prot_A-nodosum_M_contig876.21.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig876.21.1
Unique Nameprot_A-nodosum_M_contig876.21.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length385
Homology
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BLAST of mRNA_A-nodosum_M_contig876.21.1 vs. uniprot
Match: D8LTN6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN6_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 7.170e-19
Identity = 83/169 (49.11%), Postives = 108/169 (63.91%), Query Frame = 0 
Query:  111 RGGGPTDNAPWEDRPY----TYEHPPQPPMGVVVGAGVVGAVTGHIVFRSLLVSVGLGIGAMGLAATSDSRFGELARASGRVAVAAVHRTAELNDRYHLTAKVADGTRTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTKAGNALGLGLDKITEALSPP 275
            RGGGP+ + P + R        +    PP+  VVGAG VG + G +VF+SLL+S GLG+ AM +AA+S    G++AR+SGR+AVAA  R A+LN+RYH T ++ +G +                 XXXXXXXXXXXXXXXXXXXXX    AG A+  GLDK+ EAL+PP
Sbjct:   28 RGGGPSGSPPSKTRATGSRGLSDDDDPPPIREVVGAGAVGVLAGQLVFQSLLISAGLGVTAMTIAASSADGAGDIARSSGRMAVAAFDRGADLNERYHFTERLVNGAKITGWRLKQFDQEHAVVHXXXXXXXXXXXXXXXXXXXXXXXXXAGEAMTSGLDKLAEALTPP 196
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig876.21.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTN6_ECTSI7.170e-1949.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig876contigA-nodosum_M_contig876:194635..200319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig876.21.1mRNA_A-nodosum_M_contig876.21.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig876 194602..200469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig876.21.1 ID=prot_A-nodosum_M_contig876.21.1|Name=mRNA_A-nodosum_M_contig876.21.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=385bp
MAVATARSSCQEQETSLWITDRIGQALCVSIPRCLPCVRCVKITLDRTGG
KRRRLARKTEVSSGGFQDRLLCRTAHRETQTMAAAMAYLAASPSAPAAVV
ARLTAALISVRGGGPTDNAPWEDRPYTYEHPPQPPMGVVVGAGVVGAVTG
HIVFRSLLVSVGLGIGAMGLAATSDSRFGELARASGRVAVAAVHRTAELN
DRYHLTAKVADGTRTAAHRIRKFDQEHAVVHRATEGVKQVWRGLKEYDRK
HGISTKAGNALGLGLDKITEALSPPAPDTTSTDPGLSQAPRGSGNYPRYE
SPRRETRRGRETGGDFGRGQDRSGRGRRSTGSADRGRRNDAAKDEAKPGV
PSAEESYLWGKWGWWSAPPGRDKGYGKGVVDEDW*
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