA 2707
            +C  C  R ++ GCS+ SC +CC K+  PC AHAKQ+ERK  E+ELL                            A       R RL  G FKE A  A G+TATLWC  DF+C +  Q A +TL+R +R   GR A
Sbjct:  374 RCGLCG-RKAKLGCSSESCFECCLKSGKPCEAHAKQVERKHREDELLLGRXXXXXXXXXXXXGSCGLMSPGLPGGAFDDGAAPRARLPPGAFKEAAFQATGETATLWCLKDFVCGKDTQTAMETLNRTERQKAGRSA 509

[Close]

BLAST of mRNA_A-nodosum_M_contig88.57.3 vs. uniprot
Match: A0A6H5JLF6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLF6_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 1.440e-9
Identity = 47/120 (39.17%), Postives = 58/120 (48.33%), Query Frame = 2

Query: 2414 AGCSTASCLDCCFKAAVPCAAHAKQLERKRLEEELL------------------------------AAGPSREERRRLAKGVFKEEAIHAIGDTATLWCFGDFLCARSNQGAFKTLSRKQ 2683
            AGCS+ SC +CC K+  PC AHAKQ+ERK  E+ELL                              A       R RL  G FKE A    G+TATLWC  DF+C +  Q A +TL+R +
Sbjct:  637 AGCSSESCFECCLKSGKPCEAHAKQVERKHREDELLLGRXXXXXXXXXXXXXXXXGGLMSPGLPGGAFDDGTAPRARLPPGAFKEAAFQ--GETATLWCLKDFVCGKDTQTAMETLNRTE 754

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig88.57.3 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig88.57.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D8LNI0_ECTSI	1.750e-39	47.20	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JZT8_9PHAE	2.520e-28	48.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LL83_ECTSI	1.830e-13	39.42	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JLF6_9PHAE	1.440e-9	39.17	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig88	contig	A-nodosum_M_contig88:534578..543583 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	4297
Hectar predicted targeting category	other localisation
Exons	5
Cds size	2811

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig88.57.3	prot_A-nodosum_M_contig88.57.3	Ascophyllum nodosum dioecious	polypeptide	A-nodosum_M_contig88 534660..542179 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680870284.9917276-UTR-A-nodosum_M_contig88:534577..534659	1680870284.9917276-UTR-A-nodosum_M_contig88:534577..534659	Ascophyllum nodosum dioecious	UTR	A-nodosum_M_contig88 534578..534659 +
1680870285.0594378-UTR-A-nodosum_M_contig88:542179..543583	1680870285.0594378-UTR-A-nodosum_M_contig88:542179..543583	Ascophyllum nodosum dioecious	UTR	A-nodosum_M_contig88 542180..543583 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680870285.003069-CDS-A-nodosum_M_contig88:534659..536946	1680870285.003069-CDS-A-nodosum_M_contig88:534659..536946	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig88 534660..536946 +
1680870285.013576-CDS-A-nodosum_M_contig88:537252..537300	1680870285.013576-CDS-A-nodosum_M_contig88:537252..537300	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig88 537253..537300 +
1680870285.0275497-CDS-A-nodosum_M_contig88:537747..537921	1680870285.0275497-CDS-A-nodosum_M_contig88:537747..537921	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig88 537748..537921 +
1680870285.0378997-CDS-A-nodosum_M_contig88:541587..541679	1680870285.0378997-CDS-A-nodosum_M_contig88:541587..541679	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig88 541588..541679 +
1680870285.0478184-CDS-A-nodosum_M_contig88:541969..542179	1680870285.0478184-CDS-A-nodosum_M_contig88:541969..542179	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig88 541970..542179 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at A-nodosum_M_contig88:534578..543583+
coding sequence from alignment at A-nodosum_M_contig88:534578..543583+

protein sequence of mRNA_A-nodosum_M_contig88.57.3

>prot_A-nodosum_M_contig88.57.3 ID=prot_A-nodosum_M_contig88.57.3|Name=mRNA_A-nodosum_M_contig88.57.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=937bp
MPQQYPQVVSPVSLTPPMKTRRGRPMDAQDGASSNTTGTTISTTGSSHNN
SPKNRRARRNASPTRPVPAKRSTLDSWFLRDSLTPASVRSEGSRSPLRSL
SPDAPVVGKTGRVYGVGRVPSPENGRKGRVVELSGSPSSSLSSRVPTSGS
AAVATVTPPGLKSSCGGGDVRSLTDLSTTPPPRGNRLARRSRRRTVSASF
EQGSSRALTGSPEGSTISASTSRRRSSKRCPTSAPVPAISGGSAKIKSDP
AKGRDTFTRSAKAPRTSTAANDSANPKRSTNIQAGSFPTARTEGEASAKN
LVMATPDDPLAPSASPAAEPGPRGRPAKKRASLFGSTPPPCTSGHAAHDS
ANPKRSTNIQAGSFPTARTEGEASAKNLVTTTPDNPLAPSASPAADPGPR
GRPAKKRASLFGSTPPPCTSGPAVRSPRNVCHVSTVTGCSGVSSCASGVP
VVEKMRHDGHASSGKPALARTPSSKAAAPRKRKSIAKPTVRRSGPLVVGA
GGGMGWKKKDTSDEMKKVGAKLKGKLGQPSASSMPSTKGIGDGAASAGEA
FEVGAPAGENGSVQAFGMRPTVTGIGVAGRENEDVPPKKRKVAASLDEEQ
YVTKETCRARSAGGEGTSKSDGGDDAGVALAGDPRRLEAAPLGAATLTEA
GTRDVFDAPLLPVATASAGTTSASASQSTLADSPTVTPLGRAALTLTGVP
STTSHIEGEQKILERLGRSVTAAVDSRGWTPPGTAGETVAMASKAPPMEG
EGQAETHIMAGQAVHLKCSHCRTRFSRAGCSTASCLDCCFKAAVPCAAHA
KQLERKRLEEELLAAGPSREERRRLAKGVFKEEAIHAIGDTATLWCFGDF
LCARSNQGAFKTLSRKQRAVTGRRARLSTGRLVASSKIRASLTALRGPAG
GLGESSRRRVRPSIARWRRKSAEMLAAVASGSAPFS*

mRNA from alignment at A-nodosum_M_contig88:534578..543583+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_A-nodosum_M_contig88.57.3 ID=mRNA_A-nodosum_M_contig88.57.3|Name=mRNA_A-nodosum_M_contig88.57.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9006bp|location=Sequence derived from alignment at A-nodosum_M_contig88:534578..543583+ (Ascophyllum nodosum dioecious)
ATTTAAAGCCCTGCTGCACGTGAACTTTACCATTCCCTTGTGTTCTCCCA
GGTGTCACTCTGCCCGCTCTCGGAGACGAGTAATGCCTCAGCAGTATCCT
CAAGTCGTCTCCCCCGTGTCGTTAACACCACCTATGAAGACACGGCGTGG
TAGGCCCATGGATGCCCAAGACGGTGCCAGCTCTAACACCACTGGCACCA
CCATCAGCACCACGGGTAGTTCTCACAATAACTCCCCGAAGAATAGGAGG
GCTCGTCGCAATGCGTCTCCCACGAGACCGGTGCCGGCAAAGCGTAGTAC
GCTTGATTCCTGGTTCTTGCGTGATTCTCTCACCCCCGCTTCCGTACGGA
GCGAGGGATCCAGGTCTCCCTTGCGATCCCTGTCTCCGGATGCGCCTGTC
GTTGGTAAGACGGGCAGAGTCTATGGCGTAGGGCGAGTGCCGTCGCCGGA
AAACGGGCGGAAAGGGCGCGTTGTCGAGCTCAGCGGCAGCCCTTCCTCCT
CCCTGTCTTCGAGAGTACCTACTTCCGGCAGCGCTGCCGTTGCCACGGTC
ACACCTCCCGGACTCAAGAGTTCTTGTGGTGGTGGTGACGTTCGATCGCT
TACCGATTTATCAACCACGCCGCCGCCGAGGGGCAACAGGCTTGCACGTC
GATCACGGCGCAGGACTGTCTCCGCTTCTTTCGAGCAAGGCTCCTCAAGG
GCCTTGACGGGGAGTCCAGAGGGCAGCACCATCAGTGCCAGTACCAGCAG
AAGGCGCAGCAGTAAACGGTGCCCTACTTCTGCCCCAGTGCCTGCCATAT
CTGGAGGATCGGCCAAGATCAAGAGTGACCCCGCCAAGGGAAGGGACACC
TTCACGAGGAGCGCGAAGGCCCCCAGAACCAGCACCGCTGCCAATGACTC
GGCGAACCCGAAACGTAGTACAAATATCCAGGCCGGTTCTTTTCCGACGG
CGCGAACAGAGGGTGAGGCGAGCGCAAAGAACCTGGTGATGGCGACCCCT
GACGACCCTCTGGCGCCGTCTGCTTCTCCTGCCGCCGAGCCGGGACCCCG
CGGTAGACCTGCCAAAAAGCGTGCCTCCCTCTTTGGTAGCACCCCTCCTC
CATGTACGAGCGGGCACGCTGCCCATGACTCGGCGAACCCGAAACGTAGT
ACAAATATCCAGGCCGGTTCTTTCCCGACGGCGCGAACAGAGGGTGAGGC
GAGCGCAAAGAACCTGGTGACGACGACCCCTGACAACCCTCTGGCGCCGT
CTGCTTCTCCTGCCGCCGACCCGGGACCCCGCGGTAGACCTGCCAAAAAG
CGTGCCTCCCTCTTTGGTAGCACCCCTCCTCCATGTACGAGCGGACCGGC
AGTCAGGAGCCCCCGAAACGTATGCCATGTTTCTACGGTTACCGGTTGCT
CAGGGGTGTCCTCTTGTGCCTCCGGAGTTCCCGTGGTGGAAAAAATGAGG
CACGATGGGCACGCCTCCTCTGGCAAGCCGGCTCTTGCGCGGACTCCGAG
CTCTAAGGCCGCTGCTCCAAGGAAGCGAAAGTCGATCGCTAAACCGACGG
TCCGCAGGAGCGGTCCGCTGGTTGTAGGAGCCGGCGGCGGAATGGGCTGG
AAGAAGAAGGACACGAGTGACGAAATGAAAAAAGTCGGAGCTAAGCTGAA
AGGTAAGTTAGGACAGCCTTCGGCTTCATCTATGCCGAGTACCAAGGGGA
TCGGGGACGGGGCTGCCTCAGCGGGCGAGGCATTCGAGGTAGGAGCGCCC
GCGGGGGAAAACGGCAGCGTGCAGGCATTTGGTATGCGCCCGACGGTAAC
CGGGATCGGTGTAGCAGGGAGGGAGAACGAGGACGTTCCGCCGAAGAAGC
GGAAGGTCGCCGCCTCGTTGGACGAAGAGCAATACGTCACCAAGGAGACG
TGCCGAGCCAGAAGCGCTGGCGGTGAGGGCACGAGCAAGAGTGACGGGGG
CGATGACGCAGGTGTCGCGCTCGCCGGCGACCCAAGGAGACTGGAAGCGG
CCCCTCTCGGCGCTGCTACTCTAACGGAAGCGGGGACTCGTGACGTATTC
GACGCACCGCTATTACCTGTAGCGACAGCGTCAGCCGGAACAACCTCAGC
TTCAGCATCGCAGTCGACGCTGGCAGACTCCCCAACCGTGACGCCCTTGG
GACGAGCCGCTCTTACGCTCACTGGTGTGCCTAGCACGACATCCCACATC
GAGGGAGAGCAGAAGATATTGGAGAGGCTGGGGAGAAGCGTCACCGCCGC
CGTAGATAGTCGTGGTTGGACGCCACCGGGAACTGCAGGCGAGACCGTGG
CGATGGCTTCGAAGGCGCCGCCGATGGAGGGAGAGGGGCAAGCTGAGACG
CACATCATGGCTGGGCAAGGTAAGAGCAATCGAAGTCTAATGGAATTGTT
GGTTTGCTTGCGCGCAACGGCTCCGAAAGCCGCACAGAAGAGCTAACTCT
GTAGCCGTCGTAGAAAGTGCCTGTCAGGTGGGTAACAAATGCACTGTTGT
ATTTTGTGCCACTGAGGCGCAAGAGACCTTGTCTCTCACCGTGCGTGTTT
TTGTGTCCTGAAGCGACGCGGCTTTACCTAATACTCGTCCGACCCGACAA
CGCTCTCCTATGTCGCGTTCCTCTCGTTGTCGCGCGCAAATCAAACCAAA
CCAAACCGCCTTGCCACGTCGTCAGCGGTGCACTTGAAGTGTAGTCACTG
TAGGACTCGTTTCTCGAGGGCAGGTGAGTTCTGGGAAGTATTCTGTACGA
TACGGCGGCGTGCCGTGGTAAGGGGGGGTAGAGCTAAAATCCCCCCGCTT
GTGTCCGCGTCACGCACCTTGTGATACGGTTCCGTGTCGCGATAATCTTT
AATTAGGTAGGCAGGGACGCGCGCAACCCTCATGAGCTGACGCGCGGTAA
CGCATTTTTTTTTTTTAATGGATGAGCTCTCTCTTGTAGCGTGAACAAAA
ACAGGTTATTGGGTGCGTGGAAGTGGGCATATTTTTGTTTTGGAGCTCTC
TCTTGTAGCGCGAACAAAAACAGTTTGTTGTACGAGTGGAAGTGTGCATA
TTTTTGTTTTGGTTTATAGAACAATCCGAAGGCACAAAGTTGGTAAATAT
AAAGGTGCCTTCTTTTTTATGTTTGTGTGTGTACCCTCTCGCTGAAAACG
TCCTCCGCCCCACGATGCAGGGTGCTCTACAGCCAGCTGCCTCGACTGTT
GCTTCAAGGCCGCTGTGCCCTGCGCAGCGCACGCGAAGCAACTAGAGCGT
AAACGCCTCGAGGAGGAACTCCTTGCCGCAGGACCCAGCCGTGAGGAGCG
CAGGCGATTGGCCAAAGGTGTCTTCAAGGAGGAGGCAATCCACGGTGAGA
CGACGACTTCTATGCGATTTTATTTTTTAATTTTTTAGAGTGCTCTCTCT
CTCTGTACCAGAGGTGAGTAGCTGTGTGAAAAAAACACTCTCTTCTTTCC
TGACGTAATCCAAATGTCTCTTCGTAAGGGACCCTATCGTAGATGAACAT
TTCTTAGATCGGGTTTCCACCCCGCGGTGTCCAATCGTGGAGATGGGAGG
AGGGGGATGGTCGGGGTGCGAGGCGTTTCCACTCTTGTAGAACTTCGCCC
CATTTATGGTCTGAGGGTGCTGTAACAATGACGTCAGCGAGATCTCCCCT
CTTACGAGAACTGGGGAAAAAGTGTAAAGAGAGTATCGTATACCTTTGAT
CGGACGCCGCTGGGCAGGCATCACTCCGCGAGGCACGTTTTTATCACAAG
TATGCATCGGCCTTGGACACACCTGCCCGAATTGCGCTAACATCGTCTCG
TATGAGGCACTGTGAAGTGCGACGGCTGTGTTTAGCTTGACTCGCTTGGA
TGTATGATGAATACTGCACCAATCTATCGATGGCCGGGTGGGTCCATACG
TGACAGGTCGGTGTATCAACGATGTGTGGTGCAGGGCAGGTATCTACTGT
CGTAGTGGTCCCTAGAGCGACGTGCACGCCAAAACACGCGATAAACATTT
CCACCACTCTCCATATTTTGTTTACTATGCATCGGCTTTCCATACGACAT
ATCTAGAGCACACCGCTACATCCATTCTTGAAACCGAACACCAAAAAATA
GCGGGAATATTTTTGATCATTGGTTGAGCCGGTTTCCAACCTTCAGTAGT
AAGAACTTCCATCGGCCCTTCACACCAGTTCAAAACCTTTGCCTTTGGGA
CCCTATCGTAGATGAACATTTCTTAGATCGGGTTTCCACCCTGCGGCGTC
CAATCTTGGAGATGGGAGGAGGGGGATGGCTGGGCTGCGAGGCGTTTCCA
CTCTTGTAGAACTCCGCCGCATTTACGGTTTGAGGGTGCTGTAATAACGA
CGTCAGCGAGATCTCCCCTCGTACGAGAGCTGGGGAAAACATGTAAAGAG
AGTATCATAATTTATACCTTTGATCGGACACCGCCGGGCAGGCATTACTC
CGCGAGGCACGTTTTTATCTAAGTATGCATCGGCCTTGAACACACCTGCC
CGAATTGCGTTAACATCATCTCGTATGAGGCACTGAAAAGTGCGACGGCT
GTGTTTAACTTGACTCGCTTGGATATATGATTCAATATAAATCGATGGCC
GGCTGGGTCCATACCTGGTACGTGACAGGCCGATGTATCAACGATGTGTG
GTGCAGGGCAGGTATCTACTGTCGTAGTGGTCCCTAGAGCGACGTGCACG
CCAAAACACGCGAGAAACATTTCCACCACTTTCCATATTTTGTTTACTAT
GCAGCGGCTTTCCATACGACATATCTAGAGGACACCGCTACATCCATTCT
TGAAACCGAACACCAAAAAATAGCGGGAATATTTTTGATCGTCGGTTGAG
CCGGTTTCCAACTTTCAGTAGTAAGAGCTTACATCGGCCCTTCACACCAG
TTCAAAATCTTATAGTAAAAACTTTTGCCGTTGGGACCCTATCGTAGATG
AACATTTCTTAGATCGGGCTTCCACCCTGCGGCGTCCAATCGTGGAGATG
GGAGGAGGGGGATGGCCTGGCTGCGAGGCGTTTCCACTCTTGTAGAACTC
CGCCGCATTTACGGTTTGAGGGTGCTGTAATAACGACGTCAGCGAGATCT
CCCCTCTTACGAGAGCTGGGGAAAAAGTGTTAAGAGAGTATCGTATACCT
TTGATCGGACGCCGCCGAGCAAGCATTACTCCGCGAGGCACGTTTTTATC
TCAAGTATGCGTCGACCTTGGACACACCTGCCCGAATTGCGTTAACATCA
TCTCGTATGAGGGAGGCACTGAGAAGTGCGACGGCTGTGTTTAGCTTGAC
TCGCTTGGATGATACTGTCCCAATATATATCGATGGCCGGCTGGGTCCAT
ACGTGACAGGCCGATGTATCAACGATGTGTGGTGCAGGGCAGGTATCTAC
TGTCGTAGTGGTCCCTAGAGCGACGTGCACGCCAAAACACGCGATTAACA
TTTCCACCACTTTCCATATTTTGTTTACTATGCATCGGCTTTTCATACGA
CATATCTAGAGCAAACCGCTACATCCATTCTTGAAACCAAACACCAAAAA
ATAGCGGGAATATTTTTTATCGTCAGTTGAGCCGGTTTCCAACCTTAAGT
AGTAAGAACTTCCATCGGCCCTTCACATCAGTTCAAAATCTTATAGTAAA
AACCTTTGCCTTTGGGACCCTAACGTAGATGAACATTTCTTAGATCGGGT
TTCCACCCTGCGGCGTCCAATCGTGGAGATGGGAGGAGAGGGATGGCATG
GCTGCGAGGCGTTTCCACTCTTGTAGAACTTCGCCGCATTTACGGTTTGA
GGGTGCTGTAATAACGACGTCAGCGAGATCTCCCCTCTTACGAGAGCTGG
GGGAAAAGTGTAGAGAGAGTATCGTATACCTTAGTTCGGACGCCGCCGGG
CAAGCATTACTCCGCGAGGCACGTTTTTATCTCAAGTATGCATCGGCCTT
GGACACACCTGCCCGAATTGCGTTAACATCATCTCGTATGAGGCCCTGAG
AAGTGCGACGGCTGTGTATTGGCTTGACTCGCTTGGATATATGATTAATA
CTGGACCAATATATATCGATGGCCGGCTGGGTCCATACGTGACAGGTCGG
TGTATCAACGATGAGTGGTGCAGGGCAGGTATCTACTGTCGTAGTGGTCC
CTAGAGCGACGTGCACGCCAAAACACGCGAGAAACATAGCTCTCTAGTAA
TTACCGGTGTCTCGTACTGGCTGGATTATGTCGAAGATATCTACGAAGGT
GGCCTGGCCCTCTCTACCCCTGTTTCAATCCTTAACACAAACCCTATGTA
TTTACCACTACCACTAGGTGTCCTATACCTTAACCAAAATGTACCACTCT
TAATCAGTTGTACTATCATAGCGTTCCTTGTGTTCTAGACTATTATATTA
GCCCCTATTGCTGTATGGTGCGATGGCCCTAATATTATCCTATATTATAA
CTATCCTATCTAATTATGTACTCCGTTGTTTTTGGTTTGTTAAAGTTTTT
TTGGTGTCCCTGCATGGCGATTAATGTAAGTGTACAGTATAACGGTGGGC
TTCTTCCCGACATTATACTGTTGACCCAATGTTATTACCATCGGGGAACC
CGTTTAAATGCCATGAAGAGGTTTTGTCATTGCAGCCTATGATCCCACCT
AAGCGTTTTGACATTTTCTTCCTTGTGTGGGATGCTCAGAAGGTCTAGAT
GCGTTCAGATTTTTCTTTAAACACGAGAAACATTTCCGCCACTTGTGCCA
CATTTTGTTTGCGATGCATCGGCTTTCCAGACGACATATCGAGAGCACAC
CGATATATCCATTCTTGAAACCAAACACCAAAAAATAGCGGGAACATCTC
TCTTCATCGGTTGAGCCGGTTTCCAACCTTCAGTAGTAAGAACTTCCACC
GGCCCTTCACACCACTTCACAACCCTATAGTAAAACCTTTGTCTTTCCCC
CCTCCTCCTATACATAAATGACCCTCGAACGCCTCTATCTTTTTCTCGGA
CGTCCCTCAGCCATCGGAGACACAGCCACGCTTTGGTGCTTCGGGGACTT
CCTGTGCGCCAGGTCGAACCAGGGGGCGTTCAAGACCCTCTCCCGGAAGC
AGGTTAACAGCGTGCGGCGCGTGTCCATTGTTGTGTGTGTGTGTATGTAT
CTTTTCCCCGCGCATGCGTCCTTCTGCTCTCCTTCGCGGTCAACACCCCC
CCCCGGCTATTAATCCACACACCCTACCGCAAGCTCGGTACAGAAGCATC
TAATGCTATGTAGTATATCTCTACGCTGATAATTTTTGCCCTCTCCCCCC
TCCCGTCCTCGGAAGGAACCCTCTCATTTCCTTTCCTTGTGTCTGTTCGA
CTTCGCTCGTTTCTTTCTTTCTTCTTTTGCATCGCACCACAGCGCGCGGT
CACGGGTCGCAGGGCTCGCCTCTCGACCGGGAGGTTGGTGGCATCGTCAA
AGATCCGAGCTTCCCTTACCGCTCTCCGTGGCCCTGCGGGAGGGCTGGGT
GAGAGTAGTCGCCGCCGCGTGCGCCCTTCGATTGCGCGCTGGCGTCGCAA
AAGCGCGGAGATGCTCGCGGCGGTCGCTTCCGGTTCGGCGCCGTTTTCCT
AATTCTTTTTTGAATCTCCCCCTCTCTCTCTCGTTAGCGTTTTAATCGTT
CTCCCGCAGTCGGTAGGTACTGTATCACGTCTCTTGTCGTTTGAGAACAC
GCGTCGCGTGTTCTTTCCCCGAATCACGCACCCAGTAGAGCCTAGTGTGT
TTTAACATAATCACGCCTACGGAGCGTTATGGCGCACGCGATTTTCCATG
GAAATGCCGTGGGGTAGACTAGAGGGTAGAAAGCTTTCGTCGCGCATGAG
CGACTACGACGCGGGTCCTGTAGAAGCAACACAGCACCTATAGGGGTTTA
GGGGGTCTACTACAGAGGTATTGGGCACGGCAGGTTCGTGCCTCACACGT
CTCGGTTCTGTTGCTCCGGAAAATGTTGTTTTGATTGGGTGGTACACCAC
ACGGTACGGTCTCGATTAAATGAGGCGTTTGGTGGGGGGGGGGGGTAAGT
GAAGAAATATGGTTTCAAGCGTAACTTCGTCCCGTAGCTTGCGATCAGTG
AAAAAAACTCGTGATGGGGCAAGGAGGCTGCCCTTGACATTATGGGTACA
GGACAGACTCTTAAAGTTTTTCAACACAGTCGGGATTAGGGAATGAAGGT
GCGATGCTCACAAGGTGCACCTCGTTTTTCGCGCCACGTGAGTTGTGGTT
ATCGTTTGGTAGTTCAGCCTCCTCCTCCGGTGGCTGGCAGAGTAGTAACA
AAAGCATCATGGAGGCCTGATGTTATAGGGGGATAGGAGTAGCAAAAGGG
ATGATGCATAATAGTTCGCCGCCCAGTCAAGTATTTATTCCGAGTGCTGC
GTGGAATAAGGGGCCTGGATCGATCGATGCCTTGACGGATATGATGTCGT
TACTGCTGTACTATCATAGCAGACAGTGTACGATCCTGATGATTATCGCA
GGCGACGTTCGATCGGGTTATGTGCTTTTATTTCTCTTGAGTCTTGTTTT
TGTTGTGTTGTGTTGGGGGTTGTGTTCTCTAAGGAACTAAGGTCATCAGT
GAAATGGGAGTTCTTTTGTAACCAGCTATCGTACACAGCTGTAGTGTGTA
TGGTCCAGCTATATAGTCGCTATCATCACCTGGTTAACACAAAAAGGTAA
ATACACGTACTAATGTACCATGTATCTATGGAGCTTCCATAGAGAAAGAA
AGGAAATAGCAGGCAATTTTGTTTTGGTGAAAATTCTCCACAGAGATTAT
ATTTATCGTTGTACTGCAAGTCGTACTTTTTTGTTTGTTTGCAAAACCCT
GTCAAAACGTCGAAGCGCCATGCTGCTCGTAGATTTTATGGCGGTAGTGT
TTCGTACGTGGTACACTCTTGAGACTATAATATGTCTTCCCCTGGGGCAT
GATGCGGAACATTCGGAGGTGCAGAGTTTTGAAAAAAATACCAGAACCAA
TGTGTC

Coding sequence (CDS) from alignment at A-nodosum_M_contig88:534578..543583+

>mRNA_A-nodosum_M_contig88.57.3 ID=mRNA_A-nodosum_M_contig88.57.3|Name=mRNA_A-nodosum_M_contig88.57.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=2811bp|location=Sequence derived from alignment at A-nodosum_M_contig88:534578..543583+ (Ascophyllum nodosum dioecious)
ATGCCTCAGCAGTATCCTCAAGTCGTCTCCCCCGTGTCGTTAACACCACC
TATGAAGACACGGCGTGGTAGGCCCATGGATGCCCAAGACGGTGCCAGCT
CTAACACCACTGGCACCACCATCAGCACCACGGGTAGTTCTCACAATAAC
TCCCCGAAGAATAGGAGGGCTCGTCGCAATGCGTCTCCCACGAGACCGGT
GCCGGCAAAGCGTAGTACGCTTGATTCCTGGTTCTTGCGTGATTCTCTCA
CCCCCGCTTCCGTACGGAGCGAGGGATCCAGGTCTCCCTTGCGATCCCTG
TCTCCGGATGCGCCTGTCGTTGGTAAGACGGGCAGAGTCTATGGCGTAGG
GCGAGTGCCGTCGCCGGAAAACGGGCGGAAAGGGCGCGTTGTCGAGCTCA
GCGGCAGCCCTTCCTCCTCCCTGTCTTCGAGAGTACCTACTTCCGGCAGC
GCTGCCGTTGCCACGGTCACACCTCCCGGACTCAAGAGTTCTTGTGGTGG
TGGTGACGTTCGATCGCTTACCGATTTATCAACCACGCCGCCGCCGAGGG
GCAACAGGCTTGCACGTCGATCACGGCGCAGGACTGTCTCCGCTTCTTTC
GAGCAAGGCTCCTCAAGGGCCTTGACGGGGAGTCCAGAGGGCAGCACCAT
CAGTGCCAGTACCAGCAGAAGGCGCAGCAGTAAACGGTGCCCTACTTCTG
CCCCAGTGCCTGCCATATCTGGAGGATCGGCCAAGATCAAGAGTGACCCC
GCCAAGGGAAGGGACACCTTCACGAGGAGCGCGAAGGCCCCCAGAACCAG
CACCGCTGCCAATGACTCGGCGAACCCGAAACGTAGTACAAATATCCAGG
CCGGTTCTTTTCCGACGGCGCGAACAGAGGGTGAGGCGAGCGCAAAGAAC
CTGGTGATGGCGACCCCTGACGACCCTCTGGCGCCGTCTGCTTCTCCTGC
CGCCGAGCCGGGACCCCGCGGTAGACCTGCCAAAAAGCGTGCCTCCCTCT
TTGGTAGCACCCCTCCTCCATGTACGAGCGGGCACGCTGCCCATGACTCG
GCGAACCCGAAACGTAGTACAAATATCCAGGCCGGTTCTTTCCCGACGGC
GCGAACAGAGGGTGAGGCGAGCGCAAAGAACCTGGTGACGACGACCCCTG
ACAACCCTCTGGCGCCGTCTGCTTCTCCTGCCGCCGACCCGGGACCCCGC
GGTAGACCTGCCAAAAAGCGTGCCTCCCTCTTTGGTAGCACCCCTCCTCC
ATGTACGAGCGGACCGGCAGTCAGGAGCCCCCGAAACGTATGCCATGTTT
CTACGGTTACCGGTTGCTCAGGGGTGTCCTCTTGTGCCTCCGGAGTTCCC
GTGGTGGAAAAAATGAGGCACGATGGGCACGCCTCCTCTGGCAAGCCGGC
TCTTGCGCGGACTCCGAGCTCTAAGGCCGCTGCTCCAAGGAAGCGAAAGT
CGATCGCTAAACCGACGGTCCGCAGGAGCGGTCCGCTGGTTGTAGGAGCC
GGCGGCGGAATGGGCTGGAAGAAGAAGGACACGAGTGACGAAATGAAAAA
AGTCGGAGCTAAGCTGAAAGGTAAGTTAGGACAGCCTTCGGCTTCATCTA
TGCCGAGTACCAAGGGGATCGGGGACGGGGCTGCCTCAGCGGGCGAGGCA
TTCGAGGTAGGAGCGCCCGCGGGGGAAAACGGCAGCGTGCAGGCATTTGG
TATGCGCCCGACGGTAACCGGGATCGGTGTAGCAGGGAGGGAGAACGAGG
ACGTTCCGCCGAAGAAGCGGAAGGTCGCCGCCTCGTTGGACGAAGAGCAA
TACGTCACCAAGGAGACGTGCCGAGCCAGAAGCGCTGGCGGTGAGGGCAC
GAGCAAGAGTGACGGGGGCGATGACGCAGGTGTCGCGCTCGCCGGCGACC
CAAGGAGACTGGAAGCGGCCCCTCTCGGCGCTGCTACTCTAACGGAAGCG
GGGACTCGTGACGTATTCGACGCACCGCTATTACCTGTAGCGACAGCGTC
AGCCGGAACAACCTCAGCTTCAGCATCGCAGTCGACGCTGGCAGACTCCC
CAACCGTGACGCCCTTGGGACGAGCCGCTCTTACGCTCACTGGTGTGCCT
AGCACGACATCCCACATCGAGGGAGAGCAGAAGATATTGGAGAGGCTGGG
GAGAAGCGTCACCGCCGCCGTAGATAGTCGTGGTTGGACGCCACCGGGAA
CTGCAGGCGAGACCGTGGCGATGGCTTCGAAGGCGCCGCCGATGGAGGGA
GAGGGGCAAGCTGAGACGCACATCATGGCTGGGCAAGCGGTGCACTTGAA
GTGTAGTCACTGTAGGACTCGTTTCTCGAGGGCAGGGTGCTCTACAGCCA
GCTGCCTCGACTGTTGCTTCAAGGCCGCTGTGCCCTGCGCAGCGCACGCG
AAGCAACTAGAGCGTAAACGCCTCGAGGAGGAACTCCTTGCCGCAGGACC
CAGCCGTGAGGAGCGCAGGCGATTGGCCAAAGGTGTCTTCAAGGAGGAGG
CAATCCACGCCATCGGAGACACAGCCACGCTTTGGTGCTTCGGGGACTTC
CTGTGCGCCAGGTCGAACCAGGGGGCGTTCAAGACCCTCTCCCGGAAGCA
GCGCGCGGTCACGGGTCGCAGGGCTCGCCTCTCGACCGGGAGGTTGGTGG
CATCGTCAAAGATCCGAGCTTCCCTTACCGCTCTCCGTGGCCCTGCGGGA
GGGCTGGGTGAGAGTAGTCGCCGCCGCGTGCGCCCTTCGATTGCGCGCTG
GCGTCGCAAAAGCGCGGAGATGCTCGCGGCGGTCGCTTCCGGTTCGGCGC
CGTTTTCCTAA