prot_A-nodosum_M_contig879.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig879.14.1
Unique Nameprot_A-nodosum_M_contig879.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length216
Homology
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A6H5JSY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY9_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.750e-64
Identity = 119/214 (55.61%), Postives = 143/214 (66.82%), Query Frame = 0
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGS-------KGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEA--ASRHAVRGYFDSLRAEVARDRIKVTVV 205
            V WVTGAD G GE++AINLAVNGA+VILSG SL ELERVQRLCILAWMKAV+WE+  A+ +G TRLDR +++PLD RD FIL  AA  AE M+ RP+ MVFHC G  VVAG        +G + V+ A  +           L GA+ LTKAVLPSMLD QEGH+V +    S     E  S     +S+HA RGYFD LR EV+RD +K+T V
Sbjct:  241 VVWVTGADHGFGEQMAINLAVNGARVILSGTSLEELERVQRLCILAWMKAVDWELLDAILEGLTRLDRVMIMPLDARDTFILDRAASKAEEMLDRPVGMVFHCQGGGVVAGEWDEEEEEEGDLDVEDASGN-----------LRGAIALTKAVLPSMLDEQEGHLVVLGGDDSFASREETSSPAGVVSSKHAARGYFDRLRTEVSRDGVKITTV 443          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: D8LHS3_ECTSI (Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS3_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 2.410e-64
Identity = 123/210 (58.57%), Postives = 146/210 (69.52%), Query Frame = 0
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAI--LWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEA---ASRHAVRGYFDSLRAEVARDRIKVTVV 205
            VAWVTGAD GLGE++AINLAVNGA+VILSG SL ELERVQRLCILAWMKAV+WE+  A+ +G TRLDR +++PLDVRD FIL  A R AE M+ RP+ MVFHC G  VVAG       D            +EA   L GA+ LTKAVLPSMLD QEGH+V +  G     + E  S+ A   +S+HA RGYFD LR EV+RD +KVT +
Sbjct:  305 VAWVTGADHGLGEQMAINLAVNGARVILSGTSLEELERVQRLCILAWMKAVDWELLDAILEGLTRLDRVMIMPLDVRDTFILDHATRKAEDMLDRPVGMVFHCQGGGVVAGEWDE--EDEXXXXXXXXDLDLEASGNLRGAISLTKAVLPSMLDEQEGHLVVLG-GDDFFTSREETSSPAGVVSSKHAARGYFDRLRREVSRDGVKVTTL 511          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A836CN07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN07_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.770e-42
Identity = 92/214 (42.99%), Postives = 131/214 (61.21%), Query Frame = 0
Query:    3 WVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARN--------AESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 208
            WVTGA  G+G++VAI  A  GA V+L+G +L EL RVQR C+ AW +A  +  ++A  +GW   + A + P+DVRD    P+A +         AE  +GRPID++ HCAG   V+    V+    + + E     VM+A   GA  LT+A LP+ML R  G + A++ G+  +  P  R++ AA++HAVRGYFD+LRAEVA   + VTVV+PG
Sbjct:  115 WVTGASSGIGKQVAIQAAAAGAHVLLTGRNLEELARVQRACVAAWKRARRYTRARAFLEGWRPAEVAYLFPMDVRDTEFAPEAVKRMAYVSMEAAEERLGRPIDVLIHCAG---VSSRAPVLETSTSTDRE-----VMDASFLGAAALTRAALPAMLRRGGGAVAAVS-GAHGVAAPARRASNAAAKHAVRGYFDALRAEVAAHGVTVTVVYPG 319          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A7Y5MRL2_9BACT (SDR family oxidoreductase n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y5MRL2_9BACT)

HSP 1 Score: 121 bits (304), Expect = 2.970e-30
Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 0
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 208
            V W+TGA  G+GE +A   A  GA++ILS  + AELERV++ C                    T   + L+LPLDV     +P+A + A +  G+ ID++ + AG      S+  +  D A   + R   +M+    G V +TKAVLP ML R+ G IV I+     +  P GRSA AAS+HA+ G+FD+LRAEV R  IKVT++ PG
Sbjct:    7 VVWITGASSGIGEHLAYAFATQGARLILSSRNEAELERVKKRC--------------------TAAAQVLLLPLDVAQFGTIPEAVQKATAQFGQ-IDVLVNNAGI-----SQRALAADSAFEVDQR---IMDVNFLGTVAMTKAVLPLMLARRSGQIVVISSVMGKVGFP-GRSAYAASKHALHGFFDTLRAEVFRHNIKVTILCPG 184          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A3M0CWT6_9PROT (Short-subunit dehydrogenase n=1 Tax=Eilatimonas milleporae TaxID=911205 RepID=A0A3M0CWT6_9PROT)

HSP 1 Score: 117 bits (292), Expect = 2.060e-28
Identity = 75/206 (36.41%), Postives = 116/206 (56.31%), Query Frame = 0
Query:    3 WVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 208
            W+TGA  G+GE +A+  A  G  +ILS     EL RV+ LC               V +G T  +  ++LPLDV ++  LPD  + A++  GR IDM+ + AG      S+  + +D  +   A + ++ E  ++G + LTKAVLP ML+++ GH+   A  +  +  P+ R+   A++HA+ G+FD+LRAEVA   IKVT + PG
Sbjct:    9 WITGASSGIGEALALEFASRGTPLILSARREDELARVKNLC---------------VERG-TEANAVMILPLDVTNETALPDIVQTAKAFTGR-IDMLINNAGI-----SQRALCIDTDM---ATYRRLFEVDVFGQIALTKAVLPIMLEQESGHLAVTASVAGKVGAPQ-RTGYCAAKHAMMGFFDALRAEVAHRGIKVTTITPG 188          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A2D7NW15_9BACT (Short chain dehydrogenase n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A2D7NW15_9BACT)

HSP 1 Score: 116 bits (290), Expect = 3.640e-28
Identity = 75/211 (35.55%), Postives = 118/211 (55.92%), Query Frame = 0
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPGPMK 211
            + WVTGA  G+GE +   L   GAK+ILS     EL+RV++ C      A N E+               +L LD+ +   L +  + A S +G PID++ HC G   ++    ++    AV+      Q+ME   +G + ++K +LPSM++R++GH V I   + ++ TP  RSA AAS+HA+ G+FD+LRAE  +D I V+++ PG +K
Sbjct:    8 IIWVTGASSGIGEALVYQLNQLGAKLILSARRTNELKRVKKAC------AKNGEVH--------------LLTLDLSESKTLEEKCKQALSFMG-PIDLIIHCGG---ISQRDKIMNTSLAVDR-----QIMEVNYFGTIAISKLLLPSMVNRKKGHHVIITSATGIISTPL-RSAYAASKHALHGFFDALRAEHEKDNIYVSLICPGYIK 188          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A1Z8QRI7_9BACT (Short chain dehydrogenase n=2 Tax=unclassified Flammeovirgaceae TaxID=340671 RepID=A0A1Z8QRI7_9BACT)

HSP 1 Score: 115 bits (289), Expect = 5.120e-28
Identity = 75/211 (35.55%), Postives = 119/211 (56.40%), Query Frame = 0
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPGPMK 211
            + WVTGA  G+GE +   L   GAK+ILS   ++ELERV+  C        N E++              +L LD+ +   L +  + A +++G PID++ HC G   ++    V+    AV+      ++ME   +G + L+K +LPSM+ R++GH V I   + ++ TP  RSA AAS+HA+ G+FD+LRAE  +D I V+++ PG +K
Sbjct:    8 IIWVTGASSGIGEALVYQLHQLGAKLILSARRVSELERVKNAC------TENSEVN--------------LLRLDLSEAETLEEKCKQASALMG-PIDLIIHCGG---ISQRDKVMNTSLAVDR-----RIMEINYFGTISLSKFLLPSMVTRKQGHHVVITSVTGIISTPL-RSAYAASKHALHGFFDALRAEHEKDNINVSLICPGYIK 188          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A399ZGI0_9CHLR (Short chain dehydrogenase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A399ZGI0_9CHLR)

HSP 1 Score: 114 bits (286), Expect = 1.360e-27
Identity = 75/209 (35.89%), Postives = 110/209 (52.63%), Query Frame = 0
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQ-VMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 208
            + W+TGA  G+GE +A      GA++ILS    AELERV+  C+                       R  +LPLD  D   +P+  + A ++ G            D++  + G+      V  E   +Q V +   +GAV LTKAVLP ML+R+ GHIV ++  +  L  P+  +A  AS+HA++GYF+SLRAEVAR  +KVT++ PG
Sbjct:    9 IIWLTGASSGIGEALAYEFCQRGARLILSARRAAELERVRAQCVDP--------------------TRVKILPLDAADLENIPEKGKQARALFGT----------LDILVNNAGIAQRGRVVETEMLALQRVFQVNFFGAVALTKAVLPEMLERRAGHIVVVSSLTGKLPVPK-HAAYCASKHALQGYFNSLRAEVARQGVKVTLLLPG 186          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A3B8IXS5_9BACT (Short chain dehydrogenase n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8IXS5_9BACT)

HSP 1 Score: 114 bits (285), Expect = 1.990e-27
Identity = 81/208 (38.94%), Postives = 114/208 (54.81%), Query Frame = 0
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 208
            V WVTGA  G+GE +A  L+  GAKVI+S    AELERV+ LC                       D+  VLPLD+ +   + +  + A +  GR +DM+ +  G      S+  + V+ AV+   R   +M+    G V LTKA+LP ML R+ GHIVA++  +    TP  RS  A S+HA+ G+FDSLRAE+ R+ +KV +V PG
Sbjct:    8 VVWVTGASSGIGEGLATELSKAGAKVIISARREAELERVKALC--------------------AHPDQVAVLPLDLVELEDMEEKVKAAIAAFGR-VDMLINNGGI-----SQRDLTVNTAVSVYER---IMKVNYLGTVALTKAILPHMLARKSGHIVAVSSLTGKFGTPY-RSGYAGSKHALHGFFDSLRAEIWRENVKVLMVAPG 185          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A7C7FRA3_9PROT (SDR family oxidoreductase n=2 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7C7FRA3_9PROT)

HSP 1 Score: 113 bits (283), Expect = 3.920e-27
Identity = 84/211 (39.81%), Postives = 111/211 (52.61%), Query Frame = 0
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPGPMK 211
            V W+TGA  G+GE +A      GA +ILS    +ELERV   C     K    EI               V PLD+     + DA+ +    + R ID++ +CAG   +A    V+  +  V H+     +M+   +GAV LTKAVLPSM+ R  G IV I   + L  TP  RS  AAS+HAV G+FD LRAEVA + I VT V PGP++
Sbjct:    7 VVWITGASSGIGEALAYAFYEEGANLILSARRKSELERVMSEC-----KNGEGEI--------------YVQPLDMSQTEKMTDASNSVVDRLSR-IDILVNCAG---IAQRSSVLNAELHVFHK-----IMQVNFFGAVALTKAVLPSMVHRSSGQIVIIGSPAGLFGTPL-RSGYAASKHAVHGFFDCLRAEVAGNGIFVTNVIPGPIR 188          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSY9_9PHAE1.750e-6455.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHS3_ECTSI2.410e-6458.57Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A836CN07_9STRA1.770e-4242.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7Y5MRL2_9BACT2.970e-3039.42SDR family oxidoreductase n=1 Tax=Saprospiraceae b... [more]
A0A3M0CWT6_9PROT2.060e-2836.41Short-subunit dehydrogenase n=1 Tax=Eilatimonas mi... [more]
A0A2D7NW15_9BACT3.640e-2835.55Short chain dehydrogenase n=1 Tax=Flammeovirgaceae... [more]
A0A1Z8QRI7_9BACT5.120e-2835.55Short chain dehydrogenase n=2 Tax=unclassified Fla... [more]
A0A399ZGI0_9CHLR1.360e-2735.89Short chain dehydrogenase n=1 Tax=Chloroflexi bact... [more]
A0A3B8IXS5_9BACT1.990e-2738.94Short chain dehydrogenase n=1 Tax=Cytophagales bac... [more]
A0A7C7FRA3_9PROT3.920e-2739.81SDR family oxidoreductase n=2 Tax=Rhodospirillales... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 150..166
score: 23.44
coord: 1..16
score: 41.29
coord: 198..215
score: 26.23
coord: 177..196
score: 26.83
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 67..211
e-value: 1.2E-17
score: 64.0
NoneNo IPR availableGENE3D3.40.50.720coord: 1..216
e-value: 2.3E-33
score: 117.6
NoneNo IPR availablePANTHERPTHR44196DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7Bcoord: 2..210
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig879contigA-nodosum_M_contig879:202802..206657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig879.14.1mRNA_A-nodosum_M_contig879.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig879 202802..206659 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig879.14.1 ID=prot_A-nodosum_M_contig879.14.1|Name=mRNA_A-nodosum_M_contig879.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=216bp
VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKA
VNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMV
FHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSM
LDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRI
KVTVVHPGPMKPFATH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR036291NAD(P)-bd_dom_sf