prot_A-nodosum_M_contig8782.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8782.3.1
Unique Nameprot_A-nodosum_M_contig8782.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length73
Homology
BLAST of mRNA_A-nodosum_M_contig8782.3.1 vs. uniprot
Match: A0A6H5KRH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 2.040e-21
Identity = 46/76 (60.53%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    1 MPDVAALRESWSDSSGGGTSDQMREKTPQE----LLSALLAWCQAVCHGYCVPVNNFTTSFADGRALCLLVHYYHP 72
            +PDVAA+ E W + +G                  LLSALL WCQAVCHGY VPV NFTTSFADGRALCLL+HYYHP
Sbjct:  606 LPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHP 681          
BLAST of mRNA_A-nodosum_M_contig8782.3.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 2.040e-21
Identity = 46/76 (60.53%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    1 MPDVAALRESWSDSSGGGTSDQMREKTPQE----LLSALLAWCQAVCHGYCVPVNNFTTSFADGRALCLLVHYYHP 72
            +PDVAA+ E W + +G                  LLSALL WCQAVCHGY VPV NFTTSFADGRALCLL+HYYHP
Sbjct:  750 LPDVAAMVEGWEEKAGXXXXXXXXXXXXXXXXXXLLSALLVWCQAVCHGYGVPVRNFTTSFADGRALCLLLHYYHP 825          
BLAST of mRNA_A-nodosum_M_contig8782.3.1 vs. uniprot
Match: A0A835Z978_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z978_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 9.810e-16
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 0
Query:   30 ELLSALLAWCQAVCHGYCVPVNNFTTSFADGRALCLLVHYYHP 72
            +L  AL  W QAVCHGY VP++NFTTSFADGRALCLLVH+YHP
Sbjct:  767 DLQQALAVWAQAVCHGYGVPIHNFTTSFADGRALCLLVHHYHP 809          
BLAST of mRNA_A-nodosum_M_contig8782.3.1 vs. uniprot
Match: A0A3R7A519_9STRA (Calponin-homology (CH) domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7A519_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.920e-13
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   18 GTSDQMREKTPQELLSALLAWCQAVCHGYCVPVNNFTTSFADGRALCLLVHYYHP 72
            GT+    +KT + +   LL WC+ VC  Y VP+ N+T SFADG+ALCL+VHYYHP
Sbjct:  516 GTNHFAIDKTREPIAWHLLEWCRVVCANYNVPIRNYTASFADGKALCLMVHYYHP 570          
BLAST of mRNA_A-nodosum_M_contig8782.3.1 vs. uniprot
Match: A0A024TRX6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TRX6_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.970e-13
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   18 GTSDQMREKTPQELLSALLAWCQAVCHGYCVPVNNFTTSFADGRALCLLVHYYHP 72
            GT+    +KT + +   LL WC+ VC  Y VP+ N+T SFADG+ALCL+VHYYHP
Sbjct:  705 GTNHFAIDKTREPIAWHLLEWCRVVCANYNVPIRNYTASFADGKALCLMVHYYHP 759          
BLAST of mRNA_A-nodosum_M_contig8782.3.1 vs. uniprot
Match: A0A485LR02_9STRA (Aste57867_24058 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LR02_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.690e-13
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0
Query:   25 EKTPQELLSALLAWCQAVCHGYCVPVNNFTTSFADGRALCLLVHYYHP 72
            +KT + +   LL WC+ VC  Y VP+ NFT SFADG+ALCL+VHYYHP
Sbjct:  670 DKTKEPIAWLLLEWCRVVCAQYNVPIRNFTASFADGKALCLMVHYYHP 717          
BLAST of mRNA_A-nodosum_M_contig8782.3.1 vs. uniprot
Match: A0A8K1FN67_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FN67_PYTOL)

HSP 1 Score: 72.8 bits (177), Expect = 2.700e-13
Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   19 TSDQMREKTPQELLSALLAWCQAVCHGYCVPVNNFTTSFADGRALCLLVHYYHP 72
            T D+  +    E+   LL WC+AVC  Y +PV +FT SFADGRALC L+HYYHP
Sbjct:  810 TPDEENQGIDAEVSELLLEWCRAVCANYSIPVTDFTESFADGRALCYLLHYYHP 863          
BLAST of mRNA_A-nodosum_M_contig8782.3.1 vs. uniprot
Match: A0A6G0WI66_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WI66_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 3.680e-13
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0
Query:   25 EKTPQELLSALLAWCQAVCHGYCVPVNNFTTSFADGRALCLLVHYYHP 72
            +KT + +   LL WC+ VC  Y VP+ NFT SFADG+ALCL+VHYYHP
Sbjct:  645 DKTKEPIAWLLLEWCRLVCAHYNVPIRNFTASFADGKALCLMVHYYHP 692          
BLAST of mRNA_A-nodosum_M_contig8782.3.1 vs. uniprot
Match: UPI0006B0F883 (abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0F883)

HSP 1 Score: 70.9 bits (172), Expect = 1.290e-12
Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 0
Query:   30 ELLSALLAWCQAVCHGYCVPVNNFTTSFADGRALCLLVHYYHP 72
            E L  LL WCQAVC  Y +PV NFT SF+DGRALC L+H+YHP
Sbjct: 1068 ESLDFLLKWCQAVCTQYNIPVENFTVSFSDGRALCYLIHHYHP 1110          
BLAST of mRNA_A-nodosum_M_contig8782.3.1 vs. uniprot
Match: A0A397G091_9STRA (Calponin-homology (CH) domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397G091_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.270e-12
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0
Query:   25 EKTPQELLSALLAWCQAVCHGYCVPVNNFTTSFADGRALCLLVHYYHP 72
            +K  + +   LL WC+ VC  Y VP+ NFT SFADG+ALCL+VHYYHP
Sbjct:   42 DKLKEPIAWHLLEWCRVVCATYHVPIRNFTASFADGKALCLMVHYYHP 89          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8782.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRH5_9PHAE2.040e-2160.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLN9_ECTSI2.040e-2160.53Similar to asp (Abnormal spindle)-like, microcepha... [more]
A0A835Z978_9STRA9.810e-1676.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3R7A519_9STRA1.920e-1354.55Calponin-homology (CH) domain-containing protein n... [more]
A0A024TRX6_9STRA1.970e-1354.55Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A485LR02_9STRA2.690e-1360.42Aste57867_24058 protein n=1 Tax=Aphanomyces stella... [more]
A0A8K1FN67_PYTOL2.700e-1355.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0WI66_9STRA3.680e-1360.42Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
UPI0006B0F8831.290e-1267.44abnormal spindle-like microcephaly-associated prot... [more]
A0A397G091_9STRA2.270e-1258.33Calponin-homology (CH) domain-containing protein n... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001715Calponin homology domainPFAMPF00307CHcoord: 33..72
e-value: 4.1E-8
score: 33.4
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 29..73
score: 12.792471
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 23..73
e-value: 6.8E-16
score: 60.0
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 33..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR22590:SF5IQ MOTIF, EF-HAND BINDING SITEcoord: 29..72
NoneNo IPR availablePANTHERPTHR22590UNCHARACTERIZEDcoord: 29..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8782contigA-nodosum_M_contig8782:16956..17174 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8782.3.1mRNA_A-nodosum_M_contig8782.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8782 16956..17174 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8782.3.1 ID=prot_A-nodosum_M_contig8782.3.1|Name=mRNA_A-nodosum_M_contig8782.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=73bp
MPDVAALRESWSDSSGGGTSDQMREKTPQELLSALLAWCQAVCHGYCVPV
NNFTTSFADGRALCLLVHYYHPW
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001715CH-domain
IPR036872CH_dom_sf