mRNA_A-nodosum_M_contig879.14.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig879.14.1
Unique NamemRNA_A-nodosum_M_contig879.14.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A6H5JSY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY9_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.750e-64
Identity = 119/214 (55.61%), Postives = 143/214 (66.82%), Query Frame = 1
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGS-------KGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEA--ASRHAVRGYFDSLRAEVARDRIKVTVV 615
            V WVTGAD G GE++AINLAVNGA+VILSG SL ELERVQRLCILAWMKAV+WE+  A+ +G TRLDR +++PLD RD FIL  AA  AE M+ RP+ MVFHC G  VVAG        +G + V+ A  +           L GA+ LTKAVLPSMLD QEGH+V +    S     E  S     +S+HA RGYFD LR EV+RD +K+T V
Sbjct:  241 VVWVTGADHGFGEQMAINLAVNGARVILSGTSLEELERVQRLCILAWMKAVDWELLDAILEGLTRLDRVMIMPLDARDTFILDRAASKAEEMLDRPVGMVFHCQGGGVVAGEWDEEEEEEGDLDVEDASGN-----------LRGAIALTKAVLPSMLDEQEGHLVVLGGDDSFASREETSSPAGVVSSKHAARGYFDRLRTEVSRDGVKITTV 443          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: D8LHS3_ECTSI (Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS3_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 2.410e-64
Identity = 123/210 (58.57%), Postives = 146/210 (69.52%), Query Frame = 1
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAI--LWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEA---ASRHAVRGYFDSLRAEVARDRIKVTVV 615
            VAWVTGAD GLGE++AINLAVNGA+VILSG SL ELERVQRLCILAWMKAV+WE+  A+ +G TRLDR +++PLDVRD FIL  A R AE M+ RP+ MVFHC G  VVAG       D            +EA   L GA+ LTKAVLPSMLD QEGH+V +  G     + E  S+ A   +S+HA RGYFD LR EV+RD +KVT +
Sbjct:  305 VAWVTGADHGLGEQMAINLAVNGARVILSGTSLEELERVQRLCILAWMKAVDWELLDAILEGLTRLDRVMIMPLDVRDTFILDHATRKAEDMLDRPVGMVFHCQGGGVVAGEWDE--EDEXXXXXXXXDLDLEASGNLRGAISLTKAVLPSMLDEQEGHLVVLG-GDDFFTSREETSSPAGVVSSKHAARGYFDRLRREVSRDGVKVTTL 511          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A836CN07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN07_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.770e-42
Identity = 92/214 (42.99%), Postives = 131/214 (61.21%), Query Frame = 1
Query:    7 WVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARN--------AESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 624
            WVTGA  G+G++VAI  A  GA V+L+G +L EL RVQR C+ AW +A  +  ++A  +GW   + A + P+DVRD    P+A +         AE  +GRPID++ HCAG   V+    V+    + + E     VM+A   GA  LT+A LP+ML R  G + A++ G+  +  P  R++ AA++HAVRGYFD+LRAEVA   + VTVV+PG
Sbjct:  115 WVTGASSGIGKQVAIQAAAAGAHVLLTGRNLEELARVQRACVAAWKRARRYTRARAFLEGWRPAEVAYLFPMDVRDTEFAPEAVKRMAYVSMEAAEERLGRPIDVLIHCAG---VSSRAPVLETSTSTDRE-----VMDASFLGAAALTRAALPAMLRRGGGAVAAVS-GAHGVAAPARRASNAAAKHAVRGYFDALRAEVAAHGVTVTVVYPG 319          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A7Y5MRL2_9BACT (SDR family oxidoreductase n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y5MRL2_9BACT)

HSP 1 Score: 121 bits (304), Expect = 2.970e-30
Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 1
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 624
            V W+TGA  G+GE +A   A  GA++ILS  + AELERV++ C                    T   + L+LPLDV     +P+A + A +  G+ ID++ + AG      S+  +  D A   + R   +M+    G V +TKAVLP ML R+ G IV I+     +  P GRSA AAS+HA+ G+FD+LRAEV R  IKVT++ PG
Sbjct:    7 VVWITGASSGIGEHLAYAFATQGARLILSSRNEAELERVKKRC--------------------TAAAQVLLLPLDVAQFGTIPEAVQKATAQFGQ-IDVLVNNAGI-----SQRALAADSAFEVDQR---IMDVNFLGTVAMTKAVLPLMLARRSGQIVVISSVMGKVGFP-GRSAYAASKHALHGFFDTLRAEVFRHNIKVTILCPG 184          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A3M0CWT6_9PROT (Short-subunit dehydrogenase n=1 Tax=Eilatimonas milleporae TaxID=911205 RepID=A0A3M0CWT6_9PROT)

HSP 1 Score: 117 bits (292), Expect = 2.060e-28
Identity = 75/206 (36.41%), Postives = 116/206 (56.31%), Query Frame = 1
Query:    7 WVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 624
            W+TGA  G+GE +A+  A  G  +ILS     EL RV+ LC               V +G T  +  ++LPLDV ++  LPD  + A++  GR IDM+ + AG      S+  + +D  +   A + ++ E  ++G + LTKAVLP ML+++ GH+   A  +  +  P+ R+   A++HA+ G+FD+LRAEVA   IKVT + PG
Sbjct:    9 WITGASSGIGEALALEFASRGTPLILSARREDELARVKNLC---------------VERG-TEANAVMILPLDVTNETALPDIVQTAKAFTGR-IDMLINNAGI-----SQRALCIDTDM---ATYRRLFEVDVFGQIALTKAVLPIMLEQESGHLAVTASVAGKVGAPQ-RTGYCAAKHAMMGFFDALRAEVAHRGIKVTTITPG 188          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A2D7NW15_9BACT (Short chain dehydrogenase n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A2D7NW15_9BACT)

HSP 1 Score: 116 bits (290), Expect = 3.640e-28
Identity = 75/211 (35.55%), Postives = 118/211 (55.92%), Query Frame = 1
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPGPMK 633
            + WVTGA  G+GE +   L   GAK+ILS     EL+RV++ C      A N E+               +L LD+ +   L +  + A S +G PID++ HC G   ++    ++    AV+      Q+ME   +G + ++K +LPSM++R++GH V I   + ++ TP  RSA AAS+HA+ G+FD+LRAE  +D I V+++ PG +K
Sbjct:    8 IIWVTGASSGIGEALVYQLNQLGAKLILSARRTNELKRVKKAC------AKNGEVH--------------LLTLDLSESKTLEEKCKQALSFMG-PIDLIIHCGG---ISQRDKIMNTSLAVDR-----QIMEVNYFGTIAISKLLLPSMVNRKKGHHVIITSATGIISTPL-RSAYAASKHALHGFFDALRAEHEKDNIYVSLICPGYIK 188          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A1Z8QRI7_9BACT (Short chain dehydrogenase n=2 Tax=unclassified Flammeovirgaceae TaxID=340671 RepID=A0A1Z8QRI7_9BACT)

HSP 1 Score: 115 bits (289), Expect = 5.120e-28
Identity = 75/211 (35.55%), Postives = 119/211 (56.40%), Query Frame = 1
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPGPMK 633
            + WVTGA  G+GE +   L   GAK+ILS   ++ELERV+  C        N E++              +L LD+ +   L +  + A +++G PID++ HC G   ++    V+    AV+      ++ME   +G + L+K +LPSM+ R++GH V I   + ++ TP  RSA AAS+HA+ G+FD+LRAE  +D I V+++ PG +K
Sbjct:    8 IIWVTGASSGIGEALVYQLHQLGAKLILSARRVSELERVKNAC------TENSEVN--------------LLRLDLSEAETLEEKCKQASALMG-PIDLIIHCGG---ISQRDKVMNTSLAVDR-----RIMEINYFGTISLSKFLLPSMVTRKQGHHVVITSVTGIISTPL-RSAYAASKHALHGFFDALRAEHEKDNINVSLICPGYIK 188          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A399ZGI0_9CHLR (Short chain dehydrogenase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A399ZGI0_9CHLR)

HSP 1 Score: 114 bits (286), Expect = 1.360e-27
Identity = 75/209 (35.89%), Postives = 110/209 (52.63%), Query Frame = 1
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQ-VMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 624
            + W+TGA  G+GE +A      GA++ILS    AELERV+  C+                       R  +LPLD  D   +P+  + A ++ G            D++  + G+      V  E   +Q V +   +GAV LTKAVLP ML+R+ GHIV ++  +  L  P+  +A  AS+HA++GYF+SLRAEVAR  +KVT++ PG
Sbjct:    9 IIWLTGASSGIGEALAYEFCQRGARLILSARRAAELERVRAQCVDP--------------------TRVKILPLDAADLENIPEKGKQARALFGT----------LDILVNNAGIAQRGRVVETEMLALQRVFQVNFFGAVALTKAVLPEMLERRAGHIVVVSSLTGKLPVPK-HAAYCASKHALQGYFNSLRAEVARQGVKVTLLLPG 186          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A3B8IXS5_9BACT (Short chain dehydrogenase n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8IXS5_9BACT)

HSP 1 Score: 114 bits (285), Expect = 1.990e-27
Identity = 81/208 (38.94%), Postives = 114/208 (54.81%), Query Frame = 1
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 624
            V WVTGA  G+GE +A  L+  GAKVI+S    AELERV+ LC                       D+  VLPLD+ +   + +  + A +  GR +DM+ +  G      S+  + V+ AV+   R   +M+    G V LTKA+LP ML R+ GHIVA++  +    TP  RS  A S+HA+ G+FDSLRAE+ R+ +KV +V PG
Sbjct:    8 VVWVTGASSGIGEGLATELSKAGAKVIISARREAELERVKALC--------------------AHPDQVAVLPLDLVELEDMEEKVKAAIAAFGR-VDMLINNGGI-----SQRDLTVNTAVSVYER---IMKVNYLGTVALTKAILPHMLARKSGHIVAVSSLTGKFGTPY-RSGYAGSKHALHGFFDSLRAEIWRENVKVLMVAPG 185          
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A7C7FRA3_9PROT (SDR family oxidoreductase n=2 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7C7FRA3_9PROT)

HSP 1 Score: 113 bits (283), Expect = 3.920e-27
Identity = 84/211 (39.81%), Postives = 111/211 (52.61%), Query Frame = 1
Query:    1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPGPMK 633
            V W+TGA  G+GE +A      GA +ILS    +ELERV   C     K    EI               V PLD+     + DA+ +    + R ID++ +CAG   +A    V+  +  V H+     +M+   +GAV LTKAVLPSM+ R  G IV I   + L  TP  RS  AAS+HAV G+FD LRAEVA + I VT V PGP++
Sbjct:    7 VVWITGASSGIGEALAYAFYEEGANLILSARRKSELERVMSEC-----KNGEGEI--------------YVQPLDMSQTEKMTDASNSVVDRLSR-IDILVNCAG---IAQRSSVLNAELHVFHK-----IMQVNFFGAVALTKAVLPSMVHRSSGQIVIIGSPAGLFGTPL-RSGYAASKHAVHGFFDCLRAEVAGNGIFVTNVIPGPIR 188          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSY9_9PHAE1.750e-6455.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHS3_ECTSI2.410e-6458.57Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A836CN07_9STRA1.770e-4242.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7Y5MRL2_9BACT2.970e-3039.42SDR family oxidoreductase n=1 Tax=Saprospiraceae b... [more]
A0A3M0CWT6_9PROT2.060e-2836.41Short-subunit dehydrogenase n=1 Tax=Eilatimonas mi... [more]
A0A2D7NW15_9BACT3.640e-2835.55Short chain dehydrogenase n=1 Tax=Flammeovirgaceae... [more]
A0A1Z8QRI7_9BACT5.120e-2835.55Short chain dehydrogenase n=2 Tax=unclassified Fla... [more]
A0A399ZGI0_9CHLR1.360e-2735.89Short chain dehydrogenase n=1 Tax=Chloroflexi bact... [more]
A0A3B8IXS5_9BACT1.990e-2738.94Short chain dehydrogenase n=1 Tax=Cytophagales bac... [more]
A0A7C7FRA3_9PROT3.920e-2739.81SDR family oxidoreductase n=2 Tax=Rhodospirillales... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig879contigA-nodosum_M_contig879:202802..206659 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LHS3
PFAMsCoaE,HLH,adh_short
Model size652
Max annot lvl2759|Eukaryota
KEGG koko:K11165
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0003845,GO:0005488,GO:0005496,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0006109,GO:0006140,GO:0006629,GO:0006694,GO:0006704,GO:0006706,GO:0006713,GO:0008150,GO:0008152,GO:0008202,GO:0008211,GO:0008289,GO:0008610,GO:0009056,GO:0009058,GO:0009605,GO:0009719,GO:0009725,GO:0009894,GO:0009987,GO:0009991,GO:0010033,GO:0010675,GO:0010817,GO:0012505,GO:0014070,GO:0016020,GO:0016042,GO:0016229,GO:0016491,GO:0016614,GO:0016616,GO:0019219,GO:0019220,GO:0019222,GO:0031090,GO:0031323,GO:0031329,GO:0031667,GO:0031965,GO:0031967,GO:0031975,GO:0031984,GO:0032355,GO:0032870,GO:0033764,GO:0033993,GO:0034248,GO:0036094,GO:0042175,GO:0042221,GO:0042445,GO:0042446,GO:0042447,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045177,GO:0048037,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051174,GO:0051193,GO:0051196,GO:0051716,GO:0055114,GO:0060255,GO:0062012,GO:0065007,GO:0065008,GO:0070887,GO:0071310,GO:0071392,GO:0071396,GO:0071407,GO:0071495,GO:0071704,GO:0080090,GO:0097159,GO:0098827,GO:1901265,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901700,GO:1901701,GO:1902031
Exons6
Evalue3.95e-65
EggNOG OGsCOG1028@1|root,KOG1205@2759|Eukaryota
Descriptionoxidation-reduction process
Cds size648
COG categoryIQ
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig879.14.1prot_A-nodosum_M_contig879.14.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig879 202802..206657 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870280.3811805-CDS-A-nodosum_M_contig879:202801..2028761680870280.3811805-CDS-A-nodosum_M_contig879:202801..202876Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig879 202802..202876 +
1680870280.396811-CDS-A-nodosum_M_contig879:203553..2036491680870280.396811-CDS-A-nodosum_M_contig879:203553..203649Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig879 203554..203649 +
1680870280.4080107-CDS-A-nodosum_M_contig879:204906..2051251680870280.4080107-CDS-A-nodosum_M_contig879:204906..205125Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig879 204907..205125 +
1680870280.4181387-CDS-A-nodosum_M_contig879:205804..2059301680870280.4181387-CDS-A-nodosum_M_contig879:205804..205930Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig879 205805..205930 +
1680870280.4324312-CDS-A-nodosum_M_contig879:206240..2063461680870280.4324312-CDS-A-nodosum_M_contig879:206240..206346Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig879 206241..206346 +
1680870280.4444127-CDS-A-nodosum_M_contig879:206631..2066571680870280.4444127-CDS-A-nodosum_M_contig879:206631..206657Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig879 206632..206657 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig879.14.1

>prot_A-nodosum_M_contig879.14.1 ID=prot_A-nodosum_M_contig879.14.1|Name=mRNA_A-nodosum_M_contig879.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=216bp
VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKA
VNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMV
FHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSM
LDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRI
KVTVVHPGPMKPFATH
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mRNA from alignment at A-nodosum_M_contig879:202802..206659+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig879.14.1 ID=mRNA_A-nodosum_M_contig879.14.1|Name=mRNA_A-nodosum_M_contig879.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3858bp|location=Sequence derived from alignment at A-nodosum_M_contig879:202802..206659+ (Ascophyllum nodosum dioecious)
GTGGCCTGGGTGACGGGCGCCGACCGTGGGCTGGGAGAGCGCGTGGCTAT CAACCTCGCGGTCAACGGCGCCAAGGTGAAAGTCCGCGCTCTCACTTTCT GCGTTTGCTGTTTCTCTGCCGCTCCACGGGTCCCGAGCGAGAGTATTCCT CGCGGCTAGAACAGGTCGAGAAATTCCCCCCGCAATGTATTCCTCCGCGC GAGACCCGTGGCAAGGTTTCGCTTGGCACCCGCGACGGCACAGCCGGGCG TTCGGCACCCGGCATCGTGGTGAAAGAATAGGCGTTTTTCTTCGCCGGGG TGCGGGATTTTTTATTGTCTAATCGACCTTGAGCGCGATATAGAGTGCAG TTTACATTCTGTCTCTTGAAAAAAAAAAAATCCCGTTGTATTTATCGGTT GAACTTGGCGAATCGCGTTCATCCGCAAGAGAAGAAAGAAATTTCCGTCC AGCGCGATACGAGTGTGGCATCCTTGATGTCAAACACCCTGCTGCGCCTC TTGTGTTAATCTTGTTACAGGATCGTGTGTATGCGAGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGT GTGTATTTATTAAATTGCACATAACCGCGCAATCCGGCCCTGTCATCCTA GCCATTCTATGTCACTCGCATTGATCCTCCCAAGGGGGGATCAATGATAC TTATTATGAAAACCTGTGTGTGTGGGTGTGTGTGTTTGTTTTCTGCCTTT AGGTTATCCTTTCAGGCTTGAGCCTCGCCGAGCTCGAGCGCGTGCAGCGC CTGTGCATCCTCGCGTGGATGAAGGCCGTCAACTGGGAAATCTCAAAGGT GTGGGGGAGAGGGTCGTGATCGGTGGCGGCGCCCCTTTCGCGAGACCACC AATGTCTATCCTACAAATATATCATATATATATATATATATCATTCTACT TGTTTGTTCCACATTCAGACAGACAGACACACACACACCTGGGAGGATCA ATGCGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCGCGGTTA TGTGCAATTTAATAAATACACACACACACACACACACACAAGATTTGTAC AAGTAGAGAGAGTGTGTCCCCTTTGTCGCGTCTGATCAGAGGTTTTCGTA ACAAGTATCATTGATCCCCCCTTGGGAGGATCAATGCGAGTGGCATAGAA TGACTAGGATGACAGGGGCGGATTGCGCGGTTATGTGCAATTTGATAAAT ACACACACACACACACACACACACACACACACACACATCGCGTTTGATCA GAGGTTTTCGTAACAAGTATCATTGATCCCCCCTTGGGAGGATCAATGCG AGTGGCATAGAATGACTAGGATGACAAGGCCGGATTGCGCGGTTATGTGC AATTTAATAAATACACACGCACACACACACACTTAGCGCATTCTGCGCAA CGCGTTTGATAATTTCTACCCTGCCTTTCCTTGTCTCGGGTTTTCGAGGG TTATCTTTGAGTTTACCGTAGAGGGGGCGCCGGTGAAAACCATCGAAATA ATATCACCACGAGTTGTTCTCCTAATGACTAAACCACCAAAATTGTTTCA AGTCTAAAATGAATTGGTCGGAAGAACCCCCCTCCTCCCCTGGTACTATT GAGTAATATTAGTAATATAGCGTGAAGTGGTGGCCTCGGCGACGAGACTT GAAACAAGACTTGAAATGAGACTTGGAATCGATTTGACACTTGCCTAAGG TGCTGTCAAAACGCCCTTCGTGTTCAGCGAACGCTCTAGGGTTCGCAGCA GGAACAAATCACTCCTGAGCAGACAAGTCGCGCGGTTGAAAACATGACTT GGAAGTTGCGTTGCAGGGAAGTATGCTTACATGGAATTGATCCCTCTGTG ACGACAGGCGGGGTCCGGGCAGCAGCGTTGCAGTTGAAATATTACCATCG AAAAGGGAGTTTGTGATGGAAATGGCAAACAGCAAACACGCTGGCAATCA CAAAACAGTCATGACACCGTTTAGCGTGTTTTTTTCAGAAGCAAAATACG CAACAATACCGCCCCCGCCGCCGTCGCGCGCCGCGGTTTCCACTAACATG GTCAGGCGGTAACCAAGGGCTGGACCAGGTTGGACCGCGCCCTGGTGCTG CCTCTCGACGTGCGGGACGACTTCATCCTCCCCGACGCCGCGAGAAACGC CGAGTCCATGGTGGGGCGCCCGATCGACATGGTCTTCCACTGTGCGGGAA CGGACGTGGTGGCGGGGTCGAAAGGCGTCATCGGGGTGGATCCCGCCGTC AATCACGAGGCCAGACACGTTCAGGTTCGCTAGCGGAGGGAGGTCGGATC TCTGTAGGCGCTAAATGATTTCTGCTGGTTTGTTTTTGCTAACGGTTTTT GTGTCTCCGGTGAATGCGCGATGCCGTGCTTGCTGCTGCTGCTGTAGAAA AGCTGTTGGTGGGTCGCACGATTTCCCTTCCTCCTCGAGAAGATTTCCCC CGCTCGCCACGCGTTTTGAAAGCGGGAATGCTTTTTGAGGCAAGAATGGC CGTAACATTTTTGTCTTTTTCTTTTTTCTCAAAGCCTGGACTTGTTTAGT GCTTATTGAACCGCTGGCATTTAGAAGCGTGATGTGGTGTGTGTGGACAA GGCGAGAGCGATTCCAGTCCGCCGTATATATGTTCAAGATAAAGGGGGTA GGGTGACAAATGTACCCCCAGATTCAGGGGAGGCTGTATCGAACAGTTCC TCGAGAGGAAGGACGTGATGAATCCCCTGGTGGAATGAAACATGTTAGGG GTAAGCTCGCGAGTAGCCTATCTCATTTGAGGGTATGGGTAGCTCTATCC CCGATAGGGGCTGTCTTTATACCGCCCCTCGACTCCCTGAAGATCGGGGA AAATGTTTCGACGAAACCCCCAACCGATTTGTCACGTGGTAGCAAAAAAC TAAAAATACAGCAATGCTTTTTCTAAAATACACGTCGGGCTTAAAAAAAG TAGGTCATGGAAGCGATTCTCTGGGGGGCCGTGGGGTTAACAAAGGCGGT CCTACCGAGCATGCTTGACAGACAAGAAGGCCACATCGTCGCCATAGCCG AGGGGAGTTCTCTTCTGAGGACTCCAGAGGTGAGCGAgggggGGGGGGAG ATGAGGCGAAAATCCCCGCTTTCCGCCACAGATGCGAGCGAGCTCGACAT CATCACCAGAAGTTATGGTTGGTGGGACCTCATCGCGGAAGCGACCCATA TCTACGAAGCCCGCGTAACCTTGGACCGTTGATCATCGATCGAGTGGGAG CGAGCGGGATTGACTTCTTGCCCCCAACCCTCGGCTGCGACGTCGCCTTC GTGGTTGAAATCCCTAAGATTTCCGCCGCGCCACCGACTCTCGACTCCTT TTGTCCGTTTTTTTTTTTATTTTGCTCTTTTCTCCGCAGGGACGATCCGC CGAAGCGGCGTCGCGTCACGCCGTGCGAGGTTACTTCGACAGCCTTCGGG CAGAGGTGGCACGAGACCGCATCAAGGTCACCGTGGTGCATCCAGGTGAT GACAATGACAACGATACAGCGCATGAAGCTACTAGGTGCGCTGTCGTGGT AGGGTACGGTATTTGTGTACCTTAAATGTAGTAGTATTGCGCTCGCGCTT TCTAGAGGGGGGGGGGGCGGGGAGAGGGCGATGCACAGACCAAAGACGTG CCGAATCGTTTTTCCATCGGCCGTCCCTCTATCGTTTTGCCGAGGAAGTA TATTTCGCACAGGTCGGAGAAGTGCGGCCCCGCCCTGGTAACTTACCTCC GGCGTCGCGCCTGCTCCTGCCGCCTTCCAGGTCCCATGAAACCGTTCGCG ACTCACCT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig879:202802..206659+

>mRNA_A-nodosum_M_contig879.14.1 ID=mRNA_A-nodosum_M_contig879.14.1|Name=mRNA_A-nodosum_M_contig879.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=648bp|location=Sequence derived from alignment at A-nodosum_M_contig879:202802..206659+ (Ascophyllum nodosum dioecious)
GTGGCCTGGGTGACGGGCGCCGACCGTGGGCTGGGAGAGCGCGTGGCTAT
CAACCTCGCGGTCAACGGCGCCAAGGTTATCCTTTCAGGCTTGAGCCTCG
CCGAGCTCGAGCGCGTGCAGCGCCTGTGCATCCTCGCGTGGATGAAGGCC
GTCAACTGGGAAATCTCAAAGGCGGTAACCAAGGGCTGGACCAGGTTGGA
CCGCGCCCTGGTGCTGCCTCTCGACGTGCGGGACGACTTCATCCTCCCCG
ACGCCGCGAGAAACGCCGAGTCCATGGTGGGGCGCCCGATCGACATGGTC
TTCCACTGTGCGGGAACGGACGTGGTGGCGGGGTCGAAAGGCGTCATCGG
GGTGGATCCCGCCGTCAATCACGAGGCCAGACACGTTCAGGTCATGGAAG
CGATTCTCTGGGGGGCCGTGGGGTTAACAAAGGCGGTCCTACCGAGCATG
CTTGACAGACAAGAAGGCCACATCGTCGCCATAGCCGAGGGGAGTTCTCT
TCTGAGGACTCCAGAGGGACGATCCGCCGAAGCGGCGTCGCGTCACGCCG
TGCGAGGTTACTTCGACAGCCTTCGGGCAGAGGTGGCACGAGACCGCATC
AAGGTCACCGTGGTGCATCCAGGTCCCATGAAACCGTTCGCGACTCAC
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