mRNA_A-nodosum_M_contig879.14.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A6H5JSY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY9_9PHAE) HSP 1 Score: 217 bits (553), Expect = 1.750e-64 Identity = 119/214 (55.61%), Postives = 143/214 (66.82%), Query Frame = 1
Query: 1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGS-------KGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEA--ASRHAVRGYFDSLRAEVARDRIKVTVV 615
V WVTGAD G GE++AINLAVNGA+VILSG SL ELERVQRLCILAWMKAV+WE+ A+ +G TRLDR +++PLD RD FIL AA AE M+ RP+ MVFHC G VVAG +G + V+ A + L GA+ LTKAVLPSMLD QEGH+V + S E S +S+HA RGYFD LR EV+RD +K+T V
Sbjct: 241 VVWVTGADHGFGEQMAINLAVNGARVILSGTSLEELERVQRLCILAWMKAVDWELLDAILEGLTRLDRVMIMPLDARDTFILDRAASKAEEMLDRPVGMVFHCQGGGVVAGEWDEEEEEEGDLDVEDASGN-----------LRGAIALTKAVLPSMLDEQEGHLVVLGGDDSFASREETSSPAGVVSSKHAARGYFDRLRTEVSRDGVKITTV 443
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: D8LHS3_ECTSI (Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS3_ECTSI) HSP 1 Score: 218 bits (556), Expect = 2.410e-64 Identity = 123/210 (58.57%), Postives = 146/210 (69.52%), Query Frame = 1
Query: 1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAI--LWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEA---ASRHAVRGYFDSLRAEVARDRIKVTVV 615
VAWVTGAD GLGE++AINLAVNGA+VILSG SL ELERVQRLCILAWMKAV+WE+ A+ +G TRLDR +++PLDVRD FIL A R AE M+ RP+ MVFHC G VVAG D +EA L GA+ LTKAVLPSMLD QEGH+V + G + E S+ A +S+HA RGYFD LR EV+RD +KVT +
Sbjct: 305 VAWVTGADHGLGEQMAINLAVNGARVILSGTSLEELERVQRLCILAWMKAVDWELLDAILEGLTRLDRVMIMPLDVRDTFILDHATRKAEDMLDRPVGMVFHCQGGGVVAGEWDE--EDEXXXXXXXXDLDLEASGNLRGAISLTKAVLPSMLDEQEGHLVVLG-GDDFFTSREETSSPAGVVSSKHAARGYFDRLRREVSRDGVKVTTL 511
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A836CN07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN07_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.770e-42 Identity = 92/214 (42.99%), Postives = 131/214 (61.21%), Query Frame = 1
Query: 7 WVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARN--------AESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 624
WVTGA G+G++VAI A GA V+L+G +L EL RVQR C+ AW +A + ++A +GW + A + P+DVRD P+A + AE +GRPID++ HCAG V+ V+ + + E VM+A GA LT+A LP+ML R G + A++ G+ + P R++ AA++HAVRGYFD+LRAEVA + VTVV+PG
Sbjct: 115 WVTGASSGIGKQVAIQAAAAGAHVLLTGRNLEELARVQRACVAAWKRARRYTRARAFLEGWRPAEVAYLFPMDVRDTEFAPEAVKRMAYVSMEAAEERLGRPIDVLIHCAG---VSSRAPVLETSTSTDRE-----VMDASFLGAAALTRAALPAMLRRGGGAVAAVS-GAHGVAAPARRASNAAAKHAVRGYFDALRAEVAAHGVTVTVVYPG 319
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A7Y5MRL2_9BACT (SDR family oxidoreductase n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y5MRL2_9BACT) HSP 1 Score: 121 bits (304), Expect = 2.970e-30 Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 1
Query: 1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 624
V W+TGA G+GE +A A GA++ILS + AELERV++ C T + L+LPLDV +P+A + A + G+ ID++ + AG S+ + D A + R +M+ G V +TKAVLP ML R+ G IV I+ + P GRSA AAS+HA+ G+FD+LRAEV R IKVT++ PG
Sbjct: 7 VVWITGASSGIGEHLAYAFATQGARLILSSRNEAELERVKKRC--------------------TAAAQVLLLPLDVAQFGTIPEAVQKATAQFGQ-IDVLVNNAGI-----SQRALAADSAFEVDQR---IMDVNFLGTVAMTKAVLPLMLARRSGQIVVISSVMGKVGFP-GRSAYAASKHALHGFFDTLRAEVFRHNIKVTILCPG 184
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A3M0CWT6_9PROT (Short-subunit dehydrogenase n=1 Tax=Eilatimonas milleporae TaxID=911205 RepID=A0A3M0CWT6_9PROT) HSP 1 Score: 117 bits (292), Expect = 2.060e-28 Identity = 75/206 (36.41%), Postives = 116/206 (56.31%), Query Frame = 1
Query: 7 WVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 624
W+TGA G+GE +A+ A G +ILS EL RV+ LC V +G T + ++LPLDV ++ LPD + A++ GR IDM+ + AG S+ + +D + A + ++ E ++G + LTKAVLP ML+++ GH+ A + + P+ R+ A++HA+ G+FD+LRAEVA IKVT + PG
Sbjct: 9 WITGASSGIGEALALEFASRGTPLILSARREDELARVKNLC---------------VERG-TEANAVMILPLDVTNETALPDIVQTAKAFTGR-IDMLINNAGI-----SQRALCIDTDM---ATYRRLFEVDVFGQIALTKAVLPIMLEQESGHLAVTASVAGKVGAPQ-RTGYCAAKHAMMGFFDALRAEVAHRGIKVTTITPG 188
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A2D7NW15_9BACT (Short chain dehydrogenase n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A2D7NW15_9BACT) HSP 1 Score: 116 bits (290), Expect = 3.640e-28 Identity = 75/211 (35.55%), Postives = 118/211 (55.92%), Query Frame = 1
Query: 1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPGPMK 633
+ WVTGA G+GE + L GAK+ILS EL+RV++ C A N E+ +L LD+ + L + + A S +G PID++ HC G ++ ++ AV+ Q+ME +G + ++K +LPSM++R++GH V I + ++ TP RSA AAS+HA+ G+FD+LRAE +D I V+++ PG +K
Sbjct: 8 IIWVTGASSGIGEALVYQLNQLGAKLILSARRTNELKRVKKAC------AKNGEVH--------------LLTLDLSESKTLEEKCKQALSFMG-PIDLIIHCGG---ISQRDKIMNTSLAVDR-----QIMEVNYFGTIAISKLLLPSMVNRKKGHHVIITSATGIISTPL-RSAYAASKHALHGFFDALRAEHEKDNIYVSLICPGYIK 188
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A1Z8QRI7_9BACT (Short chain dehydrogenase n=2 Tax=unclassified Flammeovirgaceae TaxID=340671 RepID=A0A1Z8QRI7_9BACT) HSP 1 Score: 115 bits (289), Expect = 5.120e-28 Identity = 75/211 (35.55%), Postives = 119/211 (56.40%), Query Frame = 1
Query: 1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPGPMK 633
+ WVTGA G+GE + L GAK+ILS ++ELERV+ C N E++ +L LD+ + L + + A +++G PID++ HC G ++ V+ AV+ ++ME +G + L+K +LPSM+ R++GH V I + ++ TP RSA AAS+HA+ G+FD+LRAE +D I V+++ PG +K
Sbjct: 8 IIWVTGASSGIGEALVYQLHQLGAKLILSARRVSELERVKNAC------TENSEVN--------------LLRLDLSEAETLEEKCKQASALMG-PIDLIIHCGG---ISQRDKVMNTSLAVDR-----RIMEINYFGTISLSKFLLPSMVTRKQGHHVVITSVTGIISTPL-RSAYAASKHALHGFFDALRAEHEKDNINVSLICPGYIK 188
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A399ZGI0_9CHLR (Short chain dehydrogenase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A399ZGI0_9CHLR) HSP 1 Score: 114 bits (286), Expect = 1.360e-27 Identity = 75/209 (35.89%), Postives = 110/209 (52.63%), Query Frame = 1
Query: 1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQ-VMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 624
+ W+TGA G+GE +A GA++ILS AELERV+ C+ R +LPLD D +P+ + A ++ G D++ + G+ V E +Q V + +GAV LTKAVLP ML+R+ GHIV ++ + L P+ +A AS+HA++GYF+SLRAEVAR +KVT++ PG
Sbjct: 9 IIWLTGASSGIGEALAYEFCQRGARLILSARRAAELERVRAQCVDP--------------------TRVKILPLDAADLENIPEKGKQARALFGT----------LDILVNNAGIAQRGRVVETEMLALQRVFQVNFFGAVALTKAVLPEMLERRAGHIVVVSSLTGKLPVPK-HAAYCASKHALQGYFNSLRAEVARQGVKVTLLLPG 186
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A3B8IXS5_9BACT (Short chain dehydrogenase n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8IXS5_9BACT) HSP 1 Score: 114 bits (285), Expect = 1.990e-27 Identity = 81/208 (38.94%), Postives = 114/208 (54.81%), Query Frame = 1
Query: 1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPG 624
V WVTGA G+GE +A L+ GAKVI+S AELERV+ LC D+ VLPLD+ + + + + A + GR +DM+ + G S+ + V+ AV+ R +M+ G V LTKA+LP ML R+ GHIVA++ + TP RS A S+HA+ G+FDSLRAE+ R+ +KV +V PG
Sbjct: 8 VVWVTGASSGIGEGLATELSKAGAKVIISARREAELERVKALC--------------------AHPDQVAVLPLDLVELEDMEEKVKAAIAAFGR-VDMLINNGGI-----SQRDLTVNTAVSVYER---IMKVNYLGTVALTKAILPHMLARKSGHIVAVSSLTGKFGTPY-RSGYAGSKHALHGFFDSLRAEIWRENVKVLMVAPG 185
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Match: A0A7C7FRA3_9PROT (SDR family oxidoreductase n=2 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7C7FRA3_9PROT) HSP 1 Score: 113 bits (283), Expect = 3.920e-27 Identity = 84/211 (39.81%), Postives = 111/211 (52.61%), Query Frame = 1
Query: 1 VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAVNWEISKAVTKGWTRLDRALVLPLDVRDDFILPDAARNAESMVGRPIDMVFHCAGTDVVAGSKGVIGVDPAVNHEARHVQVMEAILWGAVGLTKAVLPSMLDRQEGHIVAIAEGSSLLRTPEGRSAEAASRHAVRGYFDSLRAEVARDRIKVTVVHPGPMK 633
V W+TGA G+GE +A GA +ILS +ELERV C K EI V PLD+ + DA+ + + R ID++ +CAG +A V+ + V H+ +M+ +GAV LTKAVLPSM+ R G IV I + L TP RS AAS+HAV G+FD LRAEVA + I VT V PGP++
Sbjct: 7 VVWITGASSGIGEALAYAFYEEGANLILSARRKSELERVMSEC-----KNGEGEI--------------YVQPLDMSQTEKMTDASNSVVDRLSR-IDILVNCAG---IAQRSSVLNAELHVFHK-----IMQVNFFGAVALTKAVLPSMVHRSSGQIVIIGSPAGLFGTPL-RSGYAASKHAVHGFFDCLRAEVAGNGIFVTNVIPGPIR 188 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig879.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig879.14.1 >prot_A-nodosum_M_contig879.14.1 ID=prot_A-nodosum_M_contig879.14.1|Name=mRNA_A-nodosum_M_contig879.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=216bp VAWVTGADRGLGERVAINLAVNGAKVILSGLSLAELERVQRLCILAWMKAback to top mRNA from alignment at A-nodosum_M_contig879:202802..206659+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig879.14.1 ID=mRNA_A-nodosum_M_contig879.14.1|Name=mRNA_A-nodosum_M_contig879.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3858bp|location=Sequence derived from alignment at A-nodosum_M_contig879:202802..206659+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig879:202802..206659+ >mRNA_A-nodosum_M_contig879.14.1 ID=mRNA_A-nodosum_M_contig879.14.1|Name=mRNA_A-nodosum_M_contig879.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=648bp|location=Sequence derived from alignment at A-nodosum_M_contig879:202802..206659+ (Ascophyllum nodosum dioecious)back to top |